RNA–Protein interactions for RNA: ENST00000610369.4

TARDBP-211, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-211ENST00000610369 AKAP4Q5JQC9 854 aa13.07□□□□□ -0.32
TARDBP-211ENST00000610369 RC3H1Q5TC82 1133 aaKnown RBP13.07□□□□□ -0.32
TARDBP-211ENST00000610369 RBM42Q9BTD8 480 aaKnown RBP13.07□□□□□ -0.32
TARDBP-211ENST00000610369 CD2APQ9Y5K6 639 aa13.07□□□□□ -0.32
TARDBP-211ENST00000610369 GNPATO15228 680 aa13.06□□□□□ -0.32
TARDBP-211ENST00000610369 PHF14O94880 888 aa13.06□□□□□ -0.32
TARDBP-211ENST00000610369 MSL1Q68DK7 614 aa13.06□□□□□ -0.32
TARDBP-211ENST00000610369 NFATC2IPQ8NCF5 419 aa13.06□□□□□ -0.32
TARDBP-211ENST00000610369 TOGARAM1Q9Y4F4 1720 aa13.05□□□□□ -0.32
TARDBP-211ENST00000610369 ADRA2BP18089 450 aa13.05□□□□□ -0.32
TARDBP-211ENST00000610369 TRAPPC3LQ5T215 181 aa13.05□□□□□ -0.32
TARDBP-211ENST00000610369 RTCBQ9Y3I0 505 aaKnown RBP13.05□□□□□ -0.32
TARDBP-211ENST00000610369 UTRNP46939 3433 aa13.04□□□□□ -0.32
TARDBP-211ENST00000610369 ITGB4P16144 1822 aa13.04□□□□□ -0.32
TARDBP-211ENST00000610369 GRIN3BO60391 1043 aa13.04□□□□□ -0.32
TARDBP-211ENST00000610369 HMOX1P09601 288 aa13.04□□□□□ -0.32
TARDBP-211ENST00000610369 AMIGO3Q86WK7 504 aa13.04□□□□□ -0.32
TARDBP-211ENST00000610369 C5P01031 1676 aa13.04□□□□□ -0.32
TARDBP-211ENST00000610369 KDM6AO15550 1401 aaPredicted RBP13.04□□□□□ -0.32
TARDBP-211ENST00000610369 C4BP0C0L5 1744 aa13.03□□□□□ -0.32
TARDBP-211ENST00000610369 PTCD1O75127 700 aaKnown RBP13.03□□□□□ -0.32
TARDBP-211ENST00000610369 NLGN1Q8N2Q7 840 aa13.03□□□□□ -0.32
TARDBP-211ENST00000610369 NLGN2Q8NFZ4 835 aa13.03□□□□□ -0.32
TARDBP-211ENST00000610369 CFAP53Q96M91 514 aa13.03□□□□□ -0.32
TARDBP-211ENST00000610369 SLC4A9Q96Q91 983 aa13.03□□□□□ -0.32
TARDBP-211ENST00000610369 CNTNAP4Q9C0A0 1308 aa13.03□□□□□ -0.32
TARDBP-211ENST00000610369 COL24A1Q17RW2 1714 aa13.02□□□□□ -0.32
TARDBP-211ENST00000610369 RPS6KA4O75676 772 aa13.02□□□□□ -0.33
TARDBP-211ENST00000610369 PELP1Q8IZL8 1130 aaKnown RBP13.02□□□□□ -0.33
TARDBP-211ENST00000610369 SLC52A2Q9HAB3 445 aa13.02□□□□□ -0.33
TARDBP-211ENST00000610369 U2SURPO15042 1029 aaKnown RBP13.01□□□□□ -0.33
TARDBP-211ENST00000610369 RNMTO43148 476 aaKnown RBP13.01□□□□□ -0.33
TARDBP-211ENST00000610369 RFC4P35249 363 aa13.01□□□□□ -0.33
TARDBP-211ENST00000610369 CNGB1Q14028 1251 aaPredicted RBP13.01□□□□□ -0.33
TARDBP-211ENST00000610369 MTHFSDQ2M296 383 aaKnown RBP13.01□□□□□ -0.33
TARDBP-211ENST00000610369 LGR6Q9HBX8 967 aa13.01□□□□□ -0.33
TARDBP-211ENST00000610369 TAF1LQ8IZX4 1826 aa13□□□□□ -0.33
TARDBP-211ENST00000610369 TUBGCP6Q96RT7 1819 aa13□□□□□ -0.33
TARDBP-211ENST00000610369 SMIM5Q71RC9 77 aa13□□□□□ -0.33
TARDBP-211ENST00000610369 ARHGEF1Q92888 912 aaKnown RBP13□□□□□ -0.33
TARDBP-211ENST00000610369 NUDCQ9Y266 331 aa13□□□□□ -0.33
TARDBP-211ENST00000610369 CRKLP46109 303 aaKnown RBP12.99□□□□□ -0.33
TARDBP-211ENST00000610369 ZNF784Q8NCA9 323 aaPredicted RBP12.99□□□□□ -0.33
TARDBP-211ENST00000610369 GAS2L2Q8NHY3 880 aa12.99□□□□□ -0.33
TARDBP-211ENST00000610369 GOLGB1Q14789 3259 aaKnown RBP12.98□□□□□ -0.33
TARDBP-211ENST00000610369 MMP10P09238 476 aa12.98□□□□□ -0.33
TARDBP-211ENST00000610369 ZNF831Q5JPB2 1677 aa12.97□□□□□ -0.33
TARDBP-211ENST00000610369 GNAT3A8MTJ3 354 aa12.97□□□□□ -0.33
TARDBP-211ENST00000610369 YBX3P16989 372 aaKnown RBP eCLIP12.97□□□□□ -0.338e-13■□□□□ 8.1
TARDBP-211ENST00000610369 VSIG10Q8N0Z9 540 aa12.97□□□□□ -0.33
TARDBP-211ENST00000610369 UBR3Q6ZT12 1888 aa12.96□□□□□ -0.33
TARDBP-211ENST00000610369 GYS1P13807 737 aa12.96□□□□□ -0.33
TARDBP-211ENST00000610369 FCHSD2O94868 740 aa12.95□□□□□ -0.34
TARDBP-211ENST00000610369 PPP2R1AP30153 589 aa12.95□□□□□ -0.34
TARDBP-211ENST00000610369 TGFB2P61812 414 aa12.95□□□□□ -0.34
TARDBP-211ENST00000610369 TEFQ10587 303 aa12.95□□□□□ -0.34
TARDBP-211ENST00000610369 SLC39A6Q13433 755 aa12.95□□□□□ -0.34
TARDBP-211ENST00000610369 INTS5Q6P9B9 1019 aaKnown RBP12.95□□□□□ -0.34
TARDBP-211ENST00000610369 TTC5Q8N0Z6 440 aa12.95□□□□□ -0.34
TARDBP-211ENST00000610369 CCDC87Q9NVE4 849 aa12.95□□□□□ -0.34
TARDBP-211ENST00000610369 PARP3Q9Y6F1 533 aa12.95□□□□□ -0.34
TARDBP-211ENST00000610369 COL3A1P02461 1466 aaPredicted RBP12.94□□□□□ -0.34
TARDBP-211ENST00000610369 CYP19A1P11511 503 aaPredicted RBP12.94□□□□□ -0.34
TARDBP-211ENST00000610369 DNAJC10Q8IXB1 793 aa12.94□□□□□ -0.34
TARDBP-211ENST00000610369 IL17REQ8NFR9 667 aa12.94□□□□□ -0.34
TARDBP-211ENST00000610369 TEX13AQ9BXU3 409 aaPredicted RBP12.94□□□□□ -0.34
TARDBP-211ENST00000610369 ZPR1O75312 459 aa12.93□□□□□ -0.34
TARDBP-211ENST00000610369 STARD3NLO95772 234 aa12.93□□□□□ -0.34
TARDBP-211ENST00000610369 U2AF1L5P0DN76 240 aaPredicted RBP12.93□□□□□ -0.34
TARDBP-211ENST00000610369 PRKAR2BP31323 418 aa12.93□□□□□ -0.34
TARDBP-211ENST00000610369 U2AF1Q01081 240 aaKnown RBP eCLIP12.93□□□□□ -0.343e-7■■■□□ 15.3
TARDBP-211ENST00000610369 RSPH6AQ9H0K4 717 aa12.93□□□□□ -0.34
TARDBP-211ENST00000610369 USP42Q9H9J4 1324 aaKnown RBP12.92□□□□□ -0.34
TARDBP-211ENST00000610369 MRC1P22897 1456 aa12.92□□□□□ -0.34
TARDBP-211ENST00000610369 ZNF790Q6PG37 636 aa12.92□□□□□ -0.34
TARDBP-211ENST00000610369 RTF1Q92541 710 aaKnown RBP12.91□□□□□ -0.34
TARDBP-211ENST00000610369 PHACTR3Q96KR7 559 aa12.91□□□□□ -0.34
TARDBP-211ENST00000610369 SCN11AQ9UI33 1791 aa12.91□□□□□ -0.34
TARDBP-211ENST00000610369 SOS1Q07889 1333 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-211ENST00000610369 HTATSF1O43719 755 aaKnown RBP12.9□□□□□ -0.34
TARDBP-211ENST00000610369 NEFMP07197 916 aa12.9□□□□□ -0.34
TARDBP-211ENST00000610369 FKBP8Q14318 412 aa12.9□□□□□ -0.34
TARDBP-211ENST00000610369 SRP68Q9UHB9 627 aaKnown RBP12.9□□□□□ -0.34
TARDBP-211ENST00000610369 NARFQ9UHQ1 456 aa12.9□□□□□ -0.34
TARDBP-211ENST00000610369 A0A087WZG4 1122 aa12.89□□□□□ -0.35
TARDBP-211ENST00000610369 TM4SF1P30408 202 aa12.89□□□□□ -0.35
TARDBP-211ENST00000610369 ZNF496Q96IT1 587 aaPredicted RBP12.89□□□□□ -0.35
TARDBP-211ENST00000610369 FMNL2Q96PY5 1086 aa12.89□□□□□ -0.35
TARDBP-211ENST00000610369 CHD4Q14839 1912 aa12.89□□□□□ -0.35
TARDBP-211ENST00000610369 CEMIPQ8WUJ3 1361 aa12.89□□□□□ -0.35
TARDBP-211ENST00000610369 COL5A3P25940 1745 aaPredicted RBP12.88□□□□□ -0.35
TARDBP-211ENST00000610369 A0A0G2JLW4 131 aa12.88□□□□□ -0.35
TARDBP-211ENST00000610369 BTBD11A6QL63 1104 aa12.88□□□□□ -0.35
TARDBP-211ENST00000610369 USPL1Q5W0Q7 1092 aa12.88□□□□□ -0.35
TARDBP-211ENST00000610369 NPM2Q86SE8 214 aaKnown RBP12.88□□□□□ -0.35
TARDBP-211ENST00000610369 PNNQ9H307 717 aaKnown RBP12.88□□□□□ -0.35
TARDBP-211ENST00000610369 ZBTB1Q9Y2K1 713 aa12.88□□□□□ -0.35
TARDBP-211ENST00000610369 CICQ96RK0 1608 aaPredicted RBP12.88□□□□□ -0.35
TARDBP-211ENST00000610369 ADAMTS7Q9UKP4 1686 aa12.87□□□□□ -0.35
TARDBP-211ENST00000610369 HEG1Q9ULI3 1381 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms