RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 KDM6AO15550 1401 aaPredicted RBP23.51■■□□□ 1.35
PRKN-208ENST00000610470 CABP4P57796 275 aa23.51■■□□□ 1.35
PRKN-208ENST00000610470 LINC00116Q8NCU8 138 aa23.51■■□□□ 1.35
PRKN-208ENST00000610470 SSFA2P28290 1259 aa23.5■■□□□ 1.35
PRKN-208ENST00000610470 MSL1Q68DK7 614 aa23.5■■□□□ 1.35
PRKN-208ENST00000610470 PHF14O94880 888 aa23.49■■□□□ 1.35
PRKN-208ENST00000610470 ITPK1Q13572 414 aa23.49■■□□□ 1.35
PRKN-208ENST00000610470 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.48■■□□□ 1.35
PRKN-208ENST00000610470 DIAPH1O60610 1272 aaKnown RBP23.48■■□□□ 1.35
PRKN-208ENST00000610470 UBR3Q6ZT12 1888 aa23.47■■□□□ 1.35
PRKN-208ENST00000610470 RBM42Q9BTD8 480 aaKnown RBP23.47■■□□□ 1.35
PRKN-208ENST00000610470 UTRNP46939 3433 aa23.47■■□□□ 1.35
PRKN-208ENST00000610470 GNPATO15228 680 aa23.46■■□□□ 1.35
PRKN-208ENST00000610470 AKAP4Q5JQC9 854 aa23.46■■□□□ 1.35
PRKN-208ENST00000610470 AMIGO3Q86WK7 504 aa23.46■■□□□ 1.35
PRKN-208ENST00000610470 HMOX1P09601 288 aa23.45■■□□□ 1.34
PRKN-208ENST00000610470 CNGB1Q14028 1251 aaPredicted RBP23.45■■□□□ 1.34
PRKN-208ENST00000610470 GPR162Q16538 588 aa23.45■■□□□ 1.34
PRKN-208ENST00000610470 ZNF831Q5JPB2 1677 aa23.44■■□□□ 1.34
PRKN-208ENST00000610470 SMIM5Q71RC9 77 aa23.43■■□□□ 1.34
PRKN-208ENST00000610470 NFATC2IPQ8NCF5 419 aa23.43■■□□□ 1.34
PRKN-208ENST00000610470 NLGN2Q8NFZ4 835 aa23.43■■□□□ 1.34
PRKN-208ENST00000610470 SLC4A9Q96Q91 983 aa23.42■■□□□ 1.34
PRKN-208ENST00000610470 RC3H1Q5TC82 1133 aaKnown RBP23.41■■□□□ 1.34
PRKN-208ENST00000610470 RTCBQ9Y3I0 505 aaKnown RBP23.41■■□□□ 1.34
PRKN-208ENST00000610470 PELP1Q8IZL8 1130 aaKnown RBP23.4■■□□□ 1.34
PRKN-208ENST00000610470 CD2APQ9Y5K6 639 aa23.4■■□□□ 1.34
PRKN-208ENST00000610470 CNTNAP4Q9C0A0 1308 aa23.39■■□□□ 1.34
PRKN-208ENST00000610470 COL3A1P02461 1466 aaPredicted RBP23.39■■□□□ 1.34
PRKN-208ENST00000610470 TRAPPC3LQ5T215 181 aa23.39■■□□□ 1.33
PRKN-208ENST00000610470 SCN11AQ9UI33 1791 aa23.39■■□□□ 1.33
PRKN-208ENST00000610470 PTCD1O75127 700 aaKnown RBP23.38■■□□□ 1.33
PRKN-208ENST00000610470 SLC52A2Q9HAB3 445 aa23.38■■□□□ 1.33
PRKN-208ENST00000610470 U2SURPO15042 1029 aaKnown RBP23.37■■□□□ 1.33
PRKN-208ENST00000610470 ADRA2BP18089 450 aa23.37■■□□□ 1.33
PRKN-208ENST00000610470 MTHFSDQ2M296 383 aaKnown RBP23.37■■□□□ 1.33
PRKN-208ENST00000610470 COL5A3P25940 1745 aaPredicted RBP23.36■■□□□ 1.33
PRKN-208ENST00000610470 RNMTO43148 476 aaKnown RBP23.36■■□□□ 1.33
PRKN-208ENST00000610470 CFAP53Q96M91 514 aa23.36■■□□□ 1.33
PRKN-208ENST00000610470 LGR6Q9HBX8 967 aa23.36■■□□□ 1.33
PRKN-208ENST00000610470 RPS6KA4O75676 772 aa23.35■■□□□ 1.33
PRKN-208ENST00000610470 CHD4Q14839 1912 aa23.35■■□□□ 1.33
PRKN-208ENST00000610470 MRC1P22897 1456 aa23.34■■□□□ 1.33
PRKN-208ENST00000610470 GRIN3BO60391 1043 aa23.33■■□□□ 1.33
PRKN-208ENST00000610470 GOLGB1Q14789 3259 aaKnown RBP23.33■■□□□ 1.32
PRKN-208ENST00000610470 RFC4P35249 363 aa23.32■■□□□ 1.32
PRKN-208ENST00000610470 NLGN1Q8N2Q7 840 aa23.32■■□□□ 1.32
PRKN-208ENST00000610470 ARHGEF1Q92888 912 aaKnown RBP23.32■■□□□ 1.32
PRKN-208ENST00000610470 CRKLP46109 303 aaKnown RBP23.31■■□□□ 1.32
PRKN-208ENST00000610470 GAS2L2Q8NHY3 880 aa23.31■■□□□ 1.32
PRKN-208ENST00000610470 CICQ96RK0 1608 aaPredicted RBP23.3■■□□□ 1.32
PRKN-208ENST00000610470 MMP10P09238 476 aa23.3■■□□□ 1.32
PRKN-208ENST00000610470 YBX3P16989 372 aaKnown RBP eCLIP23.3■■□□□ 1.32
PRKN-208ENST00000610470 ZNF784Q8NCA9 323 aaPredicted RBP23.3■■□□□ 1.32
PRKN-208ENST00000610470 NUDCQ9Y266 331 aa23.3■■□□□ 1.32
PRKN-208ENST00000610470 ADAMTS7Q9UKP4 1686 aa23.29■■□□□ 1.32
PRKN-208ENST00000610470 TJP1Q07157 1748 aa23.28■■□□□ 1.32
PRKN-208ENST00000610470 PPP2R1AP30153 589 aa23.28■■□□□ 1.32
PRKN-208ENST00000610470 SLC39A6Q13433 755 aa23.28■■□□□ 1.32
PRKN-208ENST00000610470 MYH14Q7Z406 1995 aaKnown RBP23.28■■□□□ 1.32
PRKN-208ENST00000610470 VIRMAQ69YN4 1812 aaKnown RBP23.27■■□□□ 1.32
PRKN-208ENST00000610470 GNAT3A8MTJ3 354 aa23.27■■□□□ 1.32
PRKN-208ENST00000610470 GYS1P13807 737 aa23.27■■□□□ 1.32
PRKN-208ENST00000610470 DNAJC10Q8IXB1 793 aa23.26■■□□□ 1.31
PRKN-208ENST00000610470 PRKAR2BP31323 418 aa23.24■■□□□ 1.31
PRKN-208ENST00000610470 TEFQ10587 303 aa23.24■■□□□ 1.31
PRKN-208ENST00000610470 INTS5Q6P9B9 1019 aaKnown RBP23.24■■□□□ 1.31
PRKN-208ENST00000610470 VSIG10Q8N0Z9 540 aa23.24■■□□□ 1.31
PRKN-208ENST00000610470 RSPH6AQ9H0K4 717 aa23.24■■□□□ 1.31
PRKN-208ENST00000610470 CCDC87Q9NVE4 849 aa23.24■■□□□ 1.31
PRKN-208ENST00000610470 KCPQ6ZWJ8 1503 aa23.23■■□□□ 1.31
PRKN-208ENST00000610470 TTC5Q8N0Z6 440 aa23.23■■□□□ 1.31
PRKN-208ENST00000610470 PARP3Q9Y6F1 533 aa23.23■■□□□ 1.31
PRKN-208ENST00000610470 C4AP0C0L4 1744 aa23.22■■□□□ 1.31
PRKN-208ENST00000610470 U2AF1L5P0DN76 240 aaPredicted RBP23.22■■□□□ 1.31
PRKN-208ENST00000610470 CYP19A1P11511 503 aaPredicted RBP23.22■■□□□ 1.31
PRKN-208ENST00000610470 U2AF1Q01081 240 aaKnown RBP eCLIP23.22■■□□□ 1.31
PRKN-208ENST00000610470 IL17REQ8NFR9 667 aa23.22■■□□□ 1.31
PRKN-208ENST00000610470 USP42Q9H9J4 1324 aaKnown RBP23.22■■□□□ 1.31
PRKN-208ENST00000610470 TGFB2P61812 414 aa23.2■■□□□ 1.3
PRKN-208ENST00000610470 PHACTR3Q96KR7 559 aa23.2■■□□□ 1.3
PRKN-208ENST00000610470 SRP68Q9UHB9 627 aaKnown RBP23.2■■□□□ 1.3
PRKN-208ENST00000610470 C10orf71Q711Q0 1435 aa23.19■■□□□ 1.3
PRKN-208ENST00000610470 SOS1Q07889 1333 aaPredicted RBP23.19■■□□□ 1.3
PRKN-208ENST00000610470 FCHSD2O94868 740 aa23.19■■□□□ 1.3
PRKN-208ENST00000610470 ZPR1O75312 459 aa23.18■■□□□ 1.3
PRKN-208ENST00000610470 KIF13BQ9NQT8 1826 aa23.17■■□□□ 1.3
PRKN-208ENST00000610470 UBR2Q8IWV8 1755 aa23.17■■□□□ 1.3
PRKN-208ENST00000610470 FKBP8Q14318 412 aa23.17■■□□□ 1.3
PRKN-208ENST00000610470 ZNF790Q6PG37 636 aa23.17■■□□□ 1.3
PRKN-208ENST00000610470 WWC3Q9ULE0 1092 aa23.17■■□□□ 1.3
PRKN-208ENST00000610470 PXDNLA1KZ92 1463 aa23.17■■□□□ 1.3
PRKN-208ENST00000610470 CEMIPQ8WUJ3 1361 aa23.16■■□□□ 1.3
PRKN-208ENST00000610470 STARD3NLO95772 234 aa23.16■■□□□ 1.3
PRKN-208ENST00000610470 ZBTB1Q9Y2K1 713 aa23.16■■□□□ 1.3
PRKN-208ENST00000610470 TEX13AQ9BXU3 409 aaPredicted RBP23.15■■□□□ 1.3
PRKN-208ENST00000610470 COL15A1P39059 1388 aa23.14■■□□□ 1.3
PRKN-208ENST00000610470 USPL1Q5W0Q7 1092 aa23.14■■□□□ 1.29
PRKN-208ENST00000610470 RTF1Q92541 710 aaKnown RBP23.14■■□□□ 1.29
PRKN-208ENST00000610470 ZNF496Q96IT1 587 aaPredicted RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms