RNA–Protein interactions for RNA: ENST00000614035.4

TNFAIP3-207, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-207ENST00000614035 ITPK1Q13572 414 aa24.01■■□□□ 1.43
TNFAIP3-207ENST00000614035 MSL1Q68DK7 614 aa24.01■■□□□ 1.43
TNFAIP3-207ENST00000614035 ZNF831Q5JPB2 1677 aa24.01■■□□□ 1.43
TNFAIP3-207ENST00000614035 SSFA2P28290 1259 aa24.01■■□□□ 1.43
TNFAIP3-207ENST00000614035 ATP6V1AP38606 617 aa24■■□□□ 1.43
TNFAIP3-207ENST00000614035 MTHFSP49914 203 aa24■■□□□ 1.43
TNFAIP3-207ENST00000614035 CHD4Q14839 1912 aa23.99■■□□□ 1.43
TNFAIP3-207ENST00000614035 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.99■■□□□ 1.43
TNFAIP3-207ENST00000614035 NLGN2Q8NFZ4 835 aa23.99■■□□□ 1.43
TNFAIP3-207ENST00000614035 NPC1L1Q9UHC9 1359 aa23.99■■□□□ 1.43
TNFAIP3-207ENST00000614035 C1orf141Q5JVX7 400 aa23.98■■□□□ 1.43
TNFAIP3-207ENST00000614035 PHF14O94880 888 aa23.97■■□□□ 1.43
TNFAIP3-207ENST00000614035 GOLGB1Q14789 3259 aaKnown RBP23.97■■□□□ 1.43
TNFAIP3-207ENST00000614035 CABP4P57796 275 aa23.96■■□□□ 1.43
TNFAIP3-207ENST00000614035 GPR162Q16538 588 aa23.96■■□□□ 1.43
TNFAIP3-207ENST00000614035 CC2D1BQ5T0F9 858 aaKnown RBP23.96■■□□□ 1.43
TNFAIP3-207ENST00000614035 GNPATO15228 680 aa23.95■■□□□ 1.42
TNFAIP3-207ENST00000614035 SMIM5Q71RC9 77 aa23.95■■□□□ 1.42
TNFAIP3-207ENST00000614035 SLC4A9Q96Q91 983 aa23.95■■□□□ 1.42
TNFAIP3-207ENST00000614035 CD2APQ9Y5K6 639 aa23.94■■□□□ 1.42
TNFAIP3-207ENST00000614035 COL5A3P25940 1745 aaPredicted RBP23.94■■□□□ 1.42
TNFAIP3-207ENST00000614035 SCN11AQ9UI33 1791 aa23.93■■□□□ 1.42
TNFAIP3-207ENST00000614035 RBM42Q9BTD8 480 aaKnown RBP23.92■■□□□ 1.42
TNFAIP3-207ENST00000614035 AKAP4Q5JQC9 854 aa23.91■■□□□ 1.42
TNFAIP3-207ENST00000614035 RC3H1Q5TC82 1133 aaKnown RBP23.91■■□□□ 1.42
TNFAIP3-207ENST00000614035 NFATC2IPQ8NCF5 419 aa23.91■■□□□ 1.42
TNFAIP3-207ENST00000614035 CNTNAP4Q9C0A0 1308 aa23.9■■□□□ 1.42
TNFAIP3-207ENST00000614035 DIAPH1O60610 1272 aaKnown RBP23.9■■□□□ 1.42
TNFAIP3-207ENST00000614035 COL3A1P02461 1466 aaPredicted RBP23.89■■□□□ 1.42
TNFAIP3-207ENST00000614035 HMOX1P09601 288 aa23.89■■□□□ 1.41
TNFAIP3-207ENST00000614035 PELP1Q8IZL8 1130 aaKnown RBP23.89■■□□□ 1.41
TNFAIP3-207ENST00000614035 ZNF784Q8NCA9 323 aaPredicted RBP23.89■■□□□ 1.41
TNFAIP3-207ENST00000614035 RTCBQ9Y3I0 505 aaKnown RBP23.89■■□□□ 1.41
TNFAIP3-207ENST00000614035 CICQ96RK0 1608 aaPredicted RBP23.88■■□□□ 1.41
TNFAIP3-207ENST00000614035 ADRA2BP18089 450 aa23.87■■□□□ 1.41
TNFAIP3-207ENST00000614035 MRC1P22897 1456 aa23.87■■□□□ 1.41
TNFAIP3-207ENST00000614035 YBX3P16989 372 aaKnown RBP eCLIP23.86■■□□□ 1.41
TNFAIP3-207ENST00000614035 GRIN3BO60391 1043 aa23.85■■□□□ 1.41
TNFAIP3-207ENST00000614035 PTCD1O75127 700 aaKnown RBP23.85■■□□□ 1.41
TNFAIP3-207ENST00000614035 TRAPPC3LQ5T215 181 aa23.85■■□□□ 1.41
TNFAIP3-207ENST00000614035 ADAMTS7Q9UKP4 1686 aa23.85■■□□□ 1.41
TNFAIP3-207ENST00000614035 MYH14Q7Z406 1995 aaKnown RBP23.85■■□□□ 1.41
TNFAIP3-207ENST00000614035 RPS6KA4O75676 772 aa23.84■■□□□ 1.41
TNFAIP3-207ENST00000614035 SLC52A2Q9HAB3 445 aa23.84■■□□□ 1.41
TNFAIP3-207ENST00000614035 TJP1Q07157 1748 aa23.83■■□□□ 1.41
TNFAIP3-207ENST00000614035 VIRMAQ69YN4 1812 aaKnown RBP23.83■■□□□ 1.41
TNFAIP3-207ENST00000614035 MTHFSDQ2M296 383 aaKnown RBP23.83■■□□□ 1.4
TNFAIP3-207ENST00000614035 ARHGEF1Q92888 912 aaKnown RBP23.83■■□□□ 1.4
TNFAIP3-207ENST00000614035 LGR6Q9HBX8 967 aa23.83■■□□□ 1.4
TNFAIP3-207ENST00000614035 RNMTO43148 476 aaKnown RBP23.82■■□□□ 1.4
TNFAIP3-207ENST00000614035 MMP10P09238 476 aa23.81■■□□□ 1.4
TNFAIP3-207ENST00000614035 NLGN1Q8N2Q7 840 aa23.81■■□□□ 1.4
TNFAIP3-207ENST00000614035 C4AP0C0L4 1744 aa23.81■■□□□ 1.4
TNFAIP3-207ENST00000614035 CRKLP46109 303 aaKnown RBP23.8■■□□□ 1.4
TNFAIP3-207ENST00000614035 CNGB1Q14028 1251 aaPredicted RBP23.8■■□□□ 1.4
TNFAIP3-207ENST00000614035 GYS1P13807 737 aa23.78■■□□□ 1.4
TNFAIP3-207ENST00000614035 RFC4P35249 363 aa23.78■■□□□ 1.4
TNFAIP3-207ENST00000614035 KIF13BQ9NQT8 1826 aa23.78■■□□□ 1.4
TNFAIP3-207ENST00000614035 U2SURPO15042 1029 aaKnown RBP23.77■■□□□ 1.4
TNFAIP3-207ENST00000614035 KCPQ6ZWJ8 1503 aa23.77■■□□□ 1.4
TNFAIP3-207ENST00000614035 INTS5Q6P9B9 1019 aaKnown RBP23.75■■□□□ 1.39
TNFAIP3-207ENST00000614035 SLC39A6Q13433 755 aa23.74■■□□□ 1.39
TNFAIP3-207ENST00000614035 DNAJC10Q8IXB1 793 aa23.74■■□□□ 1.39
TNFAIP3-207ENST00000614035 C10orf71Q711Q0 1435 aa23.74■■□□□ 1.39
TNFAIP3-207ENST00000614035 UBR2Q8IWV8 1755 aa23.73■■□□□ 1.39
TNFAIP3-207ENST00000614035 GAS2L2Q8NHY3 880 aa23.73■■□□□ 1.39
TNFAIP3-207ENST00000614035 CFAP53Q96M91 514 aa23.73■■□□□ 1.39
TNFAIP3-207ENST00000614035 USP42Q9H9J4 1324 aaKnown RBP23.73■■□□□ 1.39
TNFAIP3-207ENST00000614035 KIAA1551Q9HCM1 1747 aa23.73■■□□□ 1.39
TNFAIP3-207ENST00000614035 PXDNLA1KZ92 1463 aa23.72■■□□□ 1.39
TNFAIP3-207ENST00000614035 CYP19A1P11511 503 aaPredicted RBP23.71■■□□□ 1.39
TNFAIP3-207ENST00000614035 CCDC87Q9NVE4 849 aa23.71■■□□□ 1.39
TNFAIP3-207ENST00000614035 GNAT3A8MTJ3 354 aa23.7■■□□□ 1.38
TNFAIP3-207ENST00000614035 TGFB2P61812 414 aa23.7■■□□□ 1.38
TNFAIP3-207ENST00000614035 VSIG10Q8N0Z9 540 aa23.7■■□□□ 1.38
TNFAIP3-207ENST00000614035 PPP2R1AP30153 589 aa23.69■■□□□ 1.38
TNFAIP3-207ENST00000614035 IL17REQ8NFR9 667 aa23.69■■□□□ 1.38
TNFAIP3-207ENST00000614035 SRP68Q9UHB9 627 aaKnown RBP23.69■■□□□ 1.38
TNFAIP3-207ENST00000614035 PARP3Q9Y6F1 533 aa23.69■■□□□ 1.38
TNFAIP3-207ENST00000614035 SOS1Q07889 1333 aaPredicted RBP23.69■■□□□ 1.38
TNFAIP3-207ENST00000614035 RSPH6AQ9H0K4 717 aa23.68■■□□□ 1.38
TNFAIP3-207ENST00000614035 SIPA1L3O60292 1781 aaPredicted RBP23.68■■□□□ 1.38
TNFAIP3-207ENST00000614035 FKBP8Q14318 412 aa23.67■■□□□ 1.38
TNFAIP3-207ENST00000614035 WWC3Q9ULE0 1092 aa23.67■■□□□ 1.38
TNFAIP3-207ENST00000614035 NUDCQ9Y266 331 aa23.67■■□□□ 1.38
TNFAIP3-207ENST00000614035 N4BP2Q86UW6 1770 aaPredicted RBP23.67■■□□□ 1.38
TNFAIP3-207ENST00000614035 PRKAR2BP31323 418 aa23.67■■□□□ 1.38
TNFAIP3-207ENST00000614035 TEFQ10587 303 aa23.66■■□□□ 1.38
TNFAIP3-207ENST00000614035 PHACTR3Q96KR7 559 aa23.66■■□□□ 1.38
TNFAIP3-207ENST00000614035 ADCY9O60503 1353 aa23.65■■□□□ 1.38
TNFAIP3-207ENST00000614035 CEMIPQ8WUJ3 1361 aa23.65■■□□□ 1.38
TNFAIP3-207ENST00000614035 TTC5Q8N0Z6 440 aa23.65■■□□□ 1.38
TNFAIP3-207ENST00000614035 DDR1Q08345 913 aa23.64■■□□□ 1.37
TNFAIP3-207ENST00000614035 ZBTB1Q9Y2K1 713 aa23.64■■□□□ 1.37
TNFAIP3-207ENST00000614035 ATP10DQ9P241 1426 aa23.63■■□□□ 1.37
TNFAIP3-207ENST00000614035 BRCA1P38398 1863 aaKnown RBP23.63■■□□□ 1.37
TNFAIP3-207ENST00000614035 A0A0G2JLW4 131 aa23.63■■□□□ 1.37
TNFAIP3-207ENST00000614035 ZPR1O75312 459 aa23.63■■□□□ 1.37
TNFAIP3-207ENST00000614035 ZNF790Q6PG37 636 aa23.63■■□□□ 1.37
TNFAIP3-207ENST00000614035 COL15A1P39059 1388 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms