RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 UBE4AQ14139 1066 aa15.23■□□□□ 0.03
USP6NL-205ENST00000609104 FANCD2Q9BXW9 1451 aa15.23■□□□□ 0.03
USP6NL-205ENST00000609104 SMARCA4P51532 1647 aa15.23■□□□□ 0.03
USP6NL-205ENST00000609104 MINDY4BA8MYZ0 360 aa15.23■□□□□ 0.03
USP6NL-205ENST00000609104 CETN2P41208 172 aa15.23■□□□□ 0.03
USP6NL-205ENST00000609104 RRS1Q15050 365 aaKnown RBP15.23■□□□□ 0.03
USP6NL-205ENST00000609104 CLIP2Q9UDT6 1046 aa15.23■□□□□ 0.03
USP6NL-205ENST00000609104 PPP1R12BO60237 982 aaPredicted RBP15.22■□□□□ 0.03
USP6NL-205ENST00000609104 AIDAQ96BJ3 306 aa15.22■□□□□ 0.03
USP6NL-205ENST00000609104 SPG7Q9UQ90 795 aa15.22■□□□□ 0.03
USP6NL-205ENST00000609104 GSTTP1A0A1W2PQM5 241 aa15.22■□□□□ 0.03
USP6NL-205ENST00000609104 XPCQ01831 940 aaPredicted RBP15.22■□□□□ 0.03
USP6NL-205ENST00000609104 LUZP1Q86V48 1076 aa15.22■□□□□ 0.03
USP6NL-205ENST00000609104 CTNNBL1Q8WYA6 563 aaPredicted RBP15.22■□□□□ 0.03
USP6NL-205ENST00000609104 SEC63Q9UGP8 760 aaKnown RBP15.22■□□□□ 0.03
USP6NL-205ENST00000609104 KIF2AO00139 706 aaPredicted RBP15.22■□□□□ 0.03
USP6NL-205ENST00000609104 TNNT1P13805 278 aa15.22■□□□□ 0.03
USP6NL-205ENST00000609104 NUP88Q99567 741 aaPredicted RBP15.22■□□□□ 0.03
USP6NL-205ENST00000609104 TSG101Q99816 390 aa15.22■□□□□ 0.03
USP6NL-205ENST00000609104 U3KPZ7 1027 aaPredicted RBP15.21■□□□□ 0.03
USP6NL-205ENST00000609104 CGNQ9P2M7 1197 aaKnown RBP15.21■□□□□ 0.03
USP6NL-205ENST00000609104 MIS18AQ9NYP9 233 aa15.21■□□□□ 0.03
USP6NL-205ENST00000609104 GPATCH11Q8N954 259 aa15.21■□□□□ 0.03
USP6NL-205ENST00000609104 UBA5Q9GZZ9 404 aa15.21■□□□□ 0.03
USP6NL-205ENST00000609104 BOLA2Q9H3K6 86 aa15.21■□□□□ 0.03
USP6NL-205ENST00000609104 CPLX3Q8WVH0 158 aa15.2■□□□□ 0.02
USP6NL-205ENST00000609104 C16orf45Q96MC5 204 aaPredicted RBP15.2■□□□□ 0.02
USP6NL-205ENST00000609104 PDIA4P13667 645 aaKnown RBP15.2■□□□□ 0.02
USP6NL-205ENST00000609104 CEP63Q96MT8 703 aa15.2■□□□□ 0.02
USP6NL-205ENST00000609104 TRIM21P19474 475 aaKnown RBP15.2■□□□□ 0.02
USP6NL-205ENST00000609104 GAPVD1Q14C86 1478 aa15.2■□□□□ 0.02
USP6NL-205ENST00000609104 GCOM1H8Y6P7 765 aaPredicted RBP15.19■□□□□ 0.02
USP6NL-205ENST00000609104 MYZAPP0CAP1 466 aa15.19■□□□□ 0.02
USP6NL-205ENST00000609104 STAMBPO95630 424 aa15.19■□□□□ 0.02
USP6NL-205ENST00000609104 C8orf76Q96K31 380 aa15.19■□□□□ 0.02
USP6NL-205ENST00000609104 METTL24Q5JXM2 366 aa15.19■□□□□ 0.02
USP6NL-205ENST00000609104 CCDC82Q8N4S0 544 aa15.19■□□□□ 0.02
USP6NL-205ENST00000609104 LARP6Q9BRS8 491 aaKnown RBP15.19■□□□□ 0.02
USP6NL-205ENST00000609104 PRPF40BQ6NWY9 871 aaKnown RBP15.19■□□□□ 0.02
USP6NL-205ENST00000609104 MKNK2Q9HBH9 465 aa15.19■□□□□ 0.02
USP6NL-205ENST00000609104 SPDYE4A6NLX3 237 aa15.19■□□□□ 0.02
USP6NL-205ENST00000609104 PAFAH1B1P43034 410 aa15.19■□□□□ 0.02
USP6NL-205ENST00000609104 ERBINQ96RT1 1412 aa15.19■□□□□ 0.02
USP6NL-205ENST00000609104 CKAP2LQ8IYA6 745 aa15.19■□□□□ 0.02
USP6NL-205ENST00000609104 KIF21BO75037 1637 aa15.18■□□□□ 0.02
USP6NL-205ENST00000609104 NCOA2Q15596 1464 aa15.18■□□□□ 0.02
USP6NL-205ENST00000609104 BICDL1Q6ZP65 573 aa15.18■□□□□ 0.02
USP6NL-205ENST00000609104 KIF1BPQ96EK5 621 aa15.18■□□□□ 0.02
USP6NL-205ENST00000609104 IGHMBP2P38935 993 aaKnown RBP15.18■□□□□ 0.02
USP6NL-205ENST00000609104 CNNM3Q8NE01 707 aa15.18■□□□□ 0.02
USP6NL-205ENST00000609104 SPECC1Q5M775 1068 aa15.18■□□□□ 0.02
USP6NL-205ENST00000609104 ZNF692Q9BU19 519 aaPredicted RBP15.18■□□□□ 0.02
USP6NL-205ENST00000609104 CALCOCO1Q9P1Z2 691 aa15.18■□□□□ 0.02
USP6NL-205ENST00000609104 LARP1Q6PKG0 1096 aaKnown RBP15.18■□□□□ 0.02
USP6NL-205ENST00000609104 NUTM2BA6NNL0 878 aaPredicted RBP15.18■□□□□ 0.02
USP6NL-205ENST00000609104 NUTM2EB1AL46 878 aaPredicted RBP15.18■□□□□ 0.02
USP6NL-205ENST00000609104 PPP4R3BQ5MIZ7 849 aa15.18■□□□□ 0.02
USP6NL-205ENST00000609104 MICALCLQ6ZW33 695 aa15.18■□□□□ 0.02
USP6NL-205ENST00000609104 NUTM2AQ8IVF1 878 aaPredicted RBP15.18■□□□□ 0.02
USP6NL-205ENST00000609104 ISM2Q6H9L7 571 aa15.17■□□□□ 0.02
USP6NL-205ENST00000609104 USO1O60763 962 aaKnown RBP15.17■□□□□ 0.02
USP6NL-205ENST00000609104 FGFR1OPO95684 399 aaKnown RBP15.17■□□□□ 0.02
USP6NL-205ENST00000609104 HLTFQ14527 1009 aaKnown RBP eCLIP15.17■□□□□ 0.02
USP6NL-205ENST00000609104 CHMP4BP1P59074 171 aa15.17■□□□□ 0.02
USP6NL-205ENST00000609104 TNIP1Q15025 636 aa15.17■□□□□ 0.02
USP6NL-205ENST00000609104 WDR97A6NE52 1622 aa15.17■□□□□ 0.02
USP6NL-205ENST00000609104 PRKCSHP14314 528 aaPredicted RBP15.17■□□□□ 0.02
USP6NL-205ENST00000609104 MACROD2A1Z1Q3 448 aa15.17■□□□□ 0.02
USP6NL-205ENST00000609104 DCAF8L1A6NGE4 600 aa15.17■□□□□ 0.02
USP6NL-205ENST00000609104 POLR3DP05423 398 aaPredicted RBP15.17■□□□□ 0.02
USP6NL-205ENST00000609104 CTR9Q6PD62 1173 aa15.17■□□□□ 0.02
USP6NL-205ENST00000609104 RAB11FIP3O75154 756 aa15.17■□□□□ 0.02
USP6NL-205ENST00000609104 CCDC184Q52MB2 194 aa15.17■□□□□ 0.02
USP6NL-205ENST00000609104 VPS36Q86VN1 386 aa15.17■□□□□ 0.02
USP6NL-205ENST00000609104 USP25Q9UHP3 1055 aa15.17■□□□□ 0.02
USP6NL-205ENST00000609104 GTF2F1P35269 517 aaKnown RBP eCLIP15.16■□□□□ 0.02
USP6NL-205ENST00000609104 TMPOP42166 694 aaKnown RBP15.16■□□□□ 0.02
USP6NL-205ENST00000609104 CCT2P78371 535 aaKnown RBP15.16■□□□□ 0.02
USP6NL-205ENST00000609104 GNAT3A8MTJ3 354 aa15.16■□□□□ 0.02
USP6NL-205ENST00000609104 TDRD12Q587J7 1177 aaKnown RBP15.16■□□□□ 0.02
USP6NL-205ENST00000609104 RPAP2Q8IXW5 612 aaPredicted RBP15.16■□□□□ 0.02
USP6NL-205ENST00000609104 IPO4Q8TEX9 1081 aaKnown RBP15.16■□□□□ 0.02
USP6NL-205ENST00000609104 RBM25P49756 843 aaKnown RBP15.15■□□□□ 0.02
USP6NL-205ENST00000609104 HOOK3Q86VS8 718 aa15.15■□□□□ 0.02
USP6NL-205ENST00000609104 PROSER2Q86WR7 435 aaPredicted RBP15.15■□□□□ 0.02
USP6NL-205ENST00000609104 ZFP91Q96JP5 570 aaPredicted RBP15.15■□□□□ 0.02
USP6NL-205ENST00000609104 SSFA2P28290 1259 aa15.15■□□□□ 0.02
USP6NL-205ENST00000609104 TMC6Q7Z403 805 aa15.15■□□□□ 0.02
USP6NL-205ENST00000609104 NAPBQ9H115 298 aa15.15■□□□□ 0.02
USP6NL-205ENST00000609104 SUPT6HQ7KZ85 1726 aaKnown RBP15.15■□□□□ 0.02
USP6NL-205ENST00000609104 GLRX3O76003 335 aaKnown RBP15.15■□□□□ 0.02
USP6NL-205ENST00000609104 SSRP1Q08945 709 aaKnown RBP15.15■□□□□ 0.02
USP6NL-205ENST00000609104 SKAP1Q86WV1 359 aa15.15■□□□□ 0.02
USP6NL-205ENST00000609104 GDPD2Q9HCC8 539 aa15.15■□□□□ 0.02
USP6NL-205ENST00000609104 CTAGE5O15320 804 aa15.15■□□□□ 0.02
USP6NL-205ENST00000609104 AEBP2Q6ZN18 517 aaPredicted RBP15.15■□□□□ 0.02
USP6NL-205ENST00000609104 SCAND2PQ9GZW5 306 aaPredicted RBP15.15■□□□□ 0.02
USP6NL-205ENST00000609104 MX1P20591 662 aa15.15■□□□□ 0.02
USP6NL-205ENST00000609104 ZNF287Q9HBT7 754 aa15.14■□□□□ 0.01
USP6NL-205ENST00000609104 ADCY5O95622 1261 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms