RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 NFATC2IPQ8NCF5 419 aa17■□□□□ 0.31
CSTF1-208ENST00000613138 LINC00116Q8NCU8 138 aa17■□□□□ 0.31
CSTF1-208ENST00000613138 DLG5Q8TDM6 1919 aa17■□□□□ 0.31
CSTF1-208ENST00000613138 MYH14Q7Z406 1995 aaKnown RBP16.99■□□□□ 0.31
CSTF1-208ENST00000613138 LOC102724428A0A0B4J2F2 783 aa16.99■□□□□ 0.31
CSTF1-208ENST00000613138 ERVV-2B6SEH9 535 aa16.99■□□□□ 0.31
CSTF1-208ENST00000613138 RNMTO43148 476 aaKnown RBP16.99■□□□□ 0.31
CSTF1-208ENST00000613138 HSP90AB1P08238 724 aaKnown RBP16.99■□□□□ 0.31
CSTF1-208ENST00000613138 SIK1P57059 783 aa16.99■□□□□ 0.31
CSTF1-208ENST00000613138 SMARCC1Q92922 1105 aaPredicted RBP16.98■□□□□ 0.31
CSTF1-208ENST00000613138 TFCP2L1Q9NZI6 479 aa16.98■□□□□ 0.31
CSTF1-208ENST00000613138 SIPA1L3O60292 1781 aaPredicted RBP16.97■□□□□ 0.31
CSTF1-208ENST00000613138 COL5A3P25940 1745 aaPredicted RBP16.97■□□□□ 0.31
CSTF1-208ENST00000613138 SLC39A6Q13433 755 aa16.97■□□□□ 0.31
CSTF1-208ENST00000613138 RBM42Q9BTD8 480 aaKnown RBP16.97■□□□□ 0.31
CSTF1-208ENST00000613138 MRC1P22897 1456 aa16.97■□□□□ 0.31
CSTF1-208ENST00000613138 TJP1Q07157 1748 aa16.96■□□□□ 0.31
CSTF1-208ENST00000613138 PTCD1O75127 700 aaKnown RBP16.96■□□□□ 0.31
CSTF1-208ENST00000613138 HMGB2P26583 209 aaKnown RBP16.96■□□□□ 0.31
CSTF1-208ENST00000613138 ATP6V1AP38606 617 aa16.96■□□□□ 0.31
CSTF1-208ENST00000613138 PTGER2P43116 358 aa16.96■□□□□ 0.31
CSTF1-208ENST00000613138 SPON1Q9HCB6 807 aa16.96■□□□□ 0.31
CSTF1-208ENST00000613138 NUDCQ9Y266 331 aa16.96■□□□□ 0.31
CSTF1-208ENST00000613138 RALBP1Q15311 655 aa16.95■□□□□ 0.3
CSTF1-208ENST00000613138 COL23A1Q86Y22 540 aaPredicted RBP16.95■□□□□ 0.3
CSTF1-208ENST00000613138 IL17REQ8NFR9 667 aa16.95■□□□□ 0.3
CSTF1-208ENST00000613138 SLC52A2Q9HAB3 445 aa16.95■□□□□ 0.3
CSTF1-208ENST00000613138 MAP3K5Q99683 1374 aa16.94■□□□□ 0.3
CSTF1-208ENST00000613138 ZNF316A6NFI3 1004 aaPredicted RBP16.93■□□□□ 0.3
CSTF1-208ENST00000613138 PHF14O94880 888 aa16.93■□□□□ 0.3
CSTF1-208ENST00000613138 DCTN1Q14203 1278 aa16.93■□□□□ 0.3
CSTF1-208ENST00000613138 MSL1Q68DK7 614 aa16.93■□□□□ 0.3
CSTF1-208ENST00000613138 MYBBP1AQ9BQG0 1328 aaKnown RBP16.93■□□□□ 0.3
CSTF1-208ENST00000613138 COL24A1Q17RW2 1714 aa16.93■□□□□ 0.3
CSTF1-208ENST00000613138 KCPQ6ZWJ8 1503 aa16.92■□□□□ 0.3
CSTF1-208ENST00000613138 MSH5O43196 834 aa16.92■□□□□ 0.3
CSTF1-208ENST00000613138 GAS2L2Q8NHY3 880 aa16.92■□□□□ 0.3
CSTF1-208ENST00000613138 SGIP1Q9BQI5 828 aa16.92■□□□□ 0.3
CSTF1-208ENST00000613138 UBR2Q8IWV8 1755 aa16.92■□□□□ 0.3
CSTF1-208ENST00000613138 ZNF831Q5JPB2 1677 aa16.91■□□□□ 0.3
CSTF1-208ENST00000613138 GNAT3A8MTJ3 354 aa16.91■□□□□ 0.3
CSTF1-208ENST00000613138 FCHSD2O94868 740 aa16.91■□□□□ 0.3
CSTF1-208ENST00000613138 MCM10Q7L590 875 aa16.91■□□□□ 0.3
CSTF1-208ENST00000613138 AK7Q96M32 723 aa16.91■□□□□ 0.3
CSTF1-208ENST00000613138 MTFR1LQ9H019 292 aa16.91■□□□□ 0.3
CSTF1-208ENST00000613138 PRKRIP1Q9H875 184 aaPredicted RBP16.91■□□□□ 0.3
CSTF1-208ENST00000613138 KCNQ3O43525 872 aa16.9■□□□□ 0.3
CSTF1-208ENST00000613138 PLEKHF1Q96S99 279 aa16.9■□□□□ 0.3
CSTF1-208ENST00000613138 PPP1R1BQ9UD71 204 aaPredicted RBP16.9■□□□□ 0.3
CSTF1-208ENST00000613138 GNPATO15228 680 aa16.89■□□□□ 0.29
CSTF1-208ENST00000613138 C4AP0C0L4 1744 aa16.88■□□□□ 0.29
CSTF1-208ENST00000613138 CCDC184Q52MB2 194 aa16.88■□□□□ 0.29
CSTF1-208ENST00000613138 DNAJC10Q8IXB1 793 aa16.88■□□□□ 0.29
CSTF1-208ENST00000613138 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.87■□□□□ 0.29
CSTF1-208ENST00000613138 CCDC146Q8IYE0 955 aa16.87■□□□□ 0.29
CSTF1-208ENST00000613138 THUMPD2Q9BTF0 503 aaKnown RBP16.87■□□□□ 0.29
CSTF1-208ENST00000613138 CEMIPQ8WUJ3 1361 aa16.87■□□□□ 0.29
CSTF1-208ENST00000613138 CICQ96RK0 1608 aaPredicted RBP16.86■□□□□ 0.29
CSTF1-208ENST00000613138 CRKLP46109 303 aaKnown RBP16.85■□□□□ 0.29
CSTF1-208ENST00000613138 TEFQ10587 303 aa16.85■□□□□ 0.29
CSTF1-208ENST00000613138 ZNF496Q96IT1 587 aaPredicted RBP16.84■□□□□ 0.29
CSTF1-208ENST00000613138 FHDC1Q9C0D6 1143 aaPredicted RBP16.84■□□□□ 0.29
CSTF1-208ENST00000613138 MIS18AQ9NYP9 233 aa16.84■□□□□ 0.29
CSTF1-208ENST00000613138 INTS5Q6P9B9 1019 aaKnown RBP16.83■□□□□ 0.28
CSTF1-208ENST00000613138 KLHL34Q8N239 644 aa16.83■□□□□ 0.28
CSTF1-208ENST00000613138 ARXQ96QS3 562 aa16.83■□□□□ 0.28
CSTF1-208ENST00000613138 RRP7AQ9Y3A4 280 aaKnown RBP16.83■□□□□ 0.28
CSTF1-208ENST00000613138 CNTNAP4Q9C0A0 1308 aa16.82■□□□□ 0.28
CSTF1-208ENST00000613138 PRAMEF22A3QJZ6 481 aa16.82■□□□□ 0.28
CSTF1-208ENST00000613138 NFE2L2Q16236 605 aa16.82■□□□□ 0.28
CSTF1-208ENST00000613138 SLC16A10Q8TF71 515 aa16.82■□□□□ 0.28
CSTF1-208ENST00000613138 SENP3-EIF4A1A0A087X0R7 540 aa16.81■□□□□ 0.28
CSTF1-208ENST00000613138 SSFA2P28290 1259 aa16.81■□□□□ 0.28
CSTF1-208ENST00000613138 ZNF790Q6PG37 636 aa16.81■□□□□ 0.28
CSTF1-208ENST00000613138 RTF1Q92541 710 aaKnown RBP16.81■□□□□ 0.28
CSTF1-208ENST00000613138 ARHGEF1Q92888 912 aaKnown RBP16.81■□□□□ 0.28
CSTF1-208ENST00000613138 SRP68Q9UHB9 627 aaKnown RBP16.81■□□□□ 0.28
CSTF1-208ENST00000613138 ADAMTS8Q9UP79 889 aa16.81■□□□□ 0.28
CSTF1-208ENST00000613138 BTBD11A6QL63 1104 aa16.8■□□□□ 0.28
CSTF1-208ENST00000613138 CYP19A1P11511 503 aaPredicted RBP16.8■□□□□ 0.28
CSTF1-208ENST00000613138 RC3H1Q5TC82 1133 aaKnown RBP16.8■□□□□ 0.28
CSTF1-208ENST00000613138 ZBTB1Q9Y2K1 713 aa16.8■□□□□ 0.28
CSTF1-208ENST00000613138 RTCBQ9Y3I0 505 aaKnown RBP16.8■□□□□ 0.28
CSTF1-208ENST00000613138 KDM3BQ7LBC6 1761 aa16.79■□□□□ 0.28
CSTF1-208ENST00000613138 MAPK8IP3Q9UPT6 1336 aa16.79■□□□□ 0.28
CSTF1-208ENST00000613138 RPS6KA4O75676 772 aa16.79■□□□□ 0.28
CSTF1-208ENST00000613138 TTC5Q8N0Z6 440 aa16.79■□□□□ 0.28
CSTF1-208ENST00000613138 FLAD1Q8NFF5 587 aa16.79■□□□□ 0.28
CSTF1-208ENST00000613138 SYT17Q9BSW7 474 aa16.79■□□□□ 0.28
CSTF1-208ENST00000613138 HEG1Q9ULI3 1381 aa16.78■□□□□ 0.28
CSTF1-208ENST00000613138 POLD1P28340 1107 aa16.78■□□□□ 0.28
CSTF1-208ENST00000613138 PIP4K2AP48426 406 aaPredicted RBP16.78■□□□□ 0.28
CSTF1-208ENST00000613138 NEUROD2Q15784 382 aa16.78■□□□□ 0.28
CSTF1-208ENST00000613138 TRAPPC3LQ5T215 181 aa16.78■□□□□ 0.28
CSTF1-208ENST00000613138 NLGN2Q8NFZ4 835 aa16.78■□□□□ 0.28
CSTF1-208ENST00000613138 WDR43Q15061 677 aaKnown RBP eCLIP16.77■□□□□ 0.28
CSTF1-208ENST00000613138 CCDC87Q9NVE4 849 aa16.77■□□□□ 0.28
CSTF1-208ENST00000613138 NEFMP07197 916 aa16.76■□□□□ 0.27
CSTF1-208ENST00000613138 CANXP27824 592 aaKnown RBP16.76■□□□□ 0.27
CSTF1-208ENST00000613138 TMPOP42166 694 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms