RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 ZFYVE27Q5T4F4 411 aa3.8□□□□□ -1.8
CBWD3-209ENST00000614377 C1QTNF12Q5T7M4 302 aa3.8□□□□□ -1.8
CBWD3-209ENST00000614377 SMYD5Q6GMV2 418 aa3.8□□□□□ -1.8
CBWD3-209ENST00000614377 CLEC4GQ6UXB4 293 aa3.8□□□□□ -1.8
CBWD3-209ENST00000614377 MTERF4Q7Z6M4 381 aaKnown RBP3.8□□□□□ -1.8
CBWD3-209ENST00000614377 METTL3Q86U44 580 aaKnown RBP3.8□□□□□ -1.8
CBWD3-209ENST00000614377 ZNF513Q8N8E2 541 aaPredicted RBP3.8□□□□□ -1.8
CBWD3-209ENST00000614377 GOPCQ9HD26 462 aa3.8□□□□□ -1.8
CBWD3-209ENST00000614377 NXF1Q9UBU9 619 aaKnown RBP3.8□□□□□ -1.8
CBWD3-209ENST00000614377 CEP83Q9Y592 693 aa3.8□□□□□ -1.8
CBWD3-209ENST00000614377 OATP04181 439 aa3.8□□□□□ -1.8
CBWD3-209ENST00000614377 HELBQ8NG08 1087 aaPredicted RBP3.8□□□□□ -1.8
CBWD3-209ENST00000614377 IRF7Q92985 503 aa3.8□□□□□ -1.8
CBWD3-209ENST00000614377 MRRFQ96E11 262 aaKnown RBP3.8□□□□□ -1.8
CBWD3-209ENST00000614377 KIAA1522Q9P206 1035 aaPredicted RBP3.8□□□□□ -1.8
CBWD3-209ENST00000614377 USTQ9Y2C2 406 aa3.8□□□□□ -1.8
CBWD3-209ENST00000614377 TULP2O00295 520 aa3.79□□□□□ -1.8
CBWD3-209ENST00000614377 SH3BP5O60239 455 aa3.79□□□□□ -1.8
CBWD3-209ENST00000614377 SSR1P43307 286 aaKnown RBP3.79□□□□□ -1.8
CBWD3-209ENST00000614377 CT47A1Q5JQC4 288 aaPredicted RBP3.79□□□□□ -1.8
CBWD3-209ENST00000614377 EP400NLQ6ZTU2 488 aa3.79□□□□□ -1.8
CBWD3-209ENST00000614377 PNISRQ8TF01 805 aaKnown RBP3.79□□□□□ -1.8
CBWD3-209ENST00000614377 EFCC1Q9HA90 598 aa3.79□□□□□ -1.8
CBWD3-209ENST00000614377 COMMD10Q9Y6G5 202 aa3.79□□□□□ -1.8
CBWD3-209ENST00000614377 CUX2O14529 1486 aa3.79□□□□□ -1.8
CBWD3-209ENST00000614377 ALDH1A1P00352 501 aa3.79□□□□□ -1.8
CBWD3-209ENST00000614377 LORP23490 312 aaPredicted RBP3.79□□□□□ -1.8
CBWD3-209ENST00000614377 POLD1P28340 1107 aa3.79□□□□□ -1.8
CBWD3-209ENST00000614377 ZC3H6P61129 1189 aaKnown RBP3.79□□□□□ -1.8
CBWD3-209ENST00000614377 PDE4DQ08499 809 aa3.79□□□□□ -1.8
CBWD3-209ENST00000614377 LMOD3Q0VAK6 560 aa3.79□□□□□ -1.8
CBWD3-209ENST00000614377 FOXD4Q12950 439 aaPredicted RBP3.79□□□□□ -1.8
CBWD3-209ENST00000614377 CCDC24Q8N4L8 307 aa3.79□□□□□ -1.8
CBWD3-209ENST00000614377 CHMP4CQ96CF2 233 aa3.79□□□□□ -1.8
CBWD3-209ENST00000614377 FAM210AQ96ND0 272 aa3.79□□□□□ -1.8
CBWD3-209ENST00000614377 RBM28Q9NW13 759 aaKnown RBP3.79□□□□□ -1.8
CBWD3-209ENST00000614377 CEP126Q9P2H0 1117 aa3.79□□□□□ -1.8
CBWD3-209ENST00000614377 KIF16BQ96L93 1317 aa3.79□□□□□ -1.8
CBWD3-209ENST00000614377 BRICD5Q6PL45 260 aa3.78□□□□□ -1.8
CBWD3-209ENST00000614377 NOP9Q86U38 636 aaKnown RBP3.78□□□□□ -1.8
CBWD3-209ENST00000614377 FRAT1Q92837 279 aaPredicted RBP3.78□□□□□ -1.8
CBWD3-209ENST00000614377 KRTAP4-2Q9BYR5 136 aa3.78□□□□□ -1.8
CBWD3-209ENST00000614377 ERBB4Q15303 1308 aa3.78□□□□□ -1.8
CBWD3-209ENST00000614377 COPB2P35606 906 aa3.78□□□□□ -1.8
CBWD3-209ENST00000614377 RHBDL3P58872 404 aa3.78□□□□□ -1.8
CBWD3-209ENST00000614377 SENP7Q9BQF6 1050 aa3.78□□□□□ -1.8
CBWD3-209ENST00000614377 REPIN1Q9BWE0 567 aaKnown RBP3.78□□□□□ -1.8
CBWD3-209ENST00000614377 CCDC194A0A1B0GVG4 234 aa3.78□□□□□ -1.81
CBWD3-209ENST00000614377 MAP4K4O95819 1239 aaPredicted RBP3.78□□□□□ -1.81
CBWD3-209ENST00000614377 CAPN2P17655 700 aa3.78□□□□□ -1.81
CBWD3-209ENST00000614377 TNNT2P45379 298 aaPredicted RBP3.78□□□□□ -1.81
CBWD3-209ENST00000614377 CD151P48509 253 aa3.78□□□□□ -1.81
CBWD3-209ENST00000614377 RIPK4P57078 832 aa3.78□□□□□ -1.81
CBWD3-209ENST00000614377 C11orf91Q3C1V1 193 aa3.78□□□□□ -1.81
CBWD3-209ENST00000614377 HSP90AB2PQ58FF8 381 aa3.78□□□□□ -1.81
CBWD3-209ENST00000614377 RC3H1Q5TC82 1133 aaKnown RBP3.78□□□□□ -1.81
CBWD3-209ENST00000614377 SMC3Q9UQE7 1217 aa3.78□□□□□ -1.81
CBWD3-209ENST00000614377 RAD50Q92878 1312 aa3.77□□□□□ -1.81
CBWD3-209ENST00000614377 KLHL33A6NCF5 533 aa3.77□□□□□ -1.81
CBWD3-209ENST00000614377 TRIM66O15016 1216 aa3.77□□□□□ -1.81
CBWD3-209ENST00000614377 PEX14O75381 377 aa3.77□□□□□ -1.81
CBWD3-209ENST00000614377 CCDC172P0C7W6 258 aa3.77□□□□□ -1.81
CBWD3-209ENST00000614377 MCM6Q14566 821 aa3.77□□□□□ -1.81
CBWD3-209ENST00000614377 MSS51Q4VC12 460 aa3.77□□□□□ -1.81
CBWD3-209ENST00000614377 ZNF280DQ6N043 979 aa3.77□□□□□ -1.81
CBWD3-209ENST00000614377 GIMAP6Q6P9H5 292 aa3.77□□□□□ -1.81
CBWD3-209ENST00000614377 KRTAP9-9Q9BYP9 154 aa3.77□□□□□ -1.81
CBWD3-209ENST00000614377 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
CBWD3-209ENST00000614377 CCDC189A1A4V9 331 aa3.77□□□□□ -1.81
CBWD3-209ENST00000614377 IPO8O15397 1037 aaKnown RBP3.77□□□□□ -1.81
CBWD3-209ENST00000614377 AMOTL1Q8IY63 956 aa3.77□□□□□ -1.81
CBWD3-209ENST00000614377 CCDC94Q9BW85 323 aaPredicted RBP3.77□□□□□ -1.81
CBWD3-209ENST00000614377 CDCA7Q9BWT1 371 aaPredicted RBP3.77□□□□□ -1.81
CBWD3-209ENST00000614377 FAM117AQ9C073 453 aa3.77□□□□□ -1.81
CBWD3-209ENST00000614377 DHX16O60231 1041 aaKnown RBP3.76□□□□□ -1.81
CBWD3-209ENST00000614377 GCGRP47871 477 aa3.76□□□□□ -1.81
CBWD3-209ENST00000614377 SKOR1P84550 965 aa3.76□□□□□ -1.81
CBWD3-209ENST00000614377 ZNF662Q6ZS27 426 aa3.76□□□□□ -1.81
CBWD3-209ENST00000614377 TRIM46Q7Z4K8 759 aa3.76□□□□□ -1.81
CBWD3-209ENST00000614377 CCAR1Q8IX12 1150 aaKnown RBP3.76□□□□□ -1.81
CBWD3-209ENST00000614377 KRI1Q8N9T8 703 aaKnown RBP3.76□□□□□ -1.81
CBWD3-209ENST00000614377 ATL2Q8NHH9 583 aa3.76□□□□□ -1.81
CBWD3-209ENST00000614377 SYNPO2Q9UMS6 1093 aa3.76□□□□□ -1.81
CBWD3-209ENST00000614377 MRVI1Q9Y6F6 885 aa3.76□□□□□ -1.81
CBWD3-209ENST00000614377 IVNS1ABPQ9Y6Y0 642 aa3.76□□□□□ -1.81
CBWD3-209ENST00000614377 ESPNB1AK53 854 aa3.76□□□□□ -1.81
CBWD3-209ENST00000614377 CAPN5O15484 640 aaPredicted RBP3.76□□□□□ -1.81
CBWD3-209ENST00000614377 IGBP1P78318 339 aa3.76□□□□□ -1.81
CBWD3-209ENST00000614377 SWAP70Q9UH65 585 aa3.76□□□□□ -1.81
CBWD3-209ENST00000614377 FRMD4BQ9Y2L6 1034 aa3.76□□□□□ -1.81
CBWD3-209ENST00000614377 TMA7Q9Y2S6 64 aaKnown RBP3.76□□□□□ -1.81
CBWD3-209ENST00000614377 RPGRIP1LQ68CZ1 1315 aa3.76□□□□□ -1.81
CBWD3-209ENST00000614377 SYNRGQ9UMZ2 1314 aa3.76□□□□□ -1.81
CBWD3-209ENST00000614377 PLEKHG3A1L390 1219 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 H3BM21 787 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 EPB41L2O43491 1005 aaKnown RBP3.75□□□□□ -1.81
CBWD3-209ENST00000614377 CT47B1P0C2W7 299 aaPredicted RBP3.75□□□□□ -1.81
CBWD3-209ENST00000614377 C4orf46Q504U0 113 aa3.75□□□□□ -1.81
CBWD3-209ENST00000614377 MYCBPQ99417 103 aaPredicted RBP3.75□□□□□ -1.81
CBWD3-209ENST00000614377 NCAPGQ9BPX3 1015 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms