RNA–Protein interactions for RNA: ENST00000610160.1

COMMD7-204, Transcript of COMM domain containing 7, humanhuman

TSL 2

Gene COMMD7, Length 1,987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD7-204ENST00000610160 IL2RBP14784 551 aa28.95■■■□□ 2.23
COMMD7-204ENST00000610160 MRC1P22897 1456 aa28.95■■■□□ 2.23
COMMD7-204ENST00000610160 PCDH11XQ9BZA7 1347 aa28.93■■■□□ 2.22
COMMD7-204ENST00000610160 PCDH11YQ9BZA8 1340 aa28.93■■■□□ 2.22
COMMD7-204ENST00000610160 TMEM57Q8N5G2 664 aa28.93■■■□□ 2.22
COMMD7-204ENST00000610160 HSP90AB1P08238 724 aaKnown RBP28.92■■■□□ 2.22
COMMD7-204ENST00000610160 EIF4A1P60842 406 aaKnown RBP28.92■■■□□ 2.22
COMMD7-204ENST00000610160 DCAF5Q96JK2 942 aa28.92■■■□□ 2.22
COMMD7-204ENST00000610160 DDX19BQ9UMR2 479 aa28.92■■■□□ 2.22
COMMD7-204ENST00000610160 NRAPQ86VF7 1730 aa28.92■■■□□ 2.22
COMMD7-204ENST00000610160 ITPRIPQ8IWB1 547 aa28.92■■■□□ 2.22
COMMD7-204ENST00000610160 ZCRB1Q8TBF4 217 aaKnown RBP28.92■■■□□ 2.22
COMMD7-204ENST00000610160 API5Q9BZZ5 524 aaKnown RBP28.92■■■□□ 2.22
COMMD7-204ENST00000610160 ABCC4O15439 1325 aa28.91■■■□□ 2.22
COMMD7-204ENST00000610160 KDM2BQ8NHM5 1336 aa28.91■■■□□ 2.22
COMMD7-204ENST00000610160 CACNA1FO60840 1977 aa28.91■■■□□ 2.22
COMMD7-204ENST00000610160 CERKQ8TCT0 537 aa28.9■■■□□ 2.22
COMMD7-204ENST00000610160 SLC52A2Q9HAB3 445 aa28.9■■■□□ 2.22
COMMD7-204ENST00000610160 KCNQ3O43525 872 aa28.88■■■□□ 2.21
COMMD7-204ENST00000610160 ADAMTS2O95450 1211 aa28.88■■■□□ 2.21
COMMD7-204ENST00000610160 HOXB7P09629 217 aa28.88■■■□□ 2.21
COMMD7-204ENST00000610160 CCDC30Q5VVM6 783 aa28.88■■■□□ 2.21
COMMD7-204ENST00000610160 RGS12O14924 1447 aa28.88■■■□□ 2.21
COMMD7-204ENST00000610160 PTPRCP08575 1304 aa28.88■■■□□ 2.21
COMMD7-204ENST00000610160 WNK3Q9BYP7 1800 aa28.88■■■□□ 2.21
COMMD7-204ENST00000610160 SLC4A2P04920 1241 aa28.88■■■□□ 2.21
COMMD7-204ENST00000610160 STK31Q9BXU1 1019 aa28.88■■■□□ 2.21
COMMD7-204ENST00000610160 CENPQQ7L2Z9 268 aaPredicted RBP28.87■■■□□ 2.21
COMMD7-204ENST00000610160 USP35Q9P2H5 1018 aa28.87■■■□□ 2.21
COMMD7-204ENST00000610160 NWD2Q9ULI1 1742 aa28.86■■■□□ 2.21
COMMD7-204ENST00000610160 DISP2A7MBM2 1401 aa28.86■■■□□ 2.21
COMMD7-204ENST00000610160 HEG1Q9ULI3 1381 aa28.84■■■□□ 2.21
COMMD7-204ENST00000610160 NUTM2BA6NNL0 878 aaPredicted RBP28.84■■■□□ 2.21
COMMD7-204ENST00000610160 NUTM2EB1AL46 878 aaPredicted RBP28.84■■■□□ 2.21
COMMD7-204ENST00000610160 HDGFL1Q5TGJ6 251 aa28.84■■■□□ 2.21
COMMD7-204ENST00000610160 NUTM2AQ8IVF1 878 aaPredicted RBP28.84■■■□□ 2.21
COMMD7-204ENST00000610160 JCADQ9P266 1359 aa28.84■■■□□ 2.21
COMMD7-204ENST00000610160 NFATC2IPQ8NCF5 419 aa28.82■■■□□ 2.2
COMMD7-204ENST00000610160 CHMP4AQ9BY43 222 aa28.81■■■□□ 2.2
COMMD7-204ENST00000610160 NKX1-1Q15270 411 aaPredicted RBP28.81■■■□□ 2.2
COMMD7-204ENST00000610160 NECTIN2Q92692 538 aa28.81■■■□□ 2.2
COMMD7-204ENST00000610160 PCDHB15Q9Y5E8 787 aa28.81■■■□□ 2.2
COMMD7-204ENST00000610160 ZNF790Q6PG37 636 aa28.8■■■□□ 2.2
COMMD7-204ENST00000610160 G2E3Q7L622 706 aa28.8■■■□□ 2.2
COMMD7-204ENST00000610160 SLIT2O94813 1529 aa28.8■■■□□ 2.2
COMMD7-204ENST00000610160 ZBTB40Q9NUA8 1239 aa28.79■■■□□ 2.2
COMMD7-204ENST00000610160 CHMP4BQ9H444 224 aaKnown RBP28.78■■■□□ 2.2
COMMD7-204ENST00000610160 GIGYF1O75420 1035 aaPredicted RBP28.77■■■□□ 2.2
COMMD7-204ENST00000610160 CABP4P57796 275 aa28.77■■■□□ 2.2
COMMD7-204ENST00000610160 DDX54Q8TDD1 881 aaKnown RBP28.77■■■□□ 2.2
COMMD7-204ENST00000610160 TOGARAM1Q9Y4F4 1720 aa28.77■■■□□ 2.2
COMMD7-204ENST00000610160 C5P01031 1676 aa28.77■■■□□ 2.2
COMMD7-204ENST00000610160 IGHDP01880 384 aa28.77■■■□□ 2.2
COMMD7-204ENST00000610160 INTS3Q68E01 1043 aaKnown RBP28.77■■■□□ 2.2
COMMD7-204ENST00000610160 FLIIQ13045 1269 aa28.76■■■□□ 2.19
COMMD7-204ENST00000610160 SLC39A6Q13433 755 aa28.76■■■□□ 2.19
COMMD7-204ENST00000610160 EIF2S2P20042 333 aaKnown RBP28.75■■■□□ 2.19
COMMD7-204ENST00000610160 ERVV-2B6SEH9 535 aa28.75■■■□□ 2.19
COMMD7-204ENST00000610160 ZBTB7BO15156 539 aaPredicted RBP28.75■■■□□ 2.19
COMMD7-204ENST00000610160 PAPPAQ13219 1627 aa28.74■■■□□ 2.19
COMMD7-204ENST00000610160 SPATA31A1Q5TZJ5 1347 aa28.74■■■□□ 2.19
COMMD7-204ENST00000610160 N4BP2Q86UW6 1770 aaPredicted RBP28.74■■■□□ 2.19
COMMD7-204ENST00000610160 TTC5Q8N0Z6 440 aa28.72■■■□□ 2.19
COMMD7-204ENST00000610160 CHPF2Q9P2E5 772 aa28.71■■■□□ 2.19
COMMD7-204ENST00000610160 UBR2Q8IWV8 1755 aa28.71■■■□□ 2.19
COMMD7-204ENST00000610160 TNS2Q63HR2 1409 aa28.71■■■□□ 2.19
COMMD7-204ENST00000610160 GLI3P10071 1580 aa28.71■■■□□ 2.19
COMMD7-204ENST00000610160 FKBP5Q13451 457 aaPredicted RBP28.71■■■□□ 2.19
COMMD7-204ENST00000610160 THRAP3Q9Y2W1 955 aaKnown RBP28.71■■■□□ 2.19
COMMD7-204ENST00000610160 RWDD1Q9H446 243 aaPredicted RBP28.7■■■□□ 2.19
COMMD7-204ENST00000610160 SPATA31A6Q5VVP1 1343 aa28.7■■■□□ 2.18
COMMD7-204ENST00000610160 CDCA7Q9BWT1 371 aaPredicted RBP28.7■■■□□ 2.18
COMMD7-204ENST00000610160 PXDNLA1KZ92 1463 aa28.69■■■□□ 2.18
COMMD7-204ENST00000610160 PRAMEF22A3QJZ6 481 aa28.69■■■□□ 2.18
COMMD7-204ENST00000610160 ZNF496Q96IT1 587 aaPredicted RBP28.69■■■□□ 2.18
COMMD7-204ENST00000610160 LRP6O75581 1613 aa28.68■■■□□ 2.18
COMMD7-204ENST00000610160 F6X3S4 739 aa28.68■■■□□ 2.18
COMMD7-204ENST00000610160 TSHZ2Q9NRE2 1034 aa28.68■■■□□ 2.18
COMMD7-204ENST00000610160 DBF4Q9UBU7 674 aaPredicted RBP28.68■■■□□ 2.18
COMMD7-204ENST00000610160 SPATA31A5Q5VU36 1347 aa28.68■■■□□ 2.18
COMMD7-204ENST00000610160 SPATA31A7Q8IWB4 1347 aa28.68■■■□□ 2.18
COMMD7-204ENST00000610160 LAMB4A4D0S4 1761 aa28.68■■■□□ 2.18
COMMD7-204ENST00000610160 FMNL2Q96PY5 1086 aa28.67■■■□□ 2.18
COMMD7-204ENST00000610160 PHAXQ9H814 394 aaKnown RBP28.67■■■□□ 2.18
COMMD7-204ENST00000610160 CCT4P50991 539 aaKnown RBP28.66■■■□□ 2.18
COMMD7-204ENST00000610160 HDAC1Q13547 482 aaPredicted RBP28.66■■■□□ 2.18
COMMD7-204ENST00000610160 EXOC5O00471 708 aa28.65■■■□□ 2.18
COMMD7-204ENST00000610160 ITGB4P16144 1822 aa28.64■■■□□ 2.18
COMMD7-204ENST00000610160 SLC4A10Q6U841 1118 aa28.64■■■□□ 2.18
COMMD7-204ENST00000610160 C8orf37Q96NL8 207 aa28.64■■■□□ 2.18
COMMD7-204ENST00000610160 KCPQ6ZWJ8 1503 aa28.64■■■□□ 2.18
COMMD7-204ENST00000610160 UNC5CLQ8IV45 518 aa28.64■■■□□ 2.17
COMMD7-204ENST00000610160 SNRPA1P09661 255 aaKnown RBP28.63■■■□□ 2.17
COMMD7-204ENST00000610160 BCL9LQ86UU0 1499 aa28.63■■■□□ 2.17
COMMD7-204ENST00000610160 SKAP1Q86WV1 359 aa28.62■■■□□ 2.17
COMMD7-204ENST00000610160 ANXA1P04083 346 aa28.62■■■□□ 2.17
COMMD7-204ENST00000610160 NGLY1Q96IV0 654 aa28.62■■■□□ 2.17
COMMD7-204ENST00000610160 BARGINQ6ZT62 677 aa28.61■■■□□ 2.17
COMMD7-204ENST00000610160 C1orf115Q9H7X2 142 aa28.61■■■□□ 2.17
COMMD7-204ENST00000610160 TMOD3Q9NYL9 352 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms