RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 ST20-MTHFSA0A0A6YYL1 179 aa19.3■□□□□ 0.68
LINC00116-203ENST00000611969 TNRC6CQ9HCJ0 1690 aaKnown RBP19.3■□□□□ 0.68
LINC00116-203ENST00000611969 A0A0G2JLW4 131 aa19.29■□□□□ 0.68
LINC00116-203ENST00000611969 NKX1-1Q15270 411 aaPredicted RBP19.29■□□□□ 0.68
LINC00116-203ENST00000611969 ASAP1Q9ULH1 1129 aa19.29■□□□□ 0.68
LINC00116-203ENST00000611969 KDRP35968 1356 aa19.29■□□□□ 0.68
LINC00116-203ENST00000611969 KIF24Q5T7B8 1368 aa19.29■□□□□ 0.68
LINC00116-203ENST00000611969 COL13A1Q5TAT6 717 aaPredicted RBP19.28■□□□□ 0.68
LINC00116-203ENST00000611969 KCPQ6ZWJ8 1503 aa19.27■□□□□ 0.68
LINC00116-203ENST00000611969 SBF1O95248 1867 aa19.27■□□□□ 0.68
LINC00116-203ENST00000611969 MYH14Q7Z406 1995 aaKnown RBP19.27■□□□□ 0.68
LINC00116-203ENST00000611969 ARHGAP27Q6ZUM4 889 aa19.27■□□□□ 0.68
LINC00116-203ENST00000611969 EMILIN1Q9Y6C2 1016 aa19.27■□□□□ 0.68
LINC00116-203ENST00000611969 DPEP1P16444 411 aa19.26■□□□□ 0.67
LINC00116-203ENST00000611969 ATP6V1AP38606 617 aa19.26■□□□□ 0.67
LINC00116-203ENST00000611969 TMOD3Q9NYL9 352 aa19.26■□□□□ 0.67
LINC00116-203ENST00000611969 TONSLQ96HA7 1378 aa19.25■□□□□ 0.67
LINC00116-203ENST00000611969 CAPN15O75808 1086 aa19.25■□□□□ 0.67
LINC00116-203ENST00000611969 KLRG1Q96E93 195 aa19.25■□□□□ 0.67
LINC00116-203ENST00000611969 PCNTO95613 3336 aa19.25■□□□□ 0.67
LINC00116-203ENST00000611969 TGFB2P61812 414 aa19.24■□□□□ 0.67
LINC00116-203ENST00000611969 RBM46Q8TBY0 533 aaKnown RBP19.24■□□□□ 0.67
LINC00116-203ENST00000611969 PLEKHG2Q9H7P9 1386 aa19.23■□□□□ 0.67
LINC00116-203ENST00000611969 FCHSD2O94868 740 aa19.23■□□□□ 0.67
LINC00116-203ENST00000611969 C9orf131Q5VYM1 1079 aa19.23■□□□□ 0.67
LINC00116-203ENST00000611969 JMYQ8N9B5 988 aa19.23■□□□□ 0.67
LINC00116-203ENST00000611969 ATG3Q9NT62 314 aa19.23■□□□□ 0.67
LINC00116-203ENST00000611969 SPG7Q9UQ90 795 aa19.23■□□□□ 0.67
LINC00116-203ENST00000611969 SLC4A9Q96Q91 983 aa19.22■□□□□ 0.67
LINC00116-203ENST00000611969 TJP1Q07157 1748 aa19.2■□□□□ 0.66
LINC00116-203ENST00000611969 GYS1P13807 737 aa19.2■□□□□ 0.66
LINC00116-203ENST00000611969 PHKG2P15735 406 aa19.2■□□□□ 0.66
LINC00116-203ENST00000611969 KCNA3P22001 575 aa19.2■□□□□ 0.66
LINC00116-203ENST00000611969 TMF1P82094 1093 aa19.2■□□□□ 0.66
LINC00116-203ENST00000611969 RTCBQ9Y3I0 505 aaKnown RBP19.2■□□□□ 0.66
LINC00116-203ENST00000611969 TRAPPC3LQ5T215 181 aa19.19■□□□□ 0.66
LINC00116-203ENST00000611969 C16orf71Q8IYS4 520 aaPredicted RBP19.19■□□□□ 0.66
LINC00116-203ENST00000611969 CCDC87Q9NVE4 849 aa19.19■□□□□ 0.66
LINC00116-203ENST00000611969 ADAMTS7Q9UKP4 1686 aa19.19■□□□□ 0.66
LINC00116-203ENST00000611969 TIAM2Q8IVF5 1701 aa19.19■□□□□ 0.66
LINC00116-203ENST00000611969 PPM1GO15355 546 aaPredicted RBP19.18■□□□□ 0.66
LINC00116-203ENST00000611969 NLGN1Q8N2Q7 840 aa19.18■□□□□ 0.66
LINC00116-203ENST00000611969 ARHGEF1Q92888 912 aaKnown RBP19.18■□□□□ 0.66
LINC00116-203ENST00000611969 EYA1Q99502 592 aa19.18■□□□□ 0.66
LINC00116-203ENST00000611969 SLC24A1O60721 1099 aa19.17■□□□□ 0.66
LINC00116-203ENST00000611969 FSTL1Q12841 308 aa19.17■□□□□ 0.66
LINC00116-203ENST00000611969 CARD14Q9BXL6 1004 aa19.17■□□□□ 0.66
LINC00116-203ENST00000611969 IFNL2Q8IZJ0 200 aa19.16■□□□□ 0.66
LINC00116-203ENST00000611969 TNS4Q8IZW8 715 aa19.16■□□□□ 0.66
LINC00116-203ENST00000611969 DCAF5Q96JK2 942 aa19.16■□□□□ 0.66
LINC00116-203ENST00000611969 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.16■□□□□ 0.66
LINC00116-203ENST00000611969 CNTNAP4Q9C0A0 1308 aa19.16■□□□□ 0.66
LINC00116-203ENST00000611969 DLEC1Q9Y238 1755 aa19.16■□□□□ 0.66
LINC00116-203ENST00000611969 RNF181Q9P0P0 153 aa19.15■□□□□ 0.66
LINC00116-203ENST00000611969 PARP3Q9Y6F1 533 aa19.15■□□□□ 0.66
LINC00116-203ENST00000611969 KDM6AO15550 1401 aaPredicted RBP19.15■□□□□ 0.66
LINC00116-203ENST00000611969 AFDNP55196 1824 aaKnown RBP19.14■□□□□ 0.65
LINC00116-203ENST00000611969 CCDC88AQ3V6T2 1871 aa19.14■□□□□ 0.65
LINC00116-203ENST00000611969 ADRA2BP18089 450 aa19.14■□□□□ 0.65
LINC00116-203ENST00000611969 RBM42Q9BTD8 480 aaKnown RBP19.14■□□□□ 0.65
LINC00116-203ENST00000611969 RRAGCQ9HB90 399 aa19.14■□□□□ 0.65
LINC00116-203ENST00000611969 WASHC2AQ641Q2 1341 aa19.14■□□□□ 0.65
LINC00116-203ENST00000611969 KDM2BQ8NHM5 1336 aa19.14■□□□□ 0.65
LINC00116-203ENST00000611969 RFC4P35249 363 aa19.13■□□□□ 0.65
LINC00116-203ENST00000611969 DDR1Q08345 913 aa19.13■□□□□ 0.65
LINC00116-203ENST00000611969 RPS6KA4O75676 772 aa19.12■□□□□ 0.65
LINC00116-203ENST00000611969 PRELPP51888 382 aa19.12■□□□□ 0.65
LINC00116-203ENST00000611969 RC3H1Q5TC82 1133 aaKnown RBP19.12■□□□□ 0.65
LINC00116-203ENST00000611969 PIM2Q9P1W9 311 aa19.12■□□□□ 0.65
LINC00116-203ENST00000611969 SRP68Q9UHB9 627 aaKnown RBP19.12■□□□□ 0.65
LINC00116-203ENST00000611969 CHRNA5P30532 468 aa19.11■□□□□ 0.65
LINC00116-203ENST00000611969 DALRD3Q5D0E6 543 aaKnown RBP19.11■□□□□ 0.65
LINC00116-203ENST00000611969 FKBP8Q14318 412 aa19.1■□□□□ 0.65
LINC00116-203ENST00000611969 NRXN2Q9P2S2 1712 aa19.09■□□□□ 0.65
LINC00116-203ENST00000611969 RASSF7Q02833 373 aa19.09■□□□□ 0.65
LINC00116-203ENST00000611969 SMC1BQ8NDV3 1235 aa19.09■□□□□ 0.65
LINC00116-203ENST00000611969 TIMELESSQ9UNS1 1208 aa19.09■□□□□ 0.65
LINC00116-203ENST00000611969 SCN11AQ9UI33 1791 aa19.09■□□□□ 0.65
LINC00116-203ENST00000611969 USP42Q9H9J4 1324 aaKnown RBP19.08■□□□□ 0.65
LINC00116-203ENST00000611969 EIF4A2Q14240 407 aaKnown RBP19.08■□□□□ 0.64
LINC00116-203ENST00000611969 VIRMAQ69YN4 1812 aaKnown RBP19.07■□□□□ 0.64
LINC00116-203ENST00000611969 ERVV-2B6SEH9 535 aa19.07■□□□□ 0.64
LINC00116-203ENST00000611969 HSPA1AP0DMV8 641 aaKnown RBP19.07■□□□□ 0.64
LINC00116-203ENST00000611969 HSPA1BP0DMV9 641 aaKnown RBP19.07■□□□□ 0.64
LINC00116-203ENST00000611969 POLKQ9UBT6 870 aa19.07■□□□□ 0.64
LINC00116-203ENST00000611969 CRKLP46109 303 aaKnown RBP19.06■□□□□ 0.64
LINC00116-203ENST00000611969 PTCD1O75127 700 aaKnown RBP19.05■□□□□ 0.64
LINC00116-203ENST00000611969 CLSPNQ9HAW4 1339 aa19.04■□□□□ 0.64
LINC00116-203ENST00000611969 POLRMTO00411 1230 aaKnown RBP19.04■□□□□ 0.64
LINC00116-203ENST00000611969 CABP4P57796 275 aa19.02■□□□□ 0.64
LINC00116-203ENST00000611969 CDCA8Q53HL2 280 aa19.02■□□□□ 0.64
LINC00116-203ENST00000611969 ZNF530Q6P9A1 599 aaPredicted RBP19.02■□□□□ 0.64
LINC00116-203ENST00000611969 ANKRD31Q8N7Z5 1873 aa19.02■□□□□ 0.64
LINC00116-203ENST00000611969 DICER1Q9UPY3 1922 aaKnown RBP19.02■□□□□ 0.63
LINC00116-203ENST00000611969 ZC3H4Q9UPT8 1303 aaKnown RBP19.01■□□□□ 0.63
LINC00116-203ENST00000611969 COL11A2P13942 1736 aaPredicted RBP19.01■□□□□ 0.63
LINC00116-203ENST00000611969 TNNT2P45379 298 aaPredicted RBP19.01■□□□□ 0.63
LINC00116-203ENST00000611969 HSP90AB1P08238 724 aaKnown RBP19■□□□□ 0.63
LINC00116-203ENST00000611969 TM4SF1P30408 202 aa18.99■□□□□ 0.63
LINC00116-203ENST00000611969 INTS5Q6P9B9 1019 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms