RNA–Protein interactions for RNA: ENST00000612229.4

PTPRT-209, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5 BASIC

Gene PTPRT, Length 11,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-209ENST00000612229 NACAP1Q9BZK3 213 aa8.09□□□□□ -1.11
PTPRT-209ENST00000612229 NKTRP30414 1462 aaKnown RBP8.09□□□□□ -1.11
PTPRT-209ENST00000612229 NEUROD6Q96NK8 337 aa8.09□□□□□ -1.11
PTPRT-209ENST00000612229 CETN1Q12798 172 aa8.09□□□□□ -1.12
PTPRT-209ENST00000612229 ZBTB17Q13105 803 aa8.09□□□□□ -1.12
PTPRT-209ENST00000612229 RAB34Q9BZG1 259 aa8.09□□□□□ -1.12
PTPRT-209ENST00000612229 CFAP65Q6ZU64 1925 aaKnown RBP8.09□□□□□ -1.12
PTPRT-209ENST00000612229 KRT222Q8N1A0 295 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 PPFIBP2Q8ND30 876 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 ANAPC4Q9UJX5 808 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 GTF2A1P52655 376 aaPredicted RBP8.08□□□□□ -1.12
PTPRT-209ENST00000612229 CFAP100Q494V2 611 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 IFFO1Q0D2I5 559 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 CCDC158Q5M9N0 1113 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 NOB1Q9ULX3 412 aaKnown RBP8.08□□□□□ -1.12
PTPRT-209ENST00000612229 ADAMTS8Q9UP79 889 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 KIF5AQ12840 1032 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 CEP128Q6ZU80 1094 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 PHAXQ9H814 394 aaKnown RBP8.08□□□□□ -1.12
PTPRT-209ENST00000612229 SH2B1Q9NRF2 756 aaPredicted RBP8.08□□□□□ -1.12
PTPRT-209ENST00000612229 FSD2A1L4K1 749 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 PPFIA2O75334 1257 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 SURF6O75683 361 aaKnown RBP8.08□□□□□ -1.12
PTPRT-209ENST00000612229 TUBB4AP04350 444 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 CTNNA3Q9UI47 895 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 PRPHP41219 470 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 KIAA1524Q8TCG1 905 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 PDRG1Q9NUG6 133 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 CASKIN1Q8WXD9 1431 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 TIAM1Q13009 1591 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 IKQ13123 557 aaPredicted RBP8.08□□□□□ -1.12
PTPRT-209ENST00000612229 GAS2L2Q8NHY3 880 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 CCDC171Q6TFL3 1326 aa8.08□□□□□ -1.12
PTPRT-209ENST00000612229 CCDC69A6NI79 296 aa8.07□□□□□ -1.12
PTPRT-209ENST00000612229 BLOC1S2Q6QNY1 142 aa8.07□□□□□ -1.12
PTPRT-209ENST00000612229 GPATCH11Q8N954 259 aa8.07□□□□□ -1.12
PTPRT-209ENST00000612229 WDHD1O75717 1129 aaPredicted RBP8.07□□□□□ -1.12
PTPRT-209ENST00000612229 UVSSAQ2YD98 709 aa8.07□□□□□ -1.12
PTPRT-209ENST00000612229 PRDM10Q9NQV6 1147 aa8.07□□□□□ -1.12
PTPRT-209ENST00000612229 CASTP20810 708 aaKnown RBP8.07□□□□□ -1.12
PTPRT-209ENST00000612229 USP37Q86T82 979 aa8.07□□□□□ -1.12
PTPRT-209ENST00000612229 NECTIN2Q92692 538 aa8.07□□□□□ -1.12
PTPRT-209ENST00000612229 CLIP2Q9UDT6 1046 aa8.07□□□□□ -1.12
PTPRT-209ENST00000612229 EIF5P55010 431 aaKnown RBP8.07□□□□□ -1.12
PTPRT-209ENST00000612229 CEP83Q9Y592 693 aa8.07□□□□□ -1.12
PTPRT-209ENST00000612229 TACC1O75410 805 aa8.07□□□□□ -1.12
PTPRT-209ENST00000612229 EVA1CP58658 441 aa8.07□□□□□ -1.12
PTPRT-209ENST00000612229 TANGO6Q9C0B7 1094 aa8.07□□□□□ -1.12
PTPRT-209ENST00000612229 KIF4AO95239 1232 aa8.07□□□□□ -1.12
PTPRT-209ENST00000612229 GOLIM4O00461 696 aa8.06□□□□□ -1.12
PTPRT-209ENST00000612229 STX1AQ16623 288 aa8.06□□□□□ -1.12
PTPRT-209ENST00000612229 ATF7IPQ6VMQ6 1270 aa8.06□□□□□ -1.12
PTPRT-209ENST00000612229 TCHPQ9BT92 498 aa8.06□□□□□ -1.12
PTPRT-209ENST00000612229 ARID4AP29374 1257 aaPredicted RBP8.06□□□□□ -1.12
PTPRT-209ENST00000612229 TOP1P11387 765 aaKnown RBP8.06□□□□□ -1.12
PTPRT-209ENST00000612229 TNNT1P13805 278 aa8.06□□□□□ -1.12
PTPRT-209ENST00000612229 FKBP15Q5T1M5 1219 aa8.06□□□□□ -1.12
PTPRT-209ENST00000612229 RNF187Q5TA31 235 aaPredicted RBP8.06□□□□□ -1.12
PTPRT-209ENST00000612229 HFM1A2PYH4 1435 aa8.06□□□□□ -1.12
PTPRT-209ENST00000612229 MNAT1P51948 309 aa8.06□□□□□ -1.12
PTPRT-209ENST00000612229 TICAM2Q86XR7 235 aa8.06□□□□□ -1.12
PTPRT-209ENST00000612229 GSTTP1A0A1W2PQM5 241 aa8.06□□□□□ -1.12
PTPRT-209ENST00000612229 IRX3P78415 501 aaPredicted RBP8.06□□□□□ -1.12
PTPRT-209ENST00000612229 DRC1Q96MC2 740 aa8.06□□□□□ -1.12
PTPRT-209ENST00000612229 IQCGQ9H095 443 aaKnown RBP8.06□□□□□ -1.12
PTPRT-209ENST00000612229 MINK1Q8N4C8 1332 aaPredicted RBP8.06□□□□□ -1.12
PTPRT-209ENST00000612229 SMARCC1Q92922 1105 aaPredicted RBP8.06□□□□□ -1.12
PTPRT-209ENST00000612229 PPP1R9BQ96SB3 815 aa8.06□□□□□ -1.12
PTPRT-209ENST00000612229 ZMYND15Q9H091 742 aa8.06□□□□□ -1.12
PTPRT-209ENST00000612229 ARHGAP5Q13017 1502 aa8.06□□□□□ -1.12
PTPRT-209ENST00000612229 PPP2R1AP30153 589 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 GABPB2Q8TAK5 448 aaPredicted RBP8.05□□□□□ -1.12
PTPRT-209ENST00000612229 HAUS2Q9NVX0 235 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 CLGNO14967 610 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 RNF168Q8IYW5 571 aaPredicted RBP8.05□□□□□ -1.12
PTPRT-209ENST00000612229 NCOA2Q15596 1464 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 ACTN2P35609 894 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 MAP3K9P80192 1104 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 MAP7D1Q3KQU3 841 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 MIPOL1Q8TD10 442 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 TSG101Q99816 390 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 GMNNO75496 209 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 PAFAH1B1P43034 410 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 CKAP4Q07065 602 aaKnown RBP8.05□□□□□ -1.12
PTPRT-209ENST00000612229 TCP11L2Q8N4U5 519 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 TTC39AQ5SRH9 613 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 CCDC174Q6PII3 467 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 JAKMIP2Q96AA8 810 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 RSRC1Q96IZ7 334 aaKnown RBP8.05□□□□□ -1.12
PTPRT-209ENST00000612229 ODF2LQ9ULJ1 636 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 RASAL2Q9UJF2 1139 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 FAM184BQ9ULE4 1060 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 ALDH3A1P30838 453 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 KIF6Q6ZMV9 814 aa8.05□□□□□ -1.12
PTPRT-209ENST00000612229 PRPF31Q8WWY3 499 aaKnown RBP8.05□□□□□ -1.12
PTPRT-209ENST00000612229 NDC80O14777 642 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 HS1BP3Q53T59 392 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 DHX37Q8IY37 1157 aaKnown RBP8.04□□□□□ -1.12
PTPRT-209ENST00000612229 GOLGA1Q92805 767 aa8.04□□□□□ -1.12
PTPRT-209ENST00000612229 VCXQ9H320 206 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms