RNA–Protein interactions for RNA: ENST00000613452.1

LINC01138-204, Transcript of long intergenic non-protein coding RNA 1138, humanhuman

TSL 1 (best)

Gene LINC01138, Length 1,050 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01138-204ENST00000613452 NLGN2Q8NFZ4 835 aa13.09□□□□□ -0.31
LINC01138-204ENST00000613452 ITPK1Q13572 414 aa13.08□□□□□ -0.32
LINC01138-204ENST00000613452 C1orf141Q5JVX7 400 aa13.08□□□□□ -0.32
LINC01138-204ENST00000613452 TRAPPC3LQ5T215 181 aa13.08□□□□□ -0.32
LINC01138-204ENST00000613452 SULT6B1Q6IMI4 303 aa13.08□□□□□ -0.32
LINC01138-204ENST00000613452 ZNF530Q6P9A1 599 aaPredicted RBP13.08□□□□□ -0.32
LINC01138-204ENST00000613452 MSL1Q68DK7 614 aa13.07□□□□□ -0.32
LINC01138-204ENST00000613452 NLGN1Q8N2Q7 840 aa13.07□□□□□ -0.32
LINC01138-204ENST00000613452 RTCBQ9Y3I0 505 aaKnown RBP13.07□□□□□ -0.32
LINC01138-204ENST00000613452 KIF7Q2M1P5 1343 aa13.07□□□□□ -0.32
LINC01138-204ENST00000613452 KDRP35968 1356 aa13.07□□□□□ -0.32
LINC01138-204ENST00000613452 GNPATO15228 680 aa13.06□□□□□ -0.32
LINC01138-204ENST00000613452 RPS6KA4O75676 772 aa13.06□□□□□ -0.32
LINC01138-204ENST00000613452 AMIGO3Q86WK7 504 aa13.06□□□□□ -0.32
LINC01138-204ENST00000613452 AKAP4Q5JQC9 854 aa13.05□□□□□ -0.32
LINC01138-204ENST00000613452 PELP1Q8IZL8 1130 aaKnown RBP13.05□□□□□ -0.32
LINC01138-204ENST00000613452 NFATC2IPQ8NCF5 419 aa13.05□□□□□ -0.32
LINC01138-204ENST00000613452 SLC4A9Q96Q91 983 aa13.05□□□□□ -0.32
LINC01138-204ENST00000613452 RBM42Q9BTD8 480 aaKnown RBP13.05□□□□□ -0.32
LINC01138-204ENST00000613452 ITGB4P16144 1822 aa13.04□□□□□ -0.32
LINC01138-204ENST00000613452 PHF14O94880 888 aa13.04□□□□□ -0.32
LINC01138-204ENST00000613452 YBX3P16989 372 aaKnown RBP eCLIP13.04□□□□□ -0.32
LINC01138-204ENST00000613452 AEBP1Q8IUX7 1158 aa13.04□□□□□ -0.32
LINC01138-204ENST00000613452 CNTNAP4Q9C0A0 1308 aa13.04□□□□□ -0.32
LINC01138-204ENST00000613452 NPC1L1Q9UHC9 1359 aa13.04□□□□□ -0.32
LINC01138-204ENST00000613452 C5P01031 1676 aa13.03□□□□□ -0.32
LINC01138-204ENST00000613452 C4BP0C0L5 1744 aa13.03□□□□□ -0.32
LINC01138-204ENST00000613452 TGFB2P61812 414 aa13.03□□□□□ -0.32
LINC01138-204ENST00000613452 ARHGEF1Q92888 912 aaKnown RBP13.03□□□□□ -0.32
LINC01138-204ENST00000613452 TOGARAM1Q9Y4F4 1720 aa13.02□□□□□ -0.32
LINC01138-204ENST00000613452 DIAPH1O60610 1272 aaKnown RBP13.02□□□□□ -0.33
LINC01138-204ENST00000613452 RFC4P35249 363 aa13.02□□□□□ -0.33
LINC01138-204ENST00000613452 TAF1LQ8IZX4 1826 aa13.02□□□□□ -0.33
LINC01138-204ENST00000613452 TUBGCP6Q96RT7 1819 aa13.02□□□□□ -0.33
LINC01138-204ENST00000613452 C1QTNF8P60827 252 aa13.01□□□□□ -0.33
LINC01138-204ENST00000613452 SMIM5Q71RC9 77 aa13.01□□□□□ -0.33
LINC01138-204ENST00000613452 CHD4Q14839 1912 aa13.01□□□□□ -0.33
LINC01138-204ENST00000613452 KDM6AO15550 1401 aaPredicted RBP13□□□□□ -0.33
LINC01138-204ENST00000613452 MMP10P09238 476 aa13□□□□□ -0.33
LINC01138-204ENST00000613452 SLC52A2Q9HAB3 445 aa13□□□□□ -0.33
LINC01138-204ENST00000613452 GOLGB1Q14789 3259 aaKnown RBP13□□□□□ -0.33
LINC01138-204ENST00000613452 RNMTO43148 476 aaKnown RBP12.99□□□□□ -0.33
LINC01138-204ENST00000613452 PTCD1O75127 700 aaKnown RBP12.99□□□□□ -0.33
LINC01138-204ENST00000613452 GYS1P13807 737 aa12.99□□□□□ -0.33
LINC01138-204ENST00000613452 CC2D1BQ5T0F9 858 aaKnown RBP12.99□□□□□ -0.33
LINC01138-204ENST00000613452 VSIG10Q8N0Z9 540 aa12.99□□□□□ -0.33
LINC01138-204ENST00000613452 LGR6Q9HBX8 967 aa12.99□□□□□ -0.33
LINC01138-204ENST00000613452 ZNF831Q5JPB2 1677 aa12.99□□□□□ -0.33
LINC01138-204ENST00000613452 CRKLP46109 303 aaKnown RBP12.98□□□□□ -0.33
LINC01138-204ENST00000613452 MTHFSDQ2M296 383 aaKnown RBP12.98□□□□□ -0.33
LINC01138-204ENST00000613452 CCDC87Q9NVE4 849 aa12.98□□□□□ -0.33
LINC01138-204ENST00000613452 PARP3Q9Y6F1 533 aa12.98□□□□□ -0.33
LINC01138-204ENST00000613452 UBR3Q6ZT12 1888 aa12.97□□□□□ -0.33
LINC01138-204ENST00000613452 INTS5Q6P9B9 1019 aaKnown RBP12.97□□□□□ -0.33
LINC01138-204ENST00000613452 GIGYF1O75420 1035 aaPredicted RBP12.96□□□□□ -0.33
LINC01138-204ENST00000613452 HMOX1P09601 288 aa12.96□□□□□ -0.33
LINC01138-204ENST00000613452 TM4SF1P30408 202 aa12.95□□□□□ -0.34
LINC01138-204ENST00000613452 GAS2L2Q8NHY3 880 aa12.95□□□□□ -0.34
LINC01138-204ENST00000613452 CYP19A1P11511 503 aaPredicted RBP12.94□□□□□ -0.34
LINC01138-204ENST00000613452 TEX13AQ9BXU3 409 aaPredicted RBP12.94□□□□□ -0.34
LINC01138-204ENST00000613452 USP42Q9H9J4 1324 aaKnown RBP12.93□□□□□ -0.34
LINC01138-204ENST00000613452 GNAT3A8MTJ3 354 aa12.93□□□□□ -0.34
LINC01138-204ENST00000613452 ZPR1O75312 459 aa12.93□□□□□ -0.34
LINC01138-204ENST00000613452 DNAJC10Q8IXB1 793 aa12.93□□□□□ -0.34
LINC01138-204ENST00000613452 CFAP53Q96M91 514 aa12.93□□□□□ -0.34
LINC01138-204ENST00000613452 A0A0G2JLW4 131 aa12.92□□□□□ -0.34
LINC01138-204ENST00000613452 STARD3NLO95772 234 aa12.92□□□□□ -0.34
LINC01138-204ENST00000613452 FKBP8Q14318 412 aa12.92□□□□□ -0.34
LINC01138-204ENST00000613452 GPBP1L1Q9HC44 474 aaPredicted RBP12.92□□□□□ -0.34
LINC01138-204ENST00000613452 NARFQ9UHQ1 456 aa12.92□□□□□ -0.34
LINC01138-204ENST00000613452 NUDCQ9Y266 331 aa12.92□□□□□ -0.34
LINC01138-204ENST00000613452 U2SURPO15042 1029 aaKnown RBP12.91□□□□□ -0.34
LINC01138-204ENST00000613452 DPEP1P16444 411 aa12.91□□□□□ -0.34
LINC01138-204ENST00000613452 KCNA3P22001 575 aa12.91□□□□□ -0.34
LINC01138-204ENST00000613452 SLC39A6Q13433 755 aa12.91□□□□□ -0.34
LINC01138-204ENST00000613452 IL17REQ8NFR9 667 aa12.91□□□□□ -0.34
LINC01138-204ENST00000613452 PIM2Q9P1W9 311 aa12.91□□□□□ -0.34
LINC01138-204ENST00000613452 SOS1Q07889 1333 aaPredicted RBP12.9□□□□□ -0.34
LINC01138-204ENST00000613452 A0A087WZG4 1122 aa12.9□□□□□ -0.34
LINC01138-204ENST00000613452 FCHSD2O94868 740 aa12.9□□□□□ -0.34
LINC01138-204ENST00000613452 TEFQ10587 303 aa12.9□□□□□ -0.34
LINC01138-204ENST00000613452 TTC5Q8N0Z6 440 aa12.9□□□□□ -0.34
LINC01138-204ENST00000613452 SRP68Q9UHB9 627 aaKnown RBP12.9□□□□□ -0.34
LINC01138-204ENST00000613452 BCS1LQ9Y276 419 aa12.9□□□□□ -0.34
LINC01138-204ENST00000613452 C10orf71Q711Q0 1435 aa12.89□□□□□ -0.35
LINC01138-204ENST00000613452 ATP10DQ9P241 1426 aa12.89□□□□□ -0.35
LINC01138-204ENST00000613452 SENP3-EIF4A1A0A087X0R7 540 aa12.89□□□□□ -0.35
LINC01138-204ENST00000613452 POLRMTO00411 1230 aaKnown RBP12.89□□□□□ -0.35
LINC01138-204ENST00000613452 EIF5P55010 431 aaKnown RBP12.89□□□□□ -0.35
LINC01138-204ENST00000613452 USPL1Q5W0Q7 1092 aa12.89□□□□□ -0.35
LINC01138-204ENST00000613452 ZNF790Q6PG37 636 aa12.89□□□□□ -0.35
LINC01138-204ENST00000613452 PPP4R3CPQ6ZMV5 832 aa12.89□□□□□ -0.35
LINC01138-204ENST00000613452 ARHGAP27Q6ZUM4 889 aa12.89□□□□□ -0.35
LINC01138-204ENST00000613452 ADCY9O60503 1353 aa12.89□□□□□ -0.35
LINC01138-204ENST00000613452 HTATSF1O43719 755 aaKnown RBP12.88□□□□□ -0.35
LINC01138-204ENST00000613452 DDR1Q08345 913 aa12.88□□□□□ -0.35
LINC01138-204ENST00000613452 DALRD3Q5D0E6 543 aaKnown RBP12.88□□□□□ -0.35
LINC01138-204ENST00000613452 PXDNLA1KZ92 1463 aa12.88□□□□□ -0.35
LINC01138-204ENST00000613452 COL5A3P25940 1745 aaPredicted RBP12.88□□□□□ -0.35
LINC01138-204ENST00000613452 MYH14Q7Z406 1995 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms