RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.84■■□□□ 1.09
SGMS1-209ENST00000609445 ATP6V1AP38606 617 aa21.84■■□□□ 1.09
SGMS1-209ENST00000609445 IL13P35225 146 aa21.83■■□□□ 1.09
SGMS1-209ENST00000609445 SULT6B1Q6IMI4 303 aa21.83■■□□□ 1.09
SGMS1-209ENST00000609445 ERVV-2B6SEH9 535 aa21.82■■□□□ 1.08
SGMS1-209ENST00000609445 DCAF5Q96JK2 942 aa21.82■■□□□ 1.08
SGMS1-209ENST00000609445 HSP90AB1P08238 724 aaKnown RBP21.81■■□□□ 1.08
SGMS1-209ENST00000609445 AMOTQ4VCS5 1084 aa21.81■■□□□ 1.08
SGMS1-209ENST00000609445 ZNF784Q8NCA9 323 aaPredicted RBP21.81■■□□□ 1.08
SGMS1-209ENST00000609445 KDRP35968 1356 aa21.81■■□□□ 1.08
SGMS1-209ENST00000609445 GNPATO15228 680 aa21.8■■□□□ 1.08
SGMS1-209ENST00000609445 SLC4A9Q96Q91 983 aa21.8■■□□□ 1.08
SGMS1-209ENST00000609445 RBM42Q9BTD8 480 aaKnown RBP21.8■■□□□ 1.08
SGMS1-209ENST00000609445 PER1O15534 1290 aaPredicted RBP21.79■■□□□ 1.08
SGMS1-209ENST00000609445 SSFA2P28290 1259 aa21.79■■□□□ 1.08
SGMS1-209ENST00000609445 GOLGB1Q14789 3259 aaKnown RBP21.79■■□□□ 1.08
SGMS1-209ENST00000609445 YBX3P16989 372 aaKnown RBP eCLIP21.78■■□□□ 1.08
SGMS1-209ENST00000609445 MTHFSP49914 203 aa21.78■■□□□ 1.08
SGMS1-209ENST00000609445 CABP4P57796 275 aa21.78■■□□□ 1.08
SGMS1-209ENST00000609445 C1orf141Q5JVX7 400 aa21.78■■□□□ 1.08
SGMS1-209ENST00000609445 ZNF831Q5JPB2 1677 aa21.77■■□□□ 1.08
SGMS1-209ENST00000609445 CC2D1BQ5T0F9 858 aaKnown RBP21.77■■□□□ 1.08
SGMS1-209ENST00000609445 COL5A3P25940 1745 aaPredicted RBP21.77■■□□□ 1.08
SGMS1-209ENST00000609445 SCN11AQ9UI33 1791 aa21.76■■□□□ 1.07
SGMS1-209ENST00000609445 CNGB1Q14028 1251 aaPredicted RBP21.75■■□□□ 1.07
SGMS1-209ENST00000609445 CD2APQ9Y5K6 639 aa21.75■■□□□ 1.07
SGMS1-209ENST00000609445 MYH14Q7Z406 1995 aaKnown RBP21.74■■□□□ 1.07
SGMS1-209ENST00000609445 HMOX1P09601 288 aa21.73■■□□□ 1.07
SGMS1-209ENST00000609445 NFATC2IPQ8NCF5 419 aa21.73■■□□□ 1.07
SGMS1-209ENST00000609445 VIRMAQ69YN4 1812 aaKnown RBP21.73■■□□□ 1.07
SGMS1-209ENST00000609445 PTCD1O75127 700 aaKnown RBP21.72■■□□□ 1.07
SGMS1-209ENST00000609445 RTCBQ9Y3I0 505 aaKnown RBP21.71■■□□□ 1.07
SGMS1-209ENST00000609445 TJP1Q07157 1748 aa21.7■■□□□ 1.06
SGMS1-209ENST00000609445 RC3H1Q5TC82 1133 aaKnown RBP21.7■■□□□ 1.06
SGMS1-209ENST00000609445 WWC3Q9ULE0 1092 aa21.7■■□□□ 1.06
SGMS1-209ENST00000609445 GRIN3BO60391 1043 aa21.69■■□□□ 1.06
SGMS1-209ENST00000609445 AKAP4Q5JQC9 854 aa21.69■■□□□ 1.06
SGMS1-209ENST00000609445 TRAPPC3LQ5T215 181 aa21.69■■□□□ 1.06
SGMS1-209ENST00000609445 CNTNAP4Q9C0A0 1308 aa21.69■■□□□ 1.06
SGMS1-209ENST00000609445 DIAPH1O60610 1272 aaKnown RBP21.68■■□□□ 1.06
SGMS1-209ENST00000609445 MMP10P09238 476 aa21.68■■□□□ 1.06
SGMS1-209ENST00000609445 LGR6Q9HBX8 967 aa21.68■■□□□ 1.06
SGMS1-209ENST00000609445 C4AP0C0L4 1744 aa21.68■■□□□ 1.06
SGMS1-209ENST00000609445 COL3A1P02461 1466 aaPredicted RBP21.67■■□□□ 1.06
SGMS1-209ENST00000609445 ARHGEF1Q92888 912 aaKnown RBP21.67■■□□□ 1.06
SGMS1-209ENST00000609445 NPC1L1Q9UHC9 1359 aa21.66■■□□□ 1.06
SGMS1-209ENST00000609445 RPS6KA4O75676 772 aa21.66■■□□□ 1.06
SGMS1-209ENST00000609445 RNMTO43148 476 aaKnown RBP21.65■■□□□ 1.06
SGMS1-209ENST00000609445 CRKLP46109 303 aaKnown RBP21.65■■□□□ 1.06
SGMS1-209ENST00000609445 MTHFSDQ2M296 383 aaKnown RBP21.65■■□□□ 1.06
SGMS1-209ENST00000609445 CICQ96RK0 1608 aaPredicted RBP21.65■■□□□ 1.06
SGMS1-209ENST00000609445 GYS1P13807 737 aa21.64■■□□□ 1.05
SGMS1-209ENST00000609445 ADRA2BP18089 450 aa21.64■■□□□ 1.05
SGMS1-209ENST00000609445 SLC52A2Q9HAB3 445 aa21.64■■□□□ 1.05
SGMS1-209ENST00000609445 KIF13BQ9NQT8 1826 aa21.64■■□□□ 1.05
SGMS1-209ENST00000609445 MRC1P22897 1456 aa21.64■■□□□ 1.05
SGMS1-209ENST00000609445 ADAMTS7Q9UKP4 1686 aa21.63■■□□□ 1.05
SGMS1-209ENST00000609445 RFC4P35249 363 aa21.63■■□□□ 1.05
SGMS1-209ENST00000609445 KIAA1551Q9HCM1 1747 aa21.63■■□□□ 1.05
SGMS1-209ENST00000609445 N4BP2Q86UW6 1770 aaPredicted RBP21.62■■□□□ 1.05
SGMS1-209ENST00000609445 SLC39A6Q13433 755 aa21.62■■□□□ 1.05
SGMS1-209ENST00000609445 NLGN1Q8N2Q7 840 aa21.62■■□□□ 1.05
SGMS1-209ENST00000609445 U2SURPO15042 1029 aaKnown RBP21.61■■□□□ 1.05
SGMS1-209ENST00000609445 DNAJC10Q8IXB1 793 aa21.61■■□□□ 1.05
SGMS1-209ENST00000609445 SRP68Q9UHB9 627 aaKnown RBP21.61■■□□□ 1.05
SGMS1-209ENST00000609445 KCPQ6ZWJ8 1503 aa21.6■■□□□ 1.05
SGMS1-209ENST00000609445 PXDNLA1KZ92 1463 aa21.59■■□□□ 1.05
SGMS1-209ENST00000609445 INTS5Q6P9B9 1019 aaKnown RBP21.59■■□□□ 1.05
SGMS1-209ENST00000609445 C10orf71Q711Q0 1435 aa21.58■■□□□ 1.05
SGMS1-209ENST00000609445 USP42Q9H9J4 1324 aaKnown RBP21.56■■□□□ 1.04
SGMS1-209ENST00000609445 ATP10DQ9P241 1426 aa21.56■■□□□ 1.04
SGMS1-209ENST00000609445 A0A0G2JLW4 131 aa21.56■■□□□ 1.04
SGMS1-209ENST00000609445 C1QTNF8P60827 252 aa21.56■■□□□ 1.04
SGMS1-209ENST00000609445 FKBP8Q14318 412 aa21.56■■□□□ 1.04
SGMS1-209ENST00000609445 CCDC87Q9NVE4 849 aa21.56■■□□□ 1.04
SGMS1-209ENST00000609445 PARP3Q9Y6F1 533 aa21.56■■□□□ 1.04
SGMS1-209ENST00000609445 UBR2Q8IWV8 1755 aa21.56■■□□□ 1.04
SGMS1-209ENST00000609445 GIGYF1O75420 1035 aaPredicted RBP21.55■■□□□ 1.04
SGMS1-209ENST00000609445 CYP19A1P11511 503 aaPredicted RBP21.54■■□□□ 1.04
SGMS1-209ENST00000609445 TGFB2P61812 414 aa21.53■■□□□ 1.04
SGMS1-209ENST00000609445 DDR1Q08345 913 aa21.53■■□□□ 1.04
SGMS1-209ENST00000609445 SIPA1L3O60292 1781 aaPredicted RBP21.53■■□□□ 1.04
SGMS1-209ENST00000609445 SOS1Q07889 1333 aaPredicted RBP21.53■■□□□ 1.04
SGMS1-209ENST00000609445 ADCY9O60503 1353 aa21.52■■□□□ 1.04
SGMS1-209ENST00000609445 BRCA1P38398 1863 aaKnown RBP21.52■■□□□ 1.04
SGMS1-209ENST00000609445 DPEP1P16444 411 aa21.52■■□□□ 1.04
SGMS1-209ENST00000609445 IL17REQ8NFR9 667 aa21.52■■□□□ 1.04
SGMS1-209ENST00000609445 GNAT3A8MTJ3 354 aa21.51■■□□□ 1.03
SGMS1-209ENST00000609445 USPL1Q5W0Q7 1092 aa21.51■■□□□ 1.03
SGMS1-209ENST00000609445 GAS2L2Q8NHY3 880 aa21.51■■□□□ 1.03
SGMS1-209ENST00000609445 BCS1LQ9Y276 419 aa21.51■■□□□ 1.03
SGMS1-209ENST00000609445 ZBTB1Q9Y2K1 713 aa21.51■■□□□ 1.03
SGMS1-209ENST00000609445 PHACTR3Q96KR7 559 aa21.5■■□□□ 1.03
SGMS1-209ENST00000609445 CFAP53Q96M91 514 aa21.5■■□□□ 1.03
SGMS1-209ENST00000609445 ZPR1O75312 459 aa21.49■■□□□ 1.03
SGMS1-209ENST00000609445 PPP2R1AP30153 589 aa21.49■■□□□ 1.03
SGMS1-209ENST00000609445 PRKAR2BP31323 418 aa21.49■■□□□ 1.03
SGMS1-209ENST00000609445 TEFQ10587 303 aa21.49■■□□□ 1.03
SGMS1-209ENST00000609445 ZNF526Q8TF50 670 aaPredicted RBP21.49■■□□□ 1.03
SGMS1-209ENST00000609445 COL15A1P39059 1388 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms