RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 C4AP0C0L4 1744 aa23.97■■□□□ 1.43
CSNK1E-215ENST00000612795 ITPK1Q13572 414 aa23.97■■□□□ 1.43
CSNK1E-215ENST00000612795 ASAP1Q9ULH1 1129 aa23.97■■□□□ 1.43
CSNK1E-215ENST00000612795 ARFGEF1Q9Y6D6 1849 aa23.96■■□□□ 1.43
CSNK1E-215ENST00000612795 BCS1LQ9Y276 419 aa23.96■■□□□ 1.43
CSNK1E-215ENST00000612795 ZNF831Q5JPB2 1677 aa23.95■■□□□ 1.43
CSNK1E-215ENST00000612795 TOMM70O94826 608 aa23.95■■□□□ 1.42
CSNK1E-215ENST00000612795 CDCA8Q53HL2 280 aa23.95■■□□□ 1.42
CSNK1E-215ENST00000612795 C10orf71Q711Q0 1435 aa23.94■■□□□ 1.42
CSNK1E-215ENST00000612795 TGFB2P61812 414 aa23.94■■□□□ 1.42
CSNK1E-215ENST00000612795 IFNL2Q8IZJ0 200 aa23.93■■□□□ 1.42
CSNK1E-215ENST00000612795 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.93■■□□□ 1.42
CSNK1E-215ENST00000612795 RTCBQ9Y3I0 505 aaKnown RBP23.92■■□□□ 1.42
CSNK1E-215ENST00000612795 A0A0G2JLW4 131 aa23.91■■□□□ 1.42
CSNK1E-215ENST00000612795 PHKG2P15735 406 aa23.91■■□□□ 1.42
CSNK1E-215ENST00000612795 TRAPPC3LQ5T215 181 aa23.91■■□□□ 1.42
CSNK1E-215ENST00000612795 ARHGAP27Q6ZUM4 889 aa23.91■■□□□ 1.42
CSNK1E-215ENST00000612795 ATG3Q9NT62 314 aa23.91■■□□□ 1.42
CSNK1E-215ENST00000612795 KDRP35968 1356 aa23.91■■□□□ 1.42
CSNK1E-215ENST00000612795 WASHC2AQ641Q2 1341 aa23.9■■□□□ 1.42
CSNK1E-215ENST00000612795 NLGN1Q8N2Q7 840 aa23.9■■□□□ 1.42
CSNK1E-215ENST00000612795 EYA1Q99502 592 aa23.9■■□□□ 1.42
CSNK1E-215ENST00000612795 CCDC87Q9NVE4 849 aa23.9■■□□□ 1.42
CSNK1E-215ENST00000612795 NMRK2Q9NPI5 230 aa23.89■■□□□ 1.41
CSNK1E-215ENST00000612795 FCHSD2O94868 740 aa23.88■■□□□ 1.41
CSNK1E-215ENST00000612795 CARD14Q9BXL6 1004 aa23.88■■□□□ 1.41
CSNK1E-215ENST00000612795 MYH14Q7Z406 1995 aaKnown RBP23.87■■□□□ 1.41
CSNK1E-215ENST00000612795 RBM42Q9BTD8 480 aaKnown RBP23.87■■□□□ 1.41
CSNK1E-215ENST00000612795 PLEKHG2Q9H7P9 1386 aa23.87■■□□□ 1.41
CSNK1E-215ENST00000612795 DPEP1P16444 411 aa23.86■■□□□ 1.41
CSNK1E-215ENST00000612795 ADRA2BP18089 450 aa23.86■■□□□ 1.41
CSNK1E-215ENST00000612795 C16orf71Q8IYS4 520 aaPredicted RBP23.86■■□□□ 1.41
CSNK1E-215ENST00000612795 PARP3Q9Y6F1 533 aa23.86■■□□□ 1.41
CSNK1E-215ENST00000612795 RFC4P35249 363 aa23.85■■□□□ 1.41
CSNK1E-215ENST00000612795 DNAJC5GQ8N7S2 189 aa23.85■■□□□ 1.41
CSNK1E-215ENST00000612795 TNRC6CQ9HCJ0 1690 aaKnown RBP23.85■■□□□ 1.41
CSNK1E-215ENST00000612795 CNTNAP4Q9C0A0 1308 aa23.84■■□□□ 1.41
CSNK1E-215ENST00000612795 RBM46Q8TBY0 533 aaKnown RBP23.83■■□□□ 1.41
CSNK1E-215ENST00000612795 ARHGEF1Q92888 912 aaKnown RBP23.83■■□□□ 1.41
CSNK1E-215ENST00000612795 SBF1O95248 1867 aa23.82■■□□□ 1.4
CSNK1E-215ENST00000612795 GYS1P13807 737 aa23.82■■□□□ 1.4
CSNK1E-215ENST00000612795 RC3H1Q5TC82 1133 aaKnown RBP23.81■■□□□ 1.4
CSNK1E-215ENST00000612795 C9orf131Q5VYM1 1079 aa23.81■■□□□ 1.4
CSNK1E-215ENST00000612795 SLC4A9Q96Q91 983 aa23.81■■□□□ 1.4
CSNK1E-215ENST00000612795 KCPQ6ZWJ8 1503 aa23.8■■□□□ 1.4
CSNK1E-215ENST00000612795 ERVV-2B6SEH9 535 aa23.8■■□□□ 1.4
CSNK1E-215ENST00000612795 RPS6KA4O75676 772 aa23.8■■□□□ 1.4
CSNK1E-215ENST00000612795 HSP90AB1P08238 724 aaKnown RBP23.8■■□□□ 1.4
CSNK1E-215ENST00000612795 EIF4A2Q14240 407 aaKnown RBP23.8■■□□□ 1.4
CSNK1E-215ENST00000612795 POLKQ9UBT6 870 aa23.8■■□□□ 1.4
CSNK1E-215ENST00000612795 KDM2BQ8NHM5 1336 aa23.79■■□□□ 1.4
CSNK1E-215ENST00000612795 TJP1Q07157 1748 aa23.79■■□□□ 1.4
CSNK1E-215ENST00000612795 DCAF5Q96JK2 942 aa23.78■■□□□ 1.4
CSNK1E-215ENST00000612795 PIM2Q9P1W9 311 aa23.78■■□□□ 1.4
CSNK1E-215ENST00000612795 KLRG1Q96E93 195 aa23.77■■□□□ 1.4
CSNK1E-215ENST00000612795 KDM6AO15550 1401 aaPredicted RBP23.76■■□□□ 1.39
CSNK1E-215ENST00000612795 TNNT2P45379 298 aaPredicted RBP23.76■■□□□ 1.39
CSNK1E-215ENST00000612795 CABP4P57796 275 aa23.76■■□□□ 1.39
CSNK1E-215ENST00000612795 HTRA3P83110 453 aa23.76■■□□□ 1.39
CSNK1E-215ENST00000612795 FSTL1Q12841 308 aa23.76■■□□□ 1.39
CSNK1E-215ENST00000612795 RNF181Q9P0P0 153 aa23.76■■□□□ 1.39
CSNK1E-215ENST00000612795 KCNA3P22001 575 aa23.75■■□□□ 1.39
CSNK1E-215ENST00000612795 DALRD3Q5D0E6 543 aaKnown RBP23.75■■□□□ 1.39
CSNK1E-215ENST00000612795 PLEKHO1Q53GL0 409 aaPredicted RBP23.74■■□□□ 1.39
CSNK1E-215ENST00000612795 ZNF530Q6P9A1 599 aaPredicted RBP23.74■■□□□ 1.39
CSNK1E-215ENST00000612795 SCN11AQ9UI33 1791 aa23.73■■□□□ 1.39
CSNK1E-215ENST00000612795 PTCD1O75127 700 aaKnown RBP23.72■■□□□ 1.39
CSNK1E-215ENST00000612795 SRP68Q9UHB9 627 aaKnown RBP23.72■■□□□ 1.39
CSNK1E-215ENST00000612795 USP42Q9H9J4 1324 aaKnown RBP23.72■■□□□ 1.39
CSNK1E-215ENST00000612795 CCDC88AQ3V6T2 1871 aa23.71■■□□□ 1.39
CSNK1E-215ENST00000612795 AFDNP55196 1824 aaKnown RBP23.71■■□□□ 1.39
CSNK1E-215ENST00000612795 VIRMAQ69YN4 1812 aaKnown RBP23.71■■□□□ 1.39
CSNK1E-215ENST00000612795 CRKLP46109 303 aaKnown RBP23.71■■□□□ 1.39
CSNK1E-215ENST00000612795 POLR3GLQ9BT43 218 aa23.71■■□□□ 1.39
CSNK1E-215ENST00000612795 TIAM2Q8IVF5 1701 aa23.7■■□□□ 1.39
CSNK1E-215ENST00000612795 ADAMTS7Q9UKP4 1686 aa23.7■■□□□ 1.39
CSNK1E-215ENST00000612795 FKBP8Q14318 412 aa23.7■■□□□ 1.38
CSNK1E-215ENST00000612795 JMYQ8N9B5 988 aa23.7■■□□□ 1.38
CSNK1E-215ENST00000612795 RRAGCQ9HB90 399 aa23.7■■□□□ 1.38
CSNK1E-215ENST00000612795 DLEC1Q9Y238 1755 aa23.7■■□□□ 1.38
CSNK1E-215ENST00000612795 CHRNA5P30532 468 aa23.69■■□□□ 1.38
CSNK1E-215ENST00000612795 DDR1Q08345 913 aa23.69■■□□□ 1.38
CSNK1E-215ENST00000612795 AMOTQ4VCS5 1084 aa23.69■■□□□ 1.38
CSNK1E-215ENST00000612795 C1orf141Q5JVX7 400 aa23.69■■□□□ 1.38
CSNK1E-215ENST00000612795 COL13A1Q5TAT6 717 aaPredicted RBP23.69■■□□□ 1.38
CSNK1E-215ENST00000612795 MTHFSP49914 203 aa23.68■■□□□ 1.38
CSNK1E-215ENST00000612795 CAPN15O75808 1086 aa23.67■■□□□ 1.38
CSNK1E-215ENST00000612795 SMC1BQ8NDV3 1235 aa23.67■■□□□ 1.38
CSNK1E-215ENST00000612795 NFATC2IPQ8NCF5 419 aa23.64■■□□□ 1.37
CSNK1E-215ENST00000612795 ZC3H4Q9UPT8 1303 aaKnown RBP23.63■■□□□ 1.37
CSNK1E-215ENST00000612795 POLRMTO00411 1230 aaKnown RBP23.63■■□□□ 1.37
CSNK1E-215ENST00000612795 ZPR1O75312 459 aa23.63■■□□□ 1.37
CSNK1E-215ENST00000612795 TNS4Q8IZW8 715 aa23.63■■□□□ 1.37
CSNK1E-215ENST00000612795 NRXN2Q9P2S2 1712 aa23.63■■□□□ 1.37
CSNK1E-215ENST00000612795 RASSF7Q02833 373 aa23.62■■□□□ 1.37
CSNK1E-215ENST00000612795 AEBP1Q8IUX7 1158 aa23.61■■□□□ 1.37
CSNK1E-215ENST00000612795 USPL1Q5W0Q7 1092 aa23.6■■□□□ 1.37
CSNK1E-215ENST00000612795 PCNTO95613 3336 aa23.59■■□□□ 1.37
CSNK1E-215ENST00000612795 TM4SF1P30408 202 aa23.59■■□□□ 1.37
CSNK1E-215ENST00000612795 INTS5Q6P9B9 1019 aaKnown RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms