RNA–Protein interactions for RNA: ENST00000607320.5

RFTN1-212, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 3

Gene RFTN1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-212ENST00000607320 EYA1Q99502 592 aa14.65□□□□□ -0.06
RFTN1-212ENST00000607320 PALLDQ8WX93 1383 aa14.64□□□□□ -0.07
RFTN1-212ENST00000607320 PLEKHG2Q9H7P9 1386 aa14.64□□□□□ -0.07
RFTN1-212ENST00000607320 NKX1-1Q15270 411 aaPredicted RBP14.64□□□□□ -0.07
RFTN1-212ENST00000607320 BBXQ8WY36 941 aaPredicted RBP14.64□□□□□ -0.07
RFTN1-212ENST00000607320 ECM2O94769 699 aaPredicted RBP14.63□□□□□ -0.07
RFTN1-212ENST00000607320 EIF4A2Q14240 407 aaKnown RBP14.63□□□□□ -0.07
RFTN1-212ENST00000607320 IFNL2Q8IZJ0 200 aa14.62□□□□□ -0.07
RFTN1-212ENST00000607320 MORC1Q86VD1 984 aa14.61□□□□□ -0.07
RFTN1-212ENST00000607320 FLAD1Q8NFF5 587 aa14.61□□□□□ -0.07
RFTN1-212ENST00000607320 KNSTRNQ9Y448 316 aa14.61□□□□□ -0.07
RFTN1-212ENST00000607320 C4BP0C0L5 1744 aa14.61□□□□□ -0.07
RFTN1-212ENST00000607320 PIGBQ92521 554 aa14.6□□□□□ -0.07
RFTN1-212ENST00000607320 TMOD3Q9NYL9 352 aa14.6□□□□□ -0.07
RFTN1-212ENST00000607320 IGSF1Q8N6C5 1336 aa14.6□□□□□ -0.07
RFTN1-212ENST00000607320 PHKG2P15735 406 aa14.59□□□□□ -0.07
RFTN1-212ENST00000607320 COL23A1Q86Y22 540 aaPredicted RBP14.59□□□□□ -0.07
RFTN1-212ENST00000607320 UBR3Q6ZT12 1888 aa14.59□□□□□ -0.07
RFTN1-212ENST00000607320 AK7Q96M32 723 aa14.58□□□□□ -0.08
RFTN1-212ENST00000607320 HSP90AB1P08238 724 aaKnown RBP14.57□□□□□ -0.08
RFTN1-212ENST00000607320 PLEKHO1Q53GL0 409 aaPredicted RBP14.57□□□□□ -0.08
RFTN1-212ENST00000607320 LOC102724428A0A0B4J2F2 783 aa14.56□□□□□ -0.08
RFTN1-212ENST00000607320 SPDYE2BA6NHP3 402 aa14.56□□□□□ -0.08
RFTN1-212ENST00000607320 SPDYE6P0CI01 402 aa14.56□□□□□ -0.08
RFTN1-212ENST00000607320 SIK1P57059 783 aa14.56□□□□□ -0.08
RFTN1-212ENST00000607320 GPR162Q16538 588 aa14.56□□□□□ -0.08
RFTN1-212ENST00000607320 SPDYE2Q495Y8 402 aa14.56□□□□□ -0.08
RFTN1-212ENST00000607320 AMOTQ4VCS5 1084 aa14.55□□□□□ -0.08
RFTN1-212ENST00000607320 PLCD3Q8N3E9 789 aa14.55□□□□□ -0.08
RFTN1-212ENST00000607320 SSUH2Q9Y2M2 353 aa14.55□□□□□ -0.08
RFTN1-212ENST00000607320 KIF7Q2M1P5 1343 aa14.55□□□□□ -0.08
RFTN1-212ENST00000607320 UTRNP46939 3433 aa14.54□□□□□ -0.08
RFTN1-212ENST00000607320 ERVV-2B6SEH9 535 aa14.54□□□□□ -0.08
RFTN1-212ENST00000607320 MSL1Q68DK7 614 aa14.54□□□□□ -0.08
RFTN1-212ENST00000607320 DCAF5Q96JK2 942 aa14.54□□□□□ -0.08
RFTN1-212ENST00000607320 ASAP1Q9ULH1 1129 aa14.54□□□□□ -0.08
RFTN1-212ENST00000607320 ZNF831Q5JPB2 1677 aa14.53□□□□□ -0.08
RFTN1-212ENST00000607320 SSFA2P28290 1259 aa14.53□□□□□ -0.08
RFTN1-212ENST00000607320 ATP6V1AP38606 617 aa14.53□□□□□ -0.08
RFTN1-212ENST00000607320 ZNF530Q6P9A1 599 aaPredicted RBP14.53□□□□□ -0.08
RFTN1-212ENST00000607320 C1orf141Q5JVX7 400 aa14.52□□□□□ -0.09
RFTN1-212ENST00000607320 PELP1Q8IZL8 1130 aaKnown RBP14.52□□□□□ -0.09
RFTN1-212ENST00000607320 LINC00116Q8NCU8 138 aa14.52□□□□□ -0.09
RFTN1-212ENST00000607320 ATG3Q9NT62 314 aa14.52□□□□□ -0.09
RFTN1-212ENST00000607320 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.51□□□□□ -0.09
RFTN1-212ENST00000607320 PHF14O94880 888 aa14.51□□□□□ -0.09
RFTN1-212ENST00000607320 SULT6B1Q6IMI4 303 aa14.51□□□□□ -0.09
RFTN1-212ENST00000607320 NLGN2Q8NFZ4 835 aa14.51□□□□□ -0.09
RFTN1-212ENST00000607320 KDRP35968 1356 aa14.5□□□□□ -0.09
RFTN1-212ENST00000607320 IL13P35225 146 aa14.5□□□□□ -0.09
RFTN1-212ENST00000607320 CABP4P57796 275 aa14.5□□□□□ -0.09
RFTN1-212ENST00000607320 AEBP1Q8IUX7 1158 aa14.5□□□□□ -0.09
RFTN1-212ENST00000607320 CD2APQ9Y5K6 639 aa14.5□□□□□ -0.09
RFTN1-212ENST00000607320 VIRMAQ69YN4 1812 aaKnown RBP14.5□□□□□ -0.09
RFTN1-212ENST00000607320 SCN11AQ9UI33 1791 aa14.5□□□□□ -0.09
RFTN1-212ENST00000607320 KDM6AO15550 1401 aaPredicted RBP14.49□□□□□ -0.09
RFTN1-212ENST00000607320 GNPATO15228 680 aa14.49□□□□□ -0.09
RFTN1-212ENST00000607320 MTHFSP49914 203 aa14.49□□□□□ -0.09
RFTN1-212ENST00000607320 ITPK1Q13572 414 aa14.49□□□□□ -0.09
RFTN1-212ENST00000607320 ZNF784Q8NCA9 323 aaPredicted RBP14.49□□□□□ -0.09
RFTN1-212ENST00000607320 RBM42Q9BTD8 480 aaKnown RBP14.49□□□□□ -0.09
RFTN1-212ENST00000607320 COL5A3P25940 1745 aaPredicted RBP14.49□□□□□ -0.09
RFTN1-212ENST00000607320 GRIN3BO60391 1043 aa14.48□□□□□ -0.09
RFTN1-212ENST00000607320 PAXIP1Q6ZW49 1069 aaPredicted RBP14.48□□□□□ -0.09
RFTN1-212ENST00000607320 AMIGO3Q86WK7 504 aa14.48□□□□□ -0.09
RFTN1-212ENST00000607320 TAOK2Q9UL54 1235 aa14.48□□□□□ -0.09
RFTN1-212ENST00000607320 PER1O15534 1290 aaPredicted RBP14.47□□□□□ -0.09
RFTN1-212ENST00000607320 RTCBQ9Y3I0 505 aaKnown RBP14.47□□□□□ -0.09
RFTN1-212ENST00000607320 GOLGB1Q14789 3259 aaKnown RBP14.47□□□□□ -0.09
RFTN1-212ENST00000607320 MYH14Q7Z406 1995 aaKnown RBP14.45□□□□□ -0.1
RFTN1-212ENST00000607320 CNTNAP4Q9C0A0 1308 aa14.45□□□□□ -0.1
RFTN1-212ENST00000607320 AKAP4Q5JQC9 854 aa14.45□□□□□ -0.1
RFTN1-212ENST00000607320 CC2D1BQ5T0F9 858 aaKnown RBP14.45□□□□□ -0.1
RFTN1-212ENST00000607320 TRAPPC3LQ5T215 181 aa14.45□□□□□ -0.1
RFTN1-212ENST00000607320 RC3H1Q5TC82 1133 aaKnown RBP14.45□□□□□ -0.1
RFTN1-212ENST00000607320 SMIM5Q71RC9 77 aa14.45□□□□□ -0.1
RFTN1-212ENST00000607320 NPC1L1Q9UHC9 1359 aa14.45□□□□□ -0.1
RFTN1-212ENST00000607320 RGL2O15211 777 aa14.44□□□□□ -0.1
RFTN1-212ENST00000607320 DIAPH1O60610 1272 aaKnown RBP14.44□□□□□ -0.1
RFTN1-212ENST00000607320 YBX3P16989 372 aaKnown RBP eCLIP14.44□□□□□ -0.1
RFTN1-212ENST00000607320 DSG3P32926 999 aa14.44□□□□□ -0.1
RFTN1-212ENST00000607320 MIER1Q8N108 512 aa14.44□□□□□ -0.1
RFTN1-212ENST00000607320 NFATC2IPQ8NCF5 419 aa14.44□□□□□ -0.1
RFTN1-212ENST00000607320 SLC4A9Q96Q91 983 aa14.44□□□□□ -0.1
RFTN1-212ENST00000607320 CFAP44Q96MT7 982 aa14.43□□□□□ -0.1
RFTN1-212ENST00000607320 CICQ96RK0 1608 aaPredicted RBP14.43□□□□□ -0.1
RFTN1-212ENST00000607320 C4AP0C0L4 1744 aa14.42□□□□□ -0.1
RFTN1-212ENST00000607320 PTCD1O75127 700 aaKnown RBP14.42□□□□□ -0.1
RFTN1-212ENST00000607320 RPS6KA4O75676 772 aa14.42□□□□□ -0.1
RFTN1-212ENST00000607320 HMOX1P09601 288 aa14.42□□□□□ -0.1
RFTN1-212ENST00000607320 NLGN1Q8N2Q7 840 aa14.42□□□□□ -0.1
RFTN1-212ENST00000607320 KIF13BQ9NQT8 1826 aa14.42□□□□□ -0.1
RFTN1-212ENST00000607320 MMP10P09238 476 aa14.41□□□□□ -0.1
RFTN1-212ENST00000607320 RFC4P35249 363 aa14.41□□□□□ -0.1
RFTN1-212ENST00000607320 ZBTB47Q9UFB7 747 aaPredicted RBP14.41□□□□□ -0.1
RFTN1-212ENST00000607320 TJP1Q07157 1748 aa14.41□□□□□ -0.1
RFTN1-212ENST00000607320 ARHGEF1Q92888 912 aaKnown RBP14.4□□□□□ -0.1
RFTN1-212ENST00000607320 SLC52A2Q9HAB3 445 aa14.4□□□□□ -0.1
RFTN1-212ENST00000607320 MRC1P22897 1456 aa14.39□□□□□ -0.11
RFTN1-212ENST00000607320 RNMTO43148 476 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms