RNA–Protein interactions for RNA: ENST00000612011.1

PVT1-221, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 169 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-221ENST00000612011 NKX1-1Q15270 411 aaPredicted RBP13.2□□□□□ -0.3
PVT1-221ENST00000612011 DUSP27Q5VZP5 1158 aa13.2□□□□□ -0.3
PVT1-221ENST00000612011 CFAP44Q96MT7 982 aa13.2□□□□□ -0.3
PVT1-221ENST00000612011 ZNF853P0CG23 659 aa13.19□□□□□ -0.3
PVT1-221ENST00000612011 SEPT12Q8IYM1 358 aa13.19□□□□□ -0.3
PVT1-221ENST00000612011 TRMT2AQ8IZ69 625 aaKnown RBP13.19□□□□□ -0.3
PVT1-221ENST00000612011 TSR2Q969E8 191 aaKnown RBP13.19□□□□□ -0.3
PVT1-221ENST00000612011 ONECUT3O60422 494 aaPredicted RBP13.18□□□□□ -0.3
PVT1-221ENST00000612011 TAF7Q15545 349 aaPredicted RBP13.18□□□□□ -0.3
PVT1-221ENST00000612011 MARCH10Q8NA82 808 aaPredicted RBP13.18□□□□□ -0.3
PVT1-221ENST00000612011 SLC52A2Q9HAB3 445 aa13.18□□□□□ -0.3
PVT1-221ENST00000612011 MBIPQ9NS73 344 aa13.18□□□□□ -0.3
PVT1-221ENST00000612011 RGS17Q9UGC6 210 aaPredicted RBP13.18□□□□□ -0.3
PVT1-221ENST00000612011 RGS12O14924 1447 aa13.18□□□□□ -0.3
PVT1-221ENST00000612011 LY75O60449 1722 aa13.18□□□□□ -0.3
PVT1-221ENST00000612011 TAF1LQ8IZX4 1826 aa13.18□□□□□ -0.3
PVT1-221ENST00000612011 TJP1Q07157 1748 aa13.17□□□□□ -0.3
PVT1-221ENST00000612011 TNS1Q9HBL0 1735 aaKnown RBP13.17□□□□□ -0.3
PVT1-221ENST00000612011 ERVV-2B6SEH9 535 aa13.17□□□□□ -0.3
PVT1-221ENST00000612011 CABP4P57796 275 aa13.17□□□□□ -0.3
PVT1-221ENST00000612011 TSPYL4Q9UJ04 414 aa13.17□□□□□ -0.3
PVT1-221ENST00000612011 ZNF831Q5JPB2 1677 aa13.16□□□□□ -0.3
PVT1-221ENST00000612011 CHL1O00533 1208 aa13.16□□□□□ -0.3
PVT1-221ENST00000612011 RXRBP28702 533 aa13.16□□□□□ -0.3
PVT1-221ENST00000612011 POTEAQ6S8J7 498 aa13.16□□□□□ -0.3
PVT1-221ENST00000612011 BABAM1Q9NWV8 329 aa13.16□□□□□ -0.3
PVT1-221ENST00000612011 MIS18AQ9NYP9 233 aa13.16□□□□□ -0.3
PVT1-221ENST00000612011 CICQ96RK0 1608 aaPredicted RBP13.16□□□□□ -0.3
PVT1-221ENST00000612011 COL5A3P25940 1745 aaPredicted RBP13.16□□□□□ -0.3
PVT1-221ENST00000612011 KCPQ6ZWJ8 1503 aa13.15□□□□□ -0.3
PVT1-221ENST00000612011 BTBD11A6QL63 1104 aa13.15□□□□□ -0.3
PVT1-221ENST00000612011 NFATC2IPQ8NCF5 419 aa13.15□□□□□ -0.3
PVT1-221ENST00000612011 TMOD3Q9NYL9 352 aa13.15□□□□□ -0.3
PVT1-221ENST00000612011 BCL9O00512 1426 aa13.14□□□□□ -0.31
PVT1-221ENST00000612011 EXOSC9Q06265 439 aaKnown RBP13.14□□□□□ -0.31
PVT1-221ENST00000612011 N4BP2Q86UW6 1770 aaPredicted RBP13.13□□□□□ -0.31
PVT1-221ENST00000612011 KRT27Q7Z3Y8 459 aa13.13□□□□□ -0.31
PVT1-221ENST00000612011 ACSBG1Q96GR2 724 aa13.13□□□□□ -0.31
PVT1-221ENST00000612011 FAM182BQ5T319 152 aa13.12□□□□□ -0.31
PVT1-221ENST00000612011 SYTL4Q96C24 671 aaPredicted RBP13.12□□□□□ -0.31
PVT1-221ENST00000612011 RGPD3A6NKT7 1758 aaPredicted RBP13.12□□□□□ -0.31
PVT1-221ENST00000612011 RGPD4Q7Z3J3 1758 aa13.12□□□□□ -0.31
PVT1-221ENST00000612011 KCNQ3O43525 872 aa13.11□□□□□ -0.31
PVT1-221ENST00000612011 SLC39A6Q13433 755 aa13.11□□□□□ -0.31
PVT1-221ENST00000612011 TTC5Q8N0Z6 440 aa13.11□□□□□ -0.31
PVT1-221ENST00000612011 CT47B1P0C2W7 299 aaPredicted RBP13.1□□□□□ -0.31
PVT1-221ENST00000612011 PRIM1P49642 420 aaKnown RBP13.1□□□□□ -0.31
PVT1-221ENST00000612011 EIF4A1P60842 406 aaKnown RBP13.1□□□□□ -0.31
PVT1-221ENST00000612011 KRT24Q2M2I5 525 aa13.1□□□□□ -0.31
PVT1-221ENST00000612011 TWISTNBQ3B726 338 aaPredicted RBP13.1□□□□□ -0.31
PVT1-221ENST00000612011 ZNF790Q6PG37 636 aa13.1□□□□□ -0.31
PVT1-221ENST00000612011 TSPYL6Q8N831 410 aa13.1□□□□□ -0.31
PVT1-221ENST00000612011 C8orf58Q8NAV2 365 aa13.1□□□□□ -0.31
PVT1-221ENST00000612011 PIGBQ92521 554 aa13.1□□□□□ -0.31
PVT1-221ENST00000612011 RCAN3Q9UKA8 241 aa13.1□□□□□ -0.31
PVT1-221ENST00000612011 RREB1Q92766 1687 aa13.09□□□□□ -0.31
PVT1-221ENST00000612011 MYH14Q7Z406 1995 aaKnown RBP13.09□□□□□ -0.31
PVT1-221ENST00000612011 ELL2O00472 640 aaPredicted RBP13.09□□□□□ -0.31
PVT1-221ENST00000612011 AFDNP55196 1824 aaKnown RBP13.09□□□□□ -0.31
PVT1-221ENST00000612011 ARFGEF2Q9Y6D5 1785 aa13.08□□□□□ -0.32
PVT1-221ENST00000612011 HEG1Q9ULI3 1381 aa13.07□□□□□ -0.32
PVT1-221ENST00000612011 KCNQ2O43526 872 aa13.07□□□□□ -0.32
PVT1-221ENST00000612011 VAMP4O75379 141 aa13.07□□□□□ -0.32
PVT1-221ENST00000612011 FAM196AQ6ZSG2 479 aa13.07□□□□□ -0.32
PVT1-221ENST00000612011 FMNL2Q96PY5 1086 aa13.07□□□□□ -0.32
PVT1-221ENST00000612011 ASAP1Q9ULH1 1129 aa13.07□□□□□ -0.32
PVT1-221ENST00000612011 NUP188Q5SRE5 1749 aa13.07□□□□□ -0.32
PVT1-221ENST00000612011 SOS1Q07889 1333 aaPredicted RBP13.07□□□□□ -0.32
PVT1-221ENST00000612011 ZNF496Q96IT1 587 aaPredicted RBP13.06□□□□□ -0.32
PVT1-221ENST00000612011 ATG3Q9NT62 314 aa13.06□□□□□ -0.32
PVT1-221ENST00000612011 ANKRD36CQ5JPF3 1778 aa13.06□□□□□ -0.32
PVT1-221ENST00000612011 TUBGCP6Q96RT7 1819 aa13.06□□□□□ -0.32
PVT1-221ENST00000612011 PALLDQ8WX93 1383 aa13.06□□□□□ -0.32
PVT1-221ENST00000612011 HOXB7P09629 217 aa13.05□□□□□ -0.32
PVT1-221ENST00000612011 RARSP54136 660 aaKnown RBP13.05□□□□□ -0.32
PVT1-221ENST00000612011 ZNF428Q96B54 188 aa13.05□□□□□ -0.32
PVT1-221ENST00000612011 RBM42Q9BTD8 480 aaKnown RBP13.05□□□□□ -0.32
PVT1-221ENST00000612011 NUP98P52948 1817 aa13.04□□□□□ -0.32
PVT1-221ENST00000612011 UBR3Q6ZT12 1888 aa13.04□□□□□ -0.32
PVT1-221ENST00000612011 PTCD1O75127 700 aaKnown RBP13.04□□□□□ -0.32
PVT1-221ENST00000612011 GIGYF1O75420 1035 aaPredicted RBP13.04□□□□□ -0.32
PVT1-221ENST00000612011 ALDH1L2Q3SY69 923 aa13.04□□□□□ -0.32
PVT1-221ENST00000612011 SMARCC1Q92922 1105 aaPredicted RBP13.04□□□□□ -0.32
PVT1-221ENST00000612011 BCL2L13Q9BXK5 485 aa13.04□□□□□ -0.32
PVT1-221ENST00000612011 SMC4Q9NTJ3 1288 aa13.04□□□□□ -0.32
PVT1-221ENST00000612011 SUPT16HQ9Y5B9 1047 aaKnown RBP13.04□□□□□ -0.32
PVT1-221ENST00000612011 BCORQ6W2J9 1755 aa13.04□□□□□ -0.32
PVT1-221ENST00000612011 C4BP0C0L5 1744 aa13.03□□□□□ -0.32
PVT1-221ENST00000612011 PRAMEF22A3QJZ6 481 aa13.03□□□□□ -0.32
PVT1-221ENST00000612011 BCAR3O75815 825 aa13.03□□□□□ -0.32
PVT1-221ENST00000612011 SNRPA1P09661 255 aaKnown RBP13.03□□□□□ -0.32
PVT1-221ENST00000612011 HDGFL1Q5TGJ6 251 aa13.03□□□□□ -0.32
PVT1-221ENST00000612011 PTF1AQ7RTS3 328 aa13.03□□□□□ -0.32
PVT1-221ENST00000612011 NECTIN2Q92692 538 aa13.03□□□□□ -0.32
PVT1-221ENST00000612011 C4AP0C0L4 1744 aa13.02□□□□□ -0.32
PVT1-221ENST00000612011 TCERG1O14776 1098 aaKnown RBP13.02□□□□□ -0.33
PVT1-221ENST00000612011 TRIM37O94972 964 aa13.02□□□□□ -0.33
PVT1-221ENST00000612011 EIF2S2P20042 333 aaKnown RBP13.02□□□□□ -0.33
PVT1-221ENST00000612011 CCDC30Q5VVM6 783 aa13.02□□□□□ -0.33
PVT1-221ENST00000612011 SSH1Q8WYL5 1049 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms