RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 U2AF1Q01081 240 aaKnown RBP eCLIP19.43■□□□□ 0.7
HDDC2-204ENST00000608295 AKAP4Q5JQC9 854 aa19.42■□□□□ 0.7
HDDC2-204ENST00000608295 LINC00116Q8NCU8 138 aa19.42■□□□□ 0.7
HDDC2-204ENST00000608295 AK7Q96M32 723 aa19.42■□□□□ 0.7
HDDC2-204ENST00000608295 LGR6Q9HBX8 967 aa19.42■□□□□ 0.7
HDDC2-204ENST00000608295 ERVV-2B6SEH9 535 aa19.41■□□□□ 0.7
HDDC2-204ENST00000608295 ATP6V1AP38606 617 aa19.41■□□□□ 0.7
HDDC2-204ENST00000608295 ITPK1Q13572 414 aa19.41■□□□□ 0.7
HDDC2-204ENST00000608295 MSL1Q68DK7 614 aa19.41■□□□□ 0.7
HDDC2-204ENST00000608295 KLHL34Q8N239 644 aa19.41■□□□□ 0.7
HDDC2-204ENST00000608295 NFATC2IPQ8NCF5 419 aa19.41■□□□□ 0.7
HDDC2-204ENST00000608295 MTFR1LQ9H019 292 aa19.41■□□□□ 0.7
HDDC2-204ENST00000608295 COL5A3P25940 1745 aaPredicted RBP19.41■□□□□ 0.7
HDDC2-204ENST00000608295 PTCD1O75127 700 aaKnown RBP19.4■□□□□ 0.7
HDDC2-204ENST00000608295 PTGER2P43116 358 aa19.4■□□□□ 0.7
HDDC2-204ENST00000608295 AMIGO3Q86WK7 504 aa19.4■□□□□ 0.7
HDDC2-204ENST00000608295 NUDCQ9Y266 331 aa19.4■□□□□ 0.7
HDDC2-204ENST00000608295 MRC1P22897 1456 aa19.4■□□□□ 0.7
HDDC2-204ENST00000608295 TJP1Q07157 1748 aa19.39■□□□□ 0.7
HDDC2-204ENST00000608295 RSPH6AQ9H0K4 717 aa19.39■□□□□ 0.69
HDDC2-204ENST00000608295 MAP3K5Q99683 1374 aa19.39■□□□□ 0.69
HDDC2-204ENST00000608295 ADAMTS7Q9UKP4 1686 aa19.39■□□□□ 0.69
HDDC2-204ENST00000608295 RNMTO43148 476 aaKnown RBP19.38■□□□□ 0.69
HDDC2-204ENST00000608295 ZEB1P37275 1124 aaPredicted RBP19.38■□□□□ 0.69
HDDC2-204ENST00000608295 COL23A1Q86Y22 540 aaPredicted RBP19.38■□□□□ 0.69
HDDC2-204ENST00000608295 PHACTR3Q96KR7 559 aa19.38■□□□□ 0.69
HDDC2-204ENST00000608295 GNPATO15228 680 aa19.37■□□□□ 0.69
HDDC2-204ENST00000608295 SLC39A6Q13433 755 aa19.37■□□□□ 0.69
HDDC2-204ENST00000608295 SLC4A9Q96Q91 983 aa19.37■□□□□ 0.69
HDDC2-204ENST00000608295 SLC52A2Q9HAB3 445 aa19.36■□□□□ 0.69
HDDC2-204ENST00000608295 SIPA1L3O60292 1781 aaPredicted RBP19.35■□□□□ 0.69
HDDC2-204ENST00000608295 GAS2L2Q8NHY3 880 aa19.35■□□□□ 0.69
HDDC2-204ENST00000608295 DLG5Q8TDM6 1919 aa19.35■□□□□ 0.69
HDDC2-204ENST00000608295 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.34■□□□□ 0.69
HDDC2-204ENST00000608295 COL24A1Q17RW2 1714 aa19.34■□□□□ 0.69
HDDC2-204ENST00000608295 MYH14Q7Z406 1995 aaKnown RBP19.33■□□□□ 0.69
HDDC2-204ENST00000608295 ZNF831Q5JPB2 1677 aa19.33■□□□□ 0.69
HDDC2-204ENST00000608295 SGIP1Q9BQI5 828 aa19.33■□□□□ 0.68
HDDC2-204ENST00000608295 FHDC1Q9C0D6 1143 aaPredicted RBP19.33■□□□□ 0.68
HDDC2-204ENST00000608295 C4AP0C0L4 1744 aa19.33■□□□□ 0.68
HDDC2-204ENST00000608295 UBR2Q8IWV8 1755 aa19.32■□□□□ 0.68
HDDC2-204ENST00000608295 KCPQ6ZWJ8 1503 aa19.32■□□□□ 0.68
HDDC2-204ENST00000608295 GNAT3A8MTJ3 354 aa19.32■□□□□ 0.68
HDDC2-204ENST00000608295 ARXQ96QS3 562 aa19.32■□□□□ 0.68
HDDC2-204ENST00000608295 POLD1P28340 1107 aa19.31■□□□□ 0.68
HDDC2-204ENST00000608295 TEFQ10587 303 aa19.31■□□□□ 0.68
HDDC2-204ENST00000608295 DCTN1Q14203 1278 aa19.3■□□□□ 0.68
HDDC2-204ENST00000608295 RALBP1Q15311 655 aa19.3■□□□□ 0.68
HDDC2-204ENST00000608295 MCM10Q7L590 875 aa19.3■□□□□ 0.68
HDDC2-204ENST00000608295 IL17REQ8NFR9 667 aa19.3■□□□□ 0.68
HDDC2-204ENST00000608295 MYBBP1AQ9BQG0 1328 aaKnown RBP19.29■□□□□ 0.68
HDDC2-204ENST00000608295 SLC16A10Q8TF71 515 aa19.29■□□□□ 0.68
HDDC2-204ENST00000608295 CICQ96RK0 1608 aaPredicted RBP19.29■□□□□ 0.68
HDDC2-204ENST00000608295 DNAJC10Q8IXB1 793 aa19.28■□□□□ 0.68
HDDC2-204ENST00000608295 FCHSD2O94868 740 aa19.27■□□□□ 0.68
HDDC2-204ENST00000608295 SSFA2P28290 1259 aa19.27■□□□□ 0.68
HDDC2-204ENST00000608295 CRKLP46109 303 aaKnown RBP19.26■□□□□ 0.67
HDDC2-204ENST00000608295 TTC5Q8N0Z6 440 aa19.26■□□□□ 0.67
HDDC2-204ENST00000608295 FLAD1Q8NFF5 587 aa19.26■□□□□ 0.67
HDDC2-204ENST00000608295 RTF1Q92541 710 aaKnown RBP19.26■□□□□ 0.67
HDDC2-204ENST00000608295 RTCBQ9Y3I0 505 aaKnown RBP19.26■□□□□ 0.67
HDDC2-204ENST00000608295 CNTNAP4Q9C0A0 1308 aa19.25■□□□□ 0.67
HDDC2-204ENST00000608295 NEFMP07197 916 aa19.25■□□□□ 0.67
HDDC2-204ENST00000608295 SYT17Q9BSW7 474 aa19.25■□□□□ 0.67
HDDC2-204ENST00000608295 MAPK8IP3Q9UPT6 1336 aa19.25■□□□□ 0.67
HDDC2-204ENST00000608295 CEMIPQ8WUJ3 1361 aa19.23■□□□□ 0.67
HDDC2-204ENST00000608295 KCNQ3O43525 872 aa19.23■□□□□ 0.67
HDDC2-204ENST00000608295 CCDC146Q8IYE0 955 aa19.23■□□□□ 0.67
HDDC2-204ENST00000608295 PELP1Q8IZL8 1130 aaKnown RBP19.23■□□□□ 0.67
HDDC2-204ENST00000608295 HMGB2P26583 209 aaKnown RBP19.22■□□□□ 0.67
HDDC2-204ENST00000608295 TRAPPC3LQ5T215 181 aa19.22■□□□□ 0.67
HDDC2-204ENST00000608295 NLGN2Q8NFZ4 835 aa19.22■□□□□ 0.67
HDDC2-204ENST00000608295 ZNF496Q96IT1 587 aaPredicted RBP19.22■□□□□ 0.67
HDDC2-204ENST00000608295 THUMPD2Q9BTF0 503 aaKnown RBP19.22■□□□□ 0.67
HDDC2-204ENST00000608295 PRKRIP1Q9H875 184 aaPredicted RBP19.22■□□□□ 0.67
HDDC2-204ENST00000608295 SRP68Q9UHB9 627 aaKnown RBP19.22■□□□□ 0.67
HDDC2-204ENST00000608295 ZNF316A6NFI3 1004 aaPredicted RBP19.21■□□□□ 0.67
HDDC2-204ENST00000608295 BTBD11A6QL63 1104 aa19.21■□□□□ 0.67
HDDC2-204ENST00000608295 ARHGEF1Q92888 912 aaKnown RBP19.21■□□□□ 0.67
HDDC2-204ENST00000608295 WWC3Q9ULE0 1092 aa19.21■□□□□ 0.67
HDDC2-204ENST00000608295 ZNF330Q9Y3S2 320 aaPredicted RBP19.21■□□□□ 0.67
HDDC2-204ENST00000608295 RPS6KA4O75676 772 aa19.2■□□□□ 0.66
HDDC2-204ENST00000608295 RFC4P35249 363 aa19.2■□□□□ 0.66
HDDC2-204ENST00000608295 ZNF790Q6PG37 636 aa19.2■□□□□ 0.66
HDDC2-204ENST00000608295 PLEKHF1Q96S99 279 aa19.2■□□□□ 0.66
HDDC2-204ENST00000608295 CCDC87Q9NVE4 849 aa19.2■□□□□ 0.66
HDDC2-204ENST00000608295 ZBTB1Q9Y2K1 713 aa19.2■□□□□ 0.66
HDDC2-204ENST00000608295 CANXP27824 592 aaKnown RBP19.19■□□□□ 0.66
HDDC2-204ENST00000608295 WDR43Q15061 677 aaKnown RBP eCLIP19.19■□□□□ 0.66
HDDC2-204ENST00000608295 RC3H1Q5TC82 1133 aaKnown RBP19.19■□□□□ 0.66
HDDC2-204ENST00000608295 INTS5Q6P9B9 1019 aaKnown RBP19.19■□□□□ 0.66
HDDC2-204ENST00000608295 RRP7AQ9Y3A4 280 aaKnown RBP19.19■□□□□ 0.66
HDDC2-204ENST00000608295 HEG1Q9ULI3 1381 aa19.19■□□□□ 0.66
HDDC2-204ENST00000608295 CYP19A1P11511 503 aaPredicted RBP19.18■□□□□ 0.66
HDDC2-204ENST00000608295 NFE2L2Q16236 605 aa19.18■□□□□ 0.66
HDDC2-204ENST00000608295 MIS18AQ9NYP9 233 aa19.18■□□□□ 0.66
HDDC2-204ENST00000608295 DCAF8L1A6NGE4 600 aa19.17■□□□□ 0.66
HDDC2-204ENST00000608295 MMP10P09238 476 aa19.17■□□□□ 0.66
HDDC2-204ENST00000608295 COL15A1P39059 1388 aa19.17■□□□□ 0.66
HDDC2-204ENST00000608295 KDM3BQ7LBC6 1761 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms