RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 SLC52A2Q9HAB3 445 aa26.14■■□□□ 1.78
CPNE9-205ENST00000613455 GLI3P10071 1580 aa26.14■■□□□ 1.77
CPNE9-205ENST00000613455 IRX6P78412 446 aaPredicted RBP26.13■■□□□ 1.77
CPNE9-205ENST00000613455 ATRNO75882 1429 aa26.12■■□□□ 1.77
CPNE9-205ENST00000613455 BTBD11A6QL63 1104 aa26.12■■□□□ 1.77
CPNE9-205ENST00000613455 EXOC5O00471 708 aa26.12■■□□□ 1.77
CPNE9-205ENST00000613455 ELL2O00472 640 aaPredicted RBP26.12■■□□□ 1.77
CPNE9-205ENST00000613455 FBXO41Q8TF61 875 aa26.12■■□□□ 1.77
CPNE9-205ENST00000613455 PLIN1O60240 522 aa26.11■■□□□ 1.77
CPNE9-205ENST00000613455 FKBP8Q14318 412 aa26.11■■□□□ 1.77
CPNE9-205ENST00000613455 BCL2L13Q9BXK5 485 aa26.11■■□□□ 1.77
CPNE9-205ENST00000613455 ZNF428Q96B54 188 aa26.11■■□□□ 1.77
CPNE9-205ENST00000613455 THSD7AQ9UPZ6 1657 aa26.11■■□□□ 1.77
CPNE9-205ENST00000613455 FAM98CQ17RN3 349 aaKnown RBP26.1■■□□□ 1.77
CPNE9-205ENST00000613455 NFATC2IPQ8NCF5 419 aa26.1■■□□□ 1.77
CPNE9-205ENST00000613455 SSH1Q8WYL5 1049 aa26.1■■□□□ 1.77
CPNE9-205ENST00000613455 KCNQ3O43525 872 aa26.09■■□□□ 1.77
CPNE9-205ENST00000613455 DDB1Q16531 1140 aa26.09■■□□□ 1.77
CPNE9-205ENST00000613455 ERVV-2B6SEH9 535 aa26.08■■□□□ 1.76
CPNE9-205ENST00000613455 ALDH1L2Q3SY69 923 aa26.08■■□□□ 1.76
CPNE9-205ENST00000613455 EIF4A1P60842 406 aaKnown RBP26.07■■□□□ 1.76
CPNE9-205ENST00000613455 PAPPAQ13219 1627 aa26.07■■□□□ 1.76
CPNE9-205ENST00000613455 CABP4P57796 275 aa26.06■■□□□ 1.76
CPNE9-205ENST00000613455 SMC4Q9NTJ3 1288 aa26.06■■□□□ 1.76
CPNE9-205ENST00000613455 ITGB4P16144 1822 aa26.06■■□□□ 1.76
CPNE9-205ENST00000613455 GJD4Q96KN9 370 aaPredicted RBP26.05■■□□□ 1.76
CPNE9-205ENST00000613455 TRPC5Q9UL62 973 aaPredicted RBP26.05■■□□□ 1.76
CPNE9-205ENST00000613455 DOT1LQ8TEK3 1739 aa26.04■■□□□ 1.76
CPNE9-205ENST00000613455 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.04■■□□□ 1.76
CPNE9-205ENST00000613455 HEG1Q9ULI3 1381 aa26.04■■□□□ 1.76
CPNE9-205ENST00000613455 BRPF1P55201 1214 aaPredicted RBP26.02■■□□□ 1.76
CPNE9-205ENST00000613455 SLC39A6Q13433 755 aa26.02■■□□□ 1.76
CPNE9-205ENST00000613455 ZNF790Q6PG37 636 aa26.02■■□□□ 1.76
CPNE9-205ENST00000613455 MARCH10Q8NA82 808 aaPredicted RBP26.02■■□□□ 1.76
CPNE9-205ENST00000613455 SOS1Q07889 1333 aaPredicted RBP26.02■■□□□ 1.76
CPNE9-205ENST00000613455 UBR2Q8IWV8 1755 aa26.02■■□□□ 1.76
CPNE9-205ENST00000613455 C20orf194Q5TEA3 1177 aa26.02■■□□□ 1.76
CPNE9-205ENST00000613455 MRPL50Q8N5N7 158 aaKnown RBP26■■□□□ 1.75
CPNE9-205ENST00000613455 FRAT1Q92837 279 aaPredicted RBP26■■□□□ 1.75
CPNE9-205ENST00000613455 TCERG1O14776 1098 aaKnown RBP26■■□□□ 1.75
CPNE9-205ENST00000613455 C5P01031 1676 aa25.99■■□□□ 1.75
CPNE9-205ENST00000613455 HOXB7P09629 217 aa25.99■■□□□ 1.75
CPNE9-205ENST00000613455 QTRT2Q9H974 415 aaKnown RBP25.99■■□□□ 1.75
CPNE9-205ENST00000613455 KIF16BQ96L93 1317 aa25.98■■□□□ 1.75
CPNE9-205ENST00000613455 CANXP27824 592 aaKnown RBP25.97■■□□□ 1.75
CPNE9-205ENST00000613455 KCPQ6ZWJ8 1503 aa25.97■■□□□ 1.75
CPNE9-205ENST00000613455 ONECUT3O60422 494 aaPredicted RBP25.97■■□□□ 1.75
CPNE9-205ENST00000613455 TMOD3Q9NYL9 352 aa25.97■■□□□ 1.75
CPNE9-205ENST00000613455 NOB1Q9ULX3 412 aaKnown RBP25.97■■□□□ 1.75
CPNE9-205ENST00000613455 GIGYF1O75420 1035 aaPredicted RBP25.96■■□□□ 1.75
CPNE9-205ENST00000613455 BCL9O00512 1426 aa25.96■■□□□ 1.75
CPNE9-205ENST00000613455 TTC5Q8N0Z6 440 aa25.95■■□□□ 1.74
CPNE9-205ENST00000613455 PIGBQ92521 554 aa25.95■■□□□ 1.74
CPNE9-205ENST00000613455 ZNF496Q96IT1 587 aaPredicted RBP25.95■■□□□ 1.74
CPNE9-205ENST00000613455 TNNQ9UQP3 1299 aa25.95■■□□□ 1.74
CPNE9-205ENST00000613455 CACNA1FO60840 1977 aa25.95■■□□□ 1.74
CPNE9-205ENST00000613455 KAT6BQ8WYB5 2073 aa25.95■■□□□ 1.74
CPNE9-205ENST00000613455 A0A0G2JS52 829 aa25.94■■□□□ 1.74
CPNE9-205ENST00000613455 MYT1Q01538 1121 aa25.94■■□□□ 1.74
CPNE9-205ENST00000613455 ERICH6BQ5W0A0 696 aa25.94■■□□□ 1.74
CPNE9-205ENST00000613455 ZKSCAN2Q63HK3 967 aa25.94■■□□□ 1.74
CPNE9-205ENST00000613455 PDE3AQ14432 1141 aa25.94■■□□□ 1.74
CPNE9-205ENST00000613455 PRAMEF22A3QJZ6 481 aa25.93■■□□□ 1.74
CPNE9-205ENST00000613455 TRIM27P14373 513 aa25.92■■□□□ 1.74
CPNE9-205ENST00000613455 HDGFL1Q5TGJ6 251 aa25.92■■□□□ 1.74
CPNE9-205ENST00000613455 CCDC30Q5VVM6 783 aa25.92■■□□□ 1.74
CPNE9-205ENST00000613455 CRBNQ96SW2 442 aa25.92■■□□□ 1.74
CPNE9-205ENST00000613455 LAMB4A4D0S4 1761 aa25.91■■□□□ 1.74
CPNE9-205ENST00000613455 ATF7IPQ6VMQ6 1270 aa25.91■■□□□ 1.74
CPNE9-205ENST00000613455 NECTIN2Q92692 538 aa25.91■■□□□ 1.74
CPNE9-205ENST00000613455 FMNL2Q96PY5 1086 aa25.91■■□□□ 1.74
CPNE9-205ENST00000613455 RLBP1P12271 317 aa25.91■■□□□ 1.74
CPNE9-205ENST00000613455 PRIM1P49642 420 aaKnown RBP25.91■■□□□ 1.74
CPNE9-205ENST00000613455 ZNF772Q68DY9 489 aaPredicted RBP25.91■■□□□ 1.74
CPNE9-205ENST00000613455 EXOC6Q8TAG9 804 aa25.91■■□□□ 1.74
CPNE9-205ENST00000613455 PANK1Q8TE04 598 aa25.91■■□□□ 1.74
CPNE9-205ENST00000613455 IPO8O15397 1037 aaKnown RBP25.89■■□□□ 1.74
CPNE9-205ENST00000613455 SLC4A2P04920 1241 aa25.89■■□□□ 1.74
CPNE9-205ENST00000613455 SEPT12Q8IYM1 358 aa25.89■■□□□ 1.74
CPNE9-205ENST00000613455 ARHGAP45Q92619 1136 aa25.89■■□□□ 1.74
CPNE9-205ENST00000613455 EIF2S2P20042 333 aaKnown RBP25.88■■□□□ 1.73
CPNE9-205ENST00000613455 STK31Q9BXU1 1019 aa25.88■■□□□ 1.73
CPNE9-205ENST00000613455 ASAP1Q9ULH1 1129 aa25.88■■□□□ 1.73
CPNE9-205ENST00000613455 CLUAP1Q96AJ1 413 aa25.88■■□□□ 1.73
CPNE9-205ENST00000613455 SYTL4Q96C24 671 aaPredicted RBP25.88■■□□□ 1.73
CPNE9-205ENST00000613455 ACSBG1Q96GR2 724 aa25.88■■□□□ 1.73
CPNE9-205ENST00000613455 RGS12O14924 1447 aa25.87■■□□□ 1.73
CPNE9-205ENST00000613455 SNRPA1P09661 255 aaKnown RBP25.87■■□□□ 1.73
CPNE9-205ENST00000613455 ATG3Q9NT62 314 aa25.87■■□□□ 1.73
CPNE9-205ENST00000613455 DZIP1LQ8IYY4 767 aaKnown RBP25.86■■□□□ 1.73
CPNE9-205ENST00000613455 BRWD3Q6RI45 1802 aa25.86■■□□□ 1.73
CPNE9-205ENST00000613455 G2E3Q7L622 706 aa25.85■■□□□ 1.73
CPNE9-205ENST00000613455 CHMP4AQ9BY43 222 aa25.85■■□□□ 1.73
CPNE9-205ENST00000613455 CHPF2Q9P2E5 772 aa25.85■■□□□ 1.73
CPNE9-205ENST00000613455 FTSJ3Q8IY81 847 aaKnown RBP25.84■■□□□ 1.73
CPNE9-205ENST00000613455 NHSQ6T4R5 1651 aa25.84■■□□□ 1.73
CPNE9-205ENST00000613455 PTCD1O75127 700 aaKnown RBP25.83■■□□□ 1.73
CPNE9-205ENST00000613455 MS4A1P11836 297 aa25.83■■□□□ 1.73
CPNE9-205ENST00000613455 COG6Q9Y2V7 657 aa25.83■■□□□ 1.73
CPNE9-205ENST00000613455 PTPRCP08575 1304 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms