RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 IGSF1Q8N6C5 1336 aa24.47■■□□□ 1.51
SMN2-213ENST00000614240 MORC1Q86VD1 984 aa24.47■■□□□ 1.51
SMN2-213ENST00000614240 RBM42Q9BTD8 480 aaKnown RBP24.47■■□□□ 1.51
SMN2-213ENST00000614240 WWC3Q9ULE0 1092 aa24.47■■□□□ 1.51
SMN2-213ENST00000614240 DCAF5Q96JK2 942 aa24.46■■□□□ 1.51
SMN2-213ENST00000614240 ERVV-2B6SEH9 535 aa24.45■■□□□ 1.5
SMN2-213ENST00000614240 ZNF530Q6P9A1 599 aaPredicted RBP24.45■■□□□ 1.5
SMN2-213ENST00000614240 RTCBQ9Y3I0 505 aaKnown RBP24.44■■□□□ 1.5
SMN2-213ENST00000614240 PLEKHG2Q9H7P9 1386 aa24.43■■□□□ 1.5
SMN2-213ENST00000614240 UBR3Q6ZT12 1888 aa24.43■■□□□ 1.5
SMN2-213ENST00000614240 CABP4P57796 275 aa24.43■■□□□ 1.5
SMN2-213ENST00000614240 AMOTQ4VCS5 1084 aa24.43■■□□□ 1.5
SMN2-213ENST00000614240 TRAPPC3LQ5T215 181 aa24.43■■□□□ 1.5
SMN2-213ENST00000614240 CCER1Q8TC90 406 aaPredicted RBP24.43■■□□□ 1.5
SMN2-213ENST00000614240 MMP10P09238 476 aa24.41■■□□□ 1.5
SMN2-213ENST00000614240 C1orf141Q5JVX7 400 aa24.41■■□□□ 1.5
SMN2-213ENST00000614240 KNSTRNQ9Y448 316 aa24.41■■□□□ 1.5
SMN2-213ENST00000614240 ATP10DQ9P241 1426 aa24.41■■□□□ 1.5
SMN2-213ENST00000614240 MTHFSP49914 203 aa24.4■■□□□ 1.5
SMN2-213ENST00000614240 UTRNP46939 3433 aa24.4■■□□□ 1.5
SMN2-213ENST00000614240 GPBP1L1Q9HC44 474 aaPredicted RBP24.39■■□□□ 1.49
SMN2-213ENST00000614240 NLGN1Q8N2Q7 840 aa24.38■■□□□ 1.49
SMN2-213ENST00000614240 RC3H1Q5TC82 1133 aaKnown RBP24.37■■□□□ 1.49
SMN2-213ENST00000614240 AEBP1Q8IUX7 1158 aa24.37■■□□□ 1.49
SMN2-213ENST00000614240 ZNF526Q8TF50 670 aaPredicted RBP24.37■■□□□ 1.49
SMN2-213ENST00000614240 SLC4A9Q96Q91 983 aa24.37■■□□□ 1.49
SMN2-213ENST00000614240 KDRP35968 1356 aa24.37■■□□□ 1.49
SMN2-213ENST00000614240 RFC4P35249 363 aa24.36■■□□□ 1.49
SMN2-213ENST00000614240 SULT6B1Q6IMI4 303 aa24.36■■□□□ 1.49
SMN2-213ENST00000614240 PTCD1O75127 700 aaKnown RBP24.35■■□□□ 1.49
SMN2-213ENST00000614240 ADRA2BP18089 450 aa24.35■■□□□ 1.49
SMN2-213ENST00000614240 ARHGEF1Q92888 912 aaKnown RBP24.35■■□□□ 1.49
SMN2-213ENST00000614240 RPS6KA4O75676 772 aa24.34■■□□□ 1.49
SMN2-213ENST00000614240 KDM6AO15550 1401 aaPredicted RBP24.34■■□□□ 1.49
SMN2-213ENST00000614240 CNTNAP4Q9C0A0 1308 aa24.34■■□□□ 1.49
SMN2-213ENST00000614240 NFATC2IPQ8NCF5 419 aa24.33■■□□□ 1.49
SMN2-213ENST00000614240 TGFB2P61812 414 aa24.31■■□□□ 1.48
SMN2-213ENST00000614240 PARP3Q9Y6F1 533 aa24.31■■□□□ 1.48
SMN2-213ENST00000614240 IL13P35225 146 aa24.3■■□□□ 1.48
SMN2-213ENST00000614240 CCDC87Q9NVE4 849 aa24.3■■□□□ 1.48
SMN2-213ENST00000614240 A0A0G2JLW4 131 aa24.29■■□□□ 1.48
SMN2-213ENST00000614240 GYS1P13807 737 aa24.29■■□□□ 1.48
SMN2-213ENST00000614240 BCS1LQ9Y276 419 aa24.29■■□□□ 1.48
SMN2-213ENST00000614240 ADCY9O60503 1353 aa24.29■■□□□ 1.48
SMN2-213ENST00000614240 CRKLP46109 303 aaKnown RBP24.28■■□□□ 1.48
SMN2-213ENST00000614240 CICQ96RK0 1608 aaPredicted RBP24.27■■□□□ 1.48
SMN2-213ENST00000614240 PXDNLA1KZ92 1463 aa24.26■■□□□ 1.47
SMN2-213ENST00000614240 ZNF831Q5JPB2 1677 aa24.26■■□□□ 1.47
SMN2-213ENST00000614240 AKAP4Q5JQC9 854 aa24.25■■□□□ 1.47
SMN2-213ENST00000614240 DPEP1P16444 411 aa24.24■■□□□ 1.47
SMN2-213ENST00000614240 AMER1Q5JTC6 1135 aaPredicted RBP24.24■■□□□ 1.47
SMN2-213ENST00000614240 ARHGAP27Q6ZUM4 889 aa24.24■■□□□ 1.47
SMN2-213ENST00000614240 C10orf71Q711Q0 1435 aa24.24■■□□□ 1.47
SMN2-213ENST00000614240 FCHSD2O94868 740 aa24.23■■□□□ 1.47
SMN2-213ENST00000614240 SRP68Q9UHB9 627 aaKnown RBP24.23■■□□□ 1.47
SMN2-213ENST00000614240 GOLGB1Q14789 3259 aaKnown RBP24.22■■□□□ 1.47
SMN2-213ENST00000614240 HMOX1P09601 288 aa24.22■■□□□ 1.47
SMN2-213ENST00000614240 COL5A3P25940 1745 aaPredicted RBP24.21■■□□□ 1.47
SMN2-213ENST00000614240 KIF7Q2M1P5 1343 aa24.21■■□□□ 1.47
SMN2-213ENST00000614240 SLC52A2Q9HAB3 445 aa24.21■■□□□ 1.47
SMN2-213ENST00000614240 LGR6Q9HBX8 967 aa24.2■■□□□ 1.46
SMN2-213ENST00000614240 C4AP0C0L4 1744 aa24.19■■□□□ 1.46
SMN2-213ENST00000614240 USP42Q9H9J4 1324 aaKnown RBP24.19■■□□□ 1.46
SMN2-213ENST00000614240 FKBP8Q14318 412 aa24.19■■□□□ 1.46
SMN2-213ENST00000614240 DNAJC10Q8IXB1 793 aa24.19■■□□□ 1.46
SMN2-213ENST00000614240 RNMTO43148 476 aaKnown RBP24.18■■□□□ 1.46
SMN2-213ENST00000614240 ZPR1O75312 459 aa24.18■■□□□ 1.46
SMN2-213ENST00000614240 HSPA6P17066 643 aa24.18■■□□□ 1.46
SMN2-213ENST00000614240 CC2D1BQ5T0F9 858 aaKnown RBP24.18■■□□□ 1.46
SMN2-213ENST00000614240 INTS5Q6P9B9 1019 aaKnown RBP24.18■■□□□ 1.46
SMN2-213ENST00000614240 N4BP2Q86UW6 1770 aaPredicted RBP24.18■■□□□ 1.46
SMN2-213ENST00000614240 DIAPH1O60610 1272 aaKnown RBP24.17■■□□□ 1.46
SMN2-213ENST00000614240 PIM2Q9P1W9 311 aa24.17■■□□□ 1.46
SMN2-213ENST00000614240 KIF13BQ9NQT8 1826 aa24.17■■□□□ 1.46
SMN2-213ENST00000614240 MYH14Q7Z406 1995 aaKnown RBP24.16■■□□□ 1.46
SMN2-213ENST00000614240 SLC39A6Q13433 755 aa24.16■■□□□ 1.46
SMN2-213ENST00000614240 KIF3CO14782 793 aa24.15■■□□□ 1.46
SMN2-213ENST00000614240 DDR1Q08345 913 aa24.15■■□□□ 1.46
SMN2-213ENST00000614240 CNGB1Q14028 1251 aaPredicted RBP24.15■■□□□ 1.46
SMN2-213ENST00000614240 MTHFSDQ2M296 383 aaKnown RBP24.14■■□□□ 1.45
SMN2-213ENST00000614240 USPL1Q5W0Q7 1092 aa24.14■■□□□ 1.45
SMN2-213ENST00000614240 KCNA3P22001 575 aa24.13■■□□□ 1.45
SMN2-213ENST00000614240 DALRD3Q5D0E6 543 aaKnown RBP24.13■■□□□ 1.45
SMN2-213ENST00000614240 SCN11AQ9UI33 1791 aa24.13■■□□□ 1.45
SMN2-213ENST00000614240 KIAA1551Q9HCM1 1747 aa24.13■■□□□ 1.45
SMN2-213ENST00000614240 CYP19A1P11511 503 aaPredicted RBP24.12■■□□□ 1.45
SMN2-213ENST00000614240 TJP1Q07157 1748 aa24.11■■□□□ 1.45
SMN2-213ENST00000614240 PER1O15534 1290 aaPredicted RBP24.11■■□□□ 1.45
SMN2-213ENST00000614240 SOS1Q07889 1333 aaPredicted RBP24.1■■□□□ 1.45
SMN2-213ENST00000614240 POLRMTO00411 1230 aaKnown RBP24.1■■□□□ 1.45
SMN2-213ENST00000614240 TM4SF1P30408 202 aa24.1■■□□□ 1.45
SMN2-213ENST00000614240 CHRNA5P30532 468 aa24.1■■□□□ 1.45
SMN2-213ENST00000614240 C9orf131Q5VYM1 1079 aa24.1■■□□□ 1.45
SMN2-213ENST00000614240 U2SURPO15042 1029 aaKnown RBP24.09■■□□□ 1.45
SMN2-213ENST00000614240 TTC5Q8N0Z6 440 aa24.09■■□□□ 1.45
SMN2-213ENST00000614240 NARFQ9UHQ1 456 aa24.08■■□□□ 1.45
SMN2-213ENST00000614240 NMRK2Q9NPI5 230 aa24.07■■□□□ 1.44
SMN2-213ENST00000614240 ZBTB1Q9Y2K1 713 aa24.07■■□□□ 1.44
SMN2-213ENST00000614240 MRC1P22897 1456 aa24.07■■□□□ 1.44
SMN2-213ENST00000614240 COL15A1P39059 1388 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms