RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 SIK1P57059 783 aa11.7□□□□□ -0.54
SNCA-212ENST00000611107 PLEKHG2Q9H7P9 1386 aa11.69□□□□□ -0.54
SNCA-212ENST00000611107 U2SURPO15042 1029 aaKnown RBP11.69□□□□□ -0.54
SNCA-212ENST00000611107 RNMTO43148 476 aaKnown RBP11.69□□□□□ -0.54
SNCA-212ENST00000611107 AMOTQ4VCS5 1084 aa11.69□□□□□ -0.54
SNCA-212ENST00000611107 MSL1Q68DK7 614 aa11.69□□□□□ -0.54
SNCA-212ENST00000611107 NFATC2IPQ8NCF5 419 aa11.69□□□□□ -0.54
SNCA-212ENST00000611107 DCAF5Q96JK2 942 aa11.69□□□□□ -0.54
SNCA-212ENST00000611107 MTFR1LQ9H019 292 aa11.69□□□□□ -0.54
SNCA-212ENST00000611107 TFCP2L1Q9NZI6 479 aa11.69□□□□□ -0.54
SNCA-212ENST00000611107 SIPA1L3O60292 1781 aaPredicted RBP11.69□□□□□ -0.54
SNCA-212ENST00000611107 MRC1P22897 1456 aa11.69□□□□□ -0.54
SNCA-212ENST00000611107 ERVV-2B6SEH9 535 aa11.68□□□□□ -0.54
SNCA-212ENST00000611107 SLC39A6Q13433 755 aa11.68□□□□□ -0.54
SNCA-212ENST00000611107 RSPH6AQ9H0K4 717 aa11.68□□□□□ -0.54
SNCA-212ENST00000611107 AKAP4Q5JQC9 854 aa11.67□□□□□ -0.54
SNCA-212ENST00000611107 IL17REQ8NFR9 667 aa11.67□□□□□ -0.54
SNCA-212ENST00000611107 SMARCC1Q92922 1105 aaPredicted RBP11.67□□□□□ -0.54
SNCA-212ENST00000611107 ZNF831Q5JPB2 1677 aa11.67□□□□□ -0.54
SNCA-212ENST00000611107 KCPQ6ZWJ8 1503 aa11.66□□□□□ -0.54
SNCA-212ENST00000611107 PTCD1O75127 700 aaKnown RBP11.66□□□□□ -0.54
SNCA-212ENST00000611107 PHF14O94880 888 aa11.66□□□□□ -0.54
SNCA-212ENST00000611107 PRKAR2BP31323 418 aa11.66□□□□□ -0.54
SNCA-212ENST00000611107 ATP6V1AP38606 617 aa11.66□□□□□ -0.54
SNCA-212ENST00000611107 CABP4P57796 275 aa11.66□□□□□ -0.54
SNCA-212ENST00000611107 C1orf141Q5JVX7 400 aa11.66□□□□□ -0.54
SNCA-212ENST00000611107 RBM42Q9BTD8 480 aaKnown RBP11.66□□□□□ -0.54
SNCA-212ENST00000611107 FHDC1Q9C0D6 1143 aaPredicted RBP11.66□□□□□ -0.54
SNCA-212ENST00000611107 UBR2Q8IWV8 1755 aa11.66□□□□□ -0.54
SNCA-212ENST00000611107 C4AP0C0L4 1744 aa11.66□□□□□ -0.54
SNCA-212ENST00000611107 SLC52A2Q9HAB3 445 aa11.65□□□□□ -0.54
SNCA-212ENST00000611107 PPP1R1BQ9UD71 204 aaPredicted RBP11.65□□□□□ -0.54
SNCA-212ENST00000611107 MSH5O43196 834 aa11.64□□□□□ -0.55
SNCA-212ENST00000611107 HSP90AB1P08238 724 aaKnown RBP11.64□□□□□ -0.55
SNCA-212ENST00000611107 ARXQ96QS3 562 aa11.64□□□□□ -0.55
SNCA-212ENST00000611107 SYT17Q9BSW7 474 aa11.64□□□□□ -0.55
SNCA-212ENST00000611107 CICQ96RK0 1608 aaPredicted RBP11.64□□□□□ -0.55
SNCA-212ENST00000611107 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.63□□□□□ -0.55
SNCA-212ENST00000611107 KCNQ3O43525 872 aa11.63□□□□□ -0.55
SNCA-212ENST00000611107 NLGN2Q8NFZ4 835 aa11.63□□□□□ -0.55
SNCA-212ENST00000611107 GNPATO15228 680 aa11.62□□□□□ -0.55
SNCA-212ENST00000611107 U2AF1L5P0DN76 240 aaPredicted RBP11.62□□□□□ -0.55
SNCA-212ENST00000611107 U2AF1Q01081 240 aaKnown RBP eCLIP11.62□□□□□ -0.55
SNCA-212ENST00000611107 DCTN1Q14203 1278 aa11.62□□□□□ -0.55
SNCA-212ENST00000611107 DNAJC10Q8IXB1 793 aa11.62□□□□□ -0.55
SNCA-212ENST00000611107 SLC16A10Q8TF71 515 aa11.62□□□□□ -0.55
SNCA-212ENST00000611107 AK7Q96M32 723 aa11.62□□□□□ -0.55
SNCA-212ENST00000611107 MAP3K5Q99683 1374 aa11.62□□□□□ -0.55
SNCA-212ENST00000611107 UTRNP46939 3433 aa11.61□□□□□ -0.55
SNCA-212ENST00000611107 RALBP1Q15311 655 aa11.61□□□□□ -0.55
SNCA-212ENST00000611107 INTS5Q6P9B9 1019 aaKnown RBP11.61□□□□□ -0.55
SNCA-212ENST00000611107 PLEKHF1Q96S99 279 aa11.61□□□□□ -0.55
SNCA-212ENST00000611107 PRKRIP1Q9H875 184 aaPredicted RBP11.61□□□□□ -0.55
SNCA-212ENST00000611107 MYBBP1AQ9BQG0 1328 aaKnown RBP11.6□□□□□ -0.55
SNCA-212ENST00000611107 CEMIPQ8WUJ3 1361 aa11.6□□□□□ -0.55
SNCA-212ENST00000611107 CRKLP46109 303 aaKnown RBP11.6□□□□□ -0.55
SNCA-212ENST00000611107 MCM10Q7L590 875 aa11.6□□□□□ -0.55
SNCA-212ENST00000611107 CFAP53Q96M91 514 aa11.6□□□□□ -0.55
SNCA-212ENST00000611107 KIAA1551Q9HCM1 1747 aa11.6□□□□□ -0.55
SNCA-212ENST00000611107 GNAT3A8MTJ3 354 aa11.59□□□□□ -0.55
SNCA-212ENST00000611107 SSFA2P28290 1259 aa11.59□□□□□ -0.55
SNCA-212ENST00000611107 ARHGEF1Q92888 912 aaKnown RBP11.59□□□□□ -0.55
SNCA-212ENST00000611107 SRP68Q9UHB9 627 aaKnown RBP11.59□□□□□ -0.55
SNCA-212ENST00000611107 CNTNAP4Q9C0A0 1308 aa11.59□□□□□ -0.55
SNCA-212ENST00000611107 PRAMEF22A3QJZ6 481 aa11.58□□□□□ -0.56
SNCA-212ENST00000611107 RPS6KA4O75676 772 aa11.58□□□□□ -0.56
SNCA-212ENST00000611107 CYP19A1P11511 503 aaPredicted RBP11.58□□□□□ -0.56
SNCA-212ENST00000611107 RC3H1Q5TC82 1133 aaKnown RBP11.58□□□□□ -0.56
SNCA-212ENST00000611107 KLHL34Q8N239 644 aa11.58□□□□□ -0.56
SNCA-212ENST00000611107 ZNF496Q96IT1 587 aaPredicted RBP11.58□□□□□ -0.56
SNCA-212ENST00000611107 FCHSD2O94868 740 aa11.57□□□□□ -0.56
SNCA-212ENST00000611107 GYS1P13807 737 aa11.57□□□□□ -0.56
SNCA-212ENST00000611107 CCDC184Q52MB2 194 aa11.57□□□□□ -0.56
SNCA-212ENST00000611107 GAS2L2Q8NHY3 880 aa11.57□□□□□ -0.56
SNCA-212ENST00000611107 THUMPD2Q9BTF0 503 aaKnown RBP11.57□□□□□ -0.56
SNCA-212ENST00000611107 N4BP2Q86UW6 1770 aaPredicted RBP11.56□□□□□ -0.56
SNCA-212ENST00000611107 GOLGB1Q14789 3259 aaKnown RBP11.56□□□□□ -0.56
SNCA-212ENST00000611107 KIF13BQ9NQT8 1826 aa11.56□□□□□ -0.56
SNCA-212ENST00000611107 MIS18AQ9NYP9 233 aa11.56□□□□□ -0.56
SNCA-212ENST00000611107 WWC3Q9ULE0 1092 aa11.56□□□□□ -0.56
SNCA-212ENST00000611107 NUDCQ9Y266 331 aa11.56□□□□□ -0.56
SNCA-212ENST00000611107 ZBTB1Q9Y2K1 713 aa11.56□□□□□ -0.56
SNCA-212ENST00000611107 KDM3BQ7LBC6 1761 aa11.55□□□□□ -0.56
SNCA-212ENST00000611107 YBX3P16989 372 aaKnown RBP eCLIP11.55□□□□□ -0.56
SNCA-212ENST00000611107 POLD1P28340 1107 aa11.55□□□□□ -0.56
SNCA-212ENST00000611107 PIP4K2AP48426 406 aaPredicted RBP11.55□□□□□ -0.56
SNCA-212ENST00000611107 ZNF790Q6PG37 636 aa11.55□□□□□ -0.56
SNCA-212ENST00000611107 FLAD1Q8NFF5 587 aa11.55□□□□□ -0.56
SNCA-212ENST00000611107 BCL2L12Q9HB09 334 aa11.55□□□□□ -0.56
SNCA-212ENST00000611107 RTCBQ9Y3I0 505 aaKnown RBP11.55□□□□□ -0.56
SNCA-212ENST00000611107 SOS1Q07889 1333 aaPredicted RBP11.55□□□□□ -0.56
SNCA-212ENST00000611107 AFDNP55196 1824 aaKnown RBP11.54□□□□□ -0.56
SNCA-212ENST00000611107 MMP10P09238 476 aa11.54□□□□□ -0.56
SNCA-212ENST00000611107 DDR1Q08345 913 aa11.54□□□□□ -0.56
SNCA-212ENST00000611107 FKBP8Q14318 412 aa11.54□□□□□ -0.56
SNCA-212ENST00000611107 TRAPPC3LQ5T215 181 aa11.54□□□□□ -0.56
SNCA-212ENST00000611107 CCDC87Q9NVE4 849 aa11.54□□□□□ -0.56
SNCA-212ENST00000611107 CHD4Q14839 1912 aa11.54□□□□□ -0.56
SNCA-212ENST00000611107 HEG1Q9ULI3 1381 aa11.54□□□□□ -0.56
SNCA-212ENST00000611107 A1BGP04217 495 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms