RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 DCAF5Q96JK2 942 aa20.14■□□□□ 0.81
FDPS-221ENST00000612683 GRIN3BO60391 1043 aa20.13■□□□□ 0.81
FDPS-221ENST00000612683 RBM42Q9BTD8 480 aaKnown RBP20.13■□□□□ 0.81
FDPS-221ENST00000612683 CD2APQ9Y5K6 639 aa20.13■□□□□ 0.81
FDPS-221ENST00000612683 UTRNP46939 3433 aa20.12■□□□□ 0.81
FDPS-221ENST00000612683 GNPATO15228 680 aa20.12■□□□□ 0.81
FDPS-221ENST00000612683 YBX3P16989 372 aaKnown RBP eCLIP20.12■□□□□ 0.81
FDPS-221ENST00000612683 SULT6B1Q6IMI4 303 aa20.12■□□□□ 0.81
FDPS-221ENST00000612683 AEBP1Q8IUX7 1158 aa20.12■□□□□ 0.81
FDPS-221ENST00000612683 PLEKHG2Q9H7P9 1386 aa20.11■□□□□ 0.81
FDPS-221ENST00000612683 MTHFSP49914 203 aa20.11■□□□□ 0.81
FDPS-221ENST00000612683 CABP4P57796 275 aa20.11■□□□□ 0.81
FDPS-221ENST00000612683 C1orf141Q5JVX7 400 aa20.11■□□□□ 0.81
FDPS-221ENST00000612683 UBR3Q6ZT12 1888 aa20.09■□□□□ 0.81
FDPS-221ENST00000612683 KIF7Q2M1P5 1343 aa20.09■□□□□ 0.81
FDPS-221ENST00000612683 AMER1Q5JTC6 1135 aaPredicted RBP20.09■□□□□ 0.81
FDPS-221ENST00000612683 IL13P35225 146 aa20.08■□□□□ 0.81
FDPS-221ENST00000612683 RTCBQ9Y3I0 505 aaKnown RBP20.08■□□□□ 0.81
FDPS-221ENST00000612683 TRAPPC3LQ5T215 181 aa20.07■□□□□ 0.8
FDPS-221ENST00000612683 SLC4A9Q96Q91 983 aa20.07■□□□□ 0.8
FDPS-221ENST00000612683 NFATC2IPQ8NCF5 419 aa20.06■□□□□ 0.8
FDPS-221ENST00000612683 RC3H1Q5TC82 1133 aaKnown RBP20.05■□□□□ 0.8
FDPS-221ENST00000612683 KDM6AO15550 1401 aaPredicted RBP20.04■□□□□ 0.8
FDPS-221ENST00000612683 PTCD1O75127 700 aaKnown RBP20.04■□□□□ 0.8
FDPS-221ENST00000612683 WWC3Q9ULE0 1092 aa20.04■□□□□ 0.8
FDPS-221ENST00000612683 MMP10P09238 476 aa20.03■□□□□ 0.8
FDPS-221ENST00000612683 CC2D1BQ5T0F9 858 aaKnown RBP20.03■□□□□ 0.8
FDPS-221ENST00000612683 PER1O15534 1290 aaPredicted RBP20.02■□□□□ 0.8
FDPS-221ENST00000612683 RPS6KA4O75676 772 aa20.02■□□□□ 0.8
FDPS-221ENST00000612683 NLGN1Q8N2Q7 840 aa20.02■□□□□ 0.8
FDPS-221ENST00000612683 ARHGEF1Q92888 912 aaKnown RBP20.02■□□□□ 0.8
FDPS-221ENST00000612683 KDRP35968 1356 aa20.02■□□□□ 0.8
FDPS-221ENST00000612683 HMOX1P09601 288 aa20.01■□□□□ 0.79
FDPS-221ENST00000612683 RFC4P35249 363 aa20.01■□□□□ 0.79
FDPS-221ENST00000612683 C1QTNF8P60827 252 aa20.01■□□□□ 0.79
FDPS-221ENST00000612683 CNGB1Q14028 1251 aaPredicted RBP20.01■□□□□ 0.79
FDPS-221ENST00000612683 ADRA2BP18089 450 aa20■□□□□ 0.79
FDPS-221ENST00000612683 AKAP4Q5JQC9 854 aa20■□□□□ 0.79
FDPS-221ENST00000612683 CNTNAP4Q9C0A0 1308 aa20■□□□□ 0.79
FDPS-221ENST00000612683 LGR6Q9HBX8 967 aa19.99■□□□□ 0.79
FDPS-221ENST00000612683 DIAPH1O60610 1272 aaKnown RBP19.98■□□□□ 0.79
FDPS-221ENST00000612683 GIGYF1O75420 1035 aaPredicted RBP19.98■□□□□ 0.79
FDPS-221ENST00000612683 GOLGB1Q14789 3259 aaKnown RBP19.98■□□□□ 0.79
FDPS-221ENST00000612683 CRKLP46109 303 aaKnown RBP19.97■□□□□ 0.79
FDPS-221ENST00000612683 GYS1P13807 737 aa19.96■□□□□ 0.79
FDPS-221ENST00000612683 SLC52A2Q9HAB3 445 aa19.96■□□□□ 0.79
FDPS-221ENST00000612683 ZNF831Q5JPB2 1677 aa19.96■□□□□ 0.79
FDPS-221ENST00000612683 SENP3-EIF4A1A0A087X0R7 540 aa19.95■□□□□ 0.78
FDPS-221ENST00000612683 RNMTO43148 476 aaKnown RBP19.95■□□□□ 0.78
FDPS-221ENST00000612683 PARP3Q9Y6F1 533 aa19.95■□□□□ 0.78
FDPS-221ENST00000612683 MYH14Q7Z406 1995 aaKnown RBP19.94■□□□□ 0.78
FDPS-221ENST00000612683 TGFB2P61812 414 aa19.94■□□□□ 0.78
FDPS-221ENST00000612683 MTHFSDQ2M296 383 aaKnown RBP19.94■□□□□ 0.78
FDPS-221ENST00000612683 A0A0G2JLW4 131 aa19.93■□□□□ 0.78
FDPS-221ENST00000612683 SLC39A6Q13433 755 aa19.93■□□□□ 0.78
FDPS-221ENST00000612683 CCDC87Q9NVE4 849 aa19.93■□□□□ 0.78
FDPS-221ENST00000612683 DNAJC10Q8IXB1 793 aa19.92■□□□□ 0.78
FDPS-221ENST00000612683 SRP68Q9UHB9 627 aaKnown RBP19.92■□□□□ 0.78
FDPS-221ENST00000612683 COL5A3P25940 1745 aaPredicted RBP19.92■□□□□ 0.78
FDPS-221ENST00000612683 SCN11AQ9UI33 1791 aa19.92■□□□□ 0.78
FDPS-221ENST00000612683 U2SURPO15042 1029 aaKnown RBP19.91■□□□□ 0.78
FDPS-221ENST00000612683 INTS5Q6P9B9 1019 aaKnown RBP19.91■□□□□ 0.78
FDPS-221ENST00000612683 ZNF526Q8TF50 670 aaPredicted RBP19.9■□□□□ 0.78
FDPS-221ENST00000612683 GPBP1L1Q9HC44 474 aaPredicted RBP19.9■□□□□ 0.78
FDPS-221ENST00000612683 BCS1LQ9Y276 419 aa19.9■□□□□ 0.78
FDPS-221ENST00000612683 ATP10DQ9P241 1426 aa19.9■□□□□ 0.78
FDPS-221ENST00000612683 CICQ96RK0 1608 aaPredicted RBP19.89■□□□□ 0.77
FDPS-221ENST00000612683 NPC1L1Q9UHC9 1359 aa19.88■□□□□ 0.77
FDPS-221ENST00000612683 USP42Q9H9J4 1324 aaKnown RBP19.88■□□□□ 0.77
FDPS-221ENST00000612683 DPEP1P16444 411 aa19.88■□□□□ 0.77
FDPS-221ENST00000612683 FKBP8Q14318 412 aa19.88■□□□□ 0.77
FDPS-221ENST00000612683 PXDNLA1KZ92 1463 aa19.87■□□□□ 0.77
FDPS-221ENST00000612683 ZPR1O75312 459 aa19.87■□□□□ 0.77
FDPS-221ENST00000612683 CYP19A1P11511 503 aaPredicted RBP19.87■□□□□ 0.77
FDPS-221ENST00000612683 FCHSD2O94868 740 aa19.86■□□□□ 0.77
FDPS-221ENST00000612683 ARHGAP27Q6ZUM4 889 aa19.86■□□□□ 0.77
FDPS-221ENST00000612683 N4BP2Q86UW6 1770 aaPredicted RBP19.85■□□□□ 0.77
FDPS-221ENST00000612683 USPL1Q5W0Q7 1092 aa19.85■□□□□ 0.77
FDPS-221ENST00000612683 KIF13BQ9NQT8 1826 aa19.85■□□□□ 0.77
FDPS-221ENST00000612683 C4AP0C0L4 1744 aa19.85■□□□□ 0.77
FDPS-221ENST00000612683 TJP1Q07157 1748 aa19.85■□□□□ 0.77
FDPS-221ENST00000612683 C10orf71Q711Q0 1435 aa19.85■□□□□ 0.77
FDPS-221ENST00000612683 ADCY9O60503 1353 aa19.83■□□□□ 0.77
FDPS-221ENST00000612683 SOS1Q07889 1333 aaPredicted RBP19.83■□□□□ 0.77
FDPS-221ENST00000612683 GNAT3A8MTJ3 354 aa19.83■□□□□ 0.77
FDPS-221ENST00000612683 TM4SF1P30408 202 aa19.83■□□□□ 0.77
FDPS-221ENST00000612683 DDR1Q08345 913 aa19.83■□□□□ 0.77
FDPS-221ENST00000612683 TEFQ10587 303 aa19.83■□□□□ 0.77
FDPS-221ENST00000612683 TTC5Q8N0Z6 440 aa19.83■□□□□ 0.77
FDPS-221ENST00000612683 VSIG10Q8N0Z9 540 aa19.83■□□□□ 0.77
FDPS-221ENST00000612683 GAS2L2Q8NHY3 880 aa19.83■□□□□ 0.77
FDPS-221ENST00000612683 CFAP53Q96M91 514 aa19.83■□□□□ 0.77
FDPS-221ENST00000612683 VIRMAQ69YN4 1812 aaKnown RBP19.82■□□□□ 0.76
FDPS-221ENST00000612683 KCNA3P22001 575 aa19.82■□□□□ 0.76
FDPS-221ENST00000612683 IL17REQ8NFR9 667 aa19.82■□□□□ 0.76
FDPS-221ENST00000612683 PIM2Q9P1W9 311 aa19.82■□□□□ 0.76
FDPS-221ENST00000612683 ZBTB1Q9Y2K1 713 aa19.82■□□□□ 0.76
FDPS-221ENST00000612683 MRC1P22897 1456 aa19.81■□□□□ 0.76
FDPS-221ENST00000612683 CANXP27824 592 aaKnown RBP19.81■□□□□ 0.76
FDPS-221ENST00000612683 NARFQ9UHQ1 456 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms