RNA–Protein interactions for RNA: ENST00000612516.4

CCL23-201, Transcript of C-C motif chemokine ligand 23, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCL23, Length 569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL23-201ENST00000612516 U2AF1L5P0DN76 240 aaPredicted RBP8.13□□□□□ -1.11
CCL23-201ENST00000612516 PPP2R1AP30153 589 aa8.13□□□□□ -1.11
CCL23-201ENST00000612516 U2AF1Q01081 240 aaKnown RBP eCLIP8.13□□□□□ -1.11
CCL23-201ENST00000612516 COL23A1Q86Y22 540 aaPredicted RBP8.13□□□□□ -1.11
CCL23-201ENST00000612516 GAS2L2Q8NHY3 880 aa8.13□□□□□ -1.11
CCL23-201ENST00000612516 PAPPAQ13219 1627 aa8.12□□□□□ -1.11
CCL23-201ENST00000612516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.12□□□□□ -1.11
CCL23-201ENST00000612516 GNPATO15228 680 aa8.12□□□□□ -1.11
CCL23-201ENST00000612516 TEFQ10587 303 aa8.12□□□□□ -1.11
CCL23-201ENST00000612516 MTHFSDQ2M296 383 aaKnown RBP8.12□□□□□ -1.11
CCL23-201ENST00000612516 MSL1Q68DK7 614 aa8.12□□□□□ -1.11
CCL23-201ENST00000612516 LINC00116Q8NCU8 138 aa8.12□□□□□ -1.11
CCL23-201ENST00000612516 SYT17Q9BSW7 474 aa8.12□□□□□ -1.11
CCL23-201ENST00000612516 RTCBQ9Y3I0 505 aaKnown RBP8.12□□□□□ -1.11
CCL23-201ENST00000612516 TOGARAM1Q9Y4F4 1720 aa8.12□□□□□ -1.11
CCL23-201ENST00000612516 GNAT3A8MTJ3 354 aa8.11□□□□□ -1.11
CCL23-201ENST00000612516 RNMTO43148 476 aaKnown RBP8.11□□□□□ -1.11
CCL23-201ENST00000612516 SSFA2P28290 1259 aa8.11□□□□□ -1.11
CCL23-201ENST00000612516 RFC4P35249 363 aa8.11□□□□□ -1.11
CCL23-201ENST00000612516 ZEB1P37275 1124 aaPredicted RBP8.11□□□□□ -1.11
CCL23-201ENST00000612516 DDX10Q13206 875 aaKnown RBP8.11□□□□□ -1.11
CCL23-201ENST00000612516 ITPK1Q13572 414 aa8.11□□□□□ -1.11
CCL23-201ENST00000612516 TRAPPC3LQ5T215 181 aa8.11□□□□□ -1.11
CCL23-201ENST00000612516 PELP1Q8IZL8 1130 aaKnown RBP8.11□□□□□ -1.11
CCL23-201ENST00000612516 TTC5Q8N0Z6 440 aa8.11□□□□□ -1.11
CCL23-201ENST00000612516 RTF1Q92541 710 aaKnown RBP8.11□□□□□ -1.11
CCL23-201ENST00000612516 SLC52A2Q9HAB3 445 aa8.11□□□□□ -1.11
CCL23-201ENST00000612516 LGR6Q9HBX8 967 aa8.11□□□□□ -1.11
CCL23-201ENST00000612516 C5P01031 1676 aa8.11□□□□□ -1.11
CCL23-201ENST00000612516 FCHSD2O94868 740 aa8.1□□□□□ -1.11
CCL23-201ENST00000612516 PRKAR2BP31323 418 aa8.1□□□□□ -1.11
CCL23-201ENST00000612516 GPR162Q16538 588 aa8.1□□□□□ -1.11
CCL23-201ENST00000612516 RC3H1Q5TC82 1133 aaKnown RBP8.1□□□□□ -1.11
CCL23-201ENST00000612516 SGIP1Q9BQI5 828 aa8.1□□□□□ -1.11
CCL23-201ENST00000612516 PNNQ9H307 717 aaKnown RBP8.1□□□□□ -1.11
CCL23-201ENST00000612516 KDM6AO15550 1401 aaPredicted RBP8.1□□□□□ -1.11
CCL23-201ENST00000612516 QSER1Q2KHR3 1735 aa8.09□□□□□ -1.11
CCL23-201ENST00000612516 RPS6KA4O75676 772 aa8.09□□□□□ -1.11
CCL23-201ENST00000612516 RALBP1Q15311 655 aa8.09□□□□□ -1.11
CCL23-201ENST00000612516 C4BP0C0L5 1744 aa8.09□□□□□ -1.11
CCL23-201ENST00000612516 MAP3K5Q99683 1374 aa8.09□□□□□ -1.12
CCL23-201ENST00000612516 TAF1LQ8IZX4 1826 aa8.08□□□□□ -1.12
CCL23-201ENST00000612516 ADRA2BP18089 450 aa8.08□□□□□ -1.12
CCL23-201ENST00000612516 YY1P25490 414 aa8.08□□□□□ -1.12
CCL23-201ENST00000612516 SLC39A6Q13433 755 aa8.08□□□□□ -1.12
CCL23-201ENST00000612516 SMIM5Q71RC9 77 aa8.08□□□□□ -1.12
CCL23-201ENST00000612516 NPM2Q86SE8 214 aaKnown RBP8.08□□□□□ -1.12
CCL23-201ENST00000612516 NLGN1Q8N2Q7 840 aa8.08□□□□□ -1.12
CCL23-201ENST00000612516 CNTNAP4Q9C0A0 1308 aa8.07□□□□□ -1.12
CCL23-201ENST00000612516 STARD3NLO95772 234 aa8.07□□□□□ -1.12
CCL23-201ENST00000612516 CRKLP46109 303 aaKnown RBP8.07□□□□□ -1.12
CCL23-201ENST00000612516 ARHGEF1Q92888 912 aaKnown RBP8.07□□□□□ -1.12
CCL23-201ENST00000612516 PHACTR3Q96KR7 559 aa8.07□□□□□ -1.12
CCL23-201ENST00000612516 SLC4A9Q96Q91 983 aa8.07□□□□□ -1.12
CCL23-201ENST00000612516 RSPH6AQ9H0K4 717 aa8.07□□□□□ -1.12
CCL23-201ENST00000612516 CD2APQ9Y5K6 639 aa8.07□□□□□ -1.12
CCL23-201ENST00000612516 TUBGCP6Q96RT7 1819 aa8.07□□□□□ -1.12
CCL23-201ENST00000612516 SCN11AQ9UI33 1791 aa8.07□□□□□ -1.12
CCL23-201ENST00000612516 COL3A1P02461 1466 aaPredicted RBP8.06□□□□□ -1.12
CCL23-201ENST00000612516 MAPK8IP3Q9UPT6 1336 aa8.06□□□□□ -1.12
CCL23-201ENST00000612516 BTBD11A6QL63 1104 aa8.06□□□□□ -1.12
CCL23-201ENST00000612516 ZPR1O75312 459 aa8.06□□□□□ -1.12
CCL23-201ENST00000612516 DNAJC10Q8IXB1 793 aa8.06□□□□□ -1.12
CCL23-201ENST00000612516 VSIG10Q8N0Z9 540 aa8.06□□□□□ -1.12
CCL23-201ENST00000612516 IL17REQ8NFR9 667 aa8.06□□□□□ -1.12
CCL23-201ENST00000612516 TEX13AQ9BXU3 409 aaPredicted RBP8.06□□□□□ -1.12
CCL23-201ENST00000612516 CCDC87Q9NVE4 849 aa8.06□□□□□ -1.12
CCL23-201ENST00000612516 PARP3Q9Y6F1 533 aa8.06□□□□□ -1.12
CCL23-201ENST00000612516 HTATSF1O43719 755 aaKnown RBP8.05□□□□□ -1.12
CCL23-201ENST00000612516 MMP10P09238 476 aa8.05□□□□□ -1.12
CCL23-201ENST00000612516 ZNF790Q6PG37 636 aa8.05□□□□□ -1.12
CCL23-201ENST00000612516 AMIGO3Q86WK7 504 aa8.05□□□□□ -1.12
CCL23-201ENST00000612516 FMNL2Q96PY5 1086 aa8.05□□□□□ -1.12
CCL23-201ENST00000612516 UBR3Q6ZT12 1888 aa8.04□□□□□ -1.12
CCL23-201ENST00000612516 GRIN3BO60391 1043 aa8.04□□□□□ -1.12
CCL23-201ENST00000612516 CYP19A1P11511 503 aaPredicted RBP8.04□□□□□ -1.12
CCL23-201ENST00000612516 CANXP27824 592 aaKnown RBP8.04□□□□□ -1.12
CCL23-201ENST00000612516 WDR43Q15061 677 aaKnown RBP eCLIP8.04□□□□□ -1.12
CCL23-201ENST00000612516 INTS5Q6P9B9 1019 aaKnown RBP8.04□□□□□ -1.12
CCL23-201ENST00000612516 MCM10Q7L590 875 aa8.04□□□□□ -1.12
CCL23-201ENST00000612516 NLGN2Q8NFZ4 835 aa8.04□□□□□ -1.12
CCL23-201ENST00000612516 ZNF330Q9Y3S2 320 aaPredicted RBP8.04□□□□□ -1.12
CCL23-201ENST00000612516 MYBBP1AQ9BQG0 1328 aaKnown RBP8.03□□□□□ -1.12
CCL23-201ENST00000612516 ZNF831Q5JPB2 1677 aa8.03□□□□□ -1.12
CCL23-201ENST00000612516 A0A087WZG4 1122 aa8.03□□□□□ -1.12
CCL23-201ENST00000612516 GYS1P13807 737 aa8.03□□□□□ -1.12
CCL23-201ENST00000612516 DCTN1Q14203 1278 aa8.03□□□□□ -1.12
CCL23-201ENST00000612516 TAF7Q15545 349 aaPredicted RBP8.03□□□□□ -1.12
CCL23-201ENST00000612516 ZNF496Q96IT1 587 aaPredicted RBP8.03□□□□□ -1.12
CCL23-201ENST00000612516 SRP68Q9UHB9 627 aaKnown RBP8.03□□□□□ -1.12
CCL23-201ENST00000612516 HEG1Q9ULI3 1381 aa8.02□□□□□ -1.13
CCL23-201ENST00000612516 VIRMAQ69YN4 1812 aaKnown RBP8.02□□□□□ -1.13
CCL23-201ENST00000612516 NFE2L2Q16236 605 aa8.02□□□□□ -1.13
CCL23-201ENST00000612516 PNISRQ8TF01 805 aaKnown RBP8.02□□□□□ -1.13
CCL23-201ENST00000612516 ZBTB1Q9Y2K1 713 aa8.02□□□□□ -1.13
CCL23-201ENST00000612516 USP42Q9H9J4 1324 aaKnown RBP8.02□□□□□ -1.13
CCL23-201ENST00000612516 MRC1P22897 1456 aa8.01□□□□□ -1.13
CCL23-201ENST00000612516 COL5A3P25940 1745 aaPredicted RBP8.01□□□□□ -1.13
CCL23-201ENST00000612516 COL24A1Q17RW2 1714 aa8.01□□□□□ -1.13
CCL23-201ENST00000612516 CEMIPQ8WUJ3 1361 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms