RNA–Protein interactions for RNA: ENST00000606883.2

RN7SL840P-201, Transcript of RNA, 7SL, cytoplasmic 840, pseudogene, humanhuman

BASIC

Gene RN7SL840P, Length 284 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL840P-201ENST00000606883 U2AF1Q01081 240 aaKnown RBP eCLIP10.64□□□□□ -0.71
RN7SL840P-201ENST00000606883 WDR43Q15061 677 aaKnown RBP eCLIP10.64□□□□□ -0.71
RN7SL840P-201ENST00000606883 SMARCC1Q92922 1105 aaPredicted RBP10.64□□□□□ -0.71
RN7SL840P-201ENST00000606883 DOT1LQ8TEK3 1739 aa10.64□□□□□ -0.71
RN7SL840P-201ENST00000606883 SHANK3Q9BYB0 1731 aa10.64□□□□□ -0.71
RN7SL840P-201ENST00000606883 PNPLA7Q6ZV29 1317 aa10.63□□□□□ -0.71
RN7SL840P-201ENST00000606883 U2SURPO15042 1029 aaKnown RBP10.63□□□□□ -0.71
RN7SL840P-201ENST00000606883 AMOTQ4VCS5 1084 aa10.63□□□□□ -0.71
RN7SL840P-201ENST00000606883 SMIM5Q71RC9 77 aa10.63□□□□□ -0.71
RN7SL840P-201ENST00000606883 C1orf141Q5JVX7 400 aa10.62□□□□□ -0.71
RN7SL840P-201ENST00000606883 COL23A1Q86Y22 540 aaPredicted RBP10.62□□□□□ -0.71
RN7SL840P-201ENST00000606883 DCAF5Q96JK2 942 aa10.62□□□□□ -0.71
RN7SL840P-201ENST00000606883 RSPH6AQ9H0K4 717 aa10.62□□□□□ -0.71
RN7SL840P-201ENST00000606883 ATG3Q9NT62 314 aa10.62□□□□□ -0.71
RN7SL840P-201ENST00000606883 ADAMTS8Q9UP79 889 aa10.62□□□□□ -0.71
RN7SL840P-201ENST00000606883 LOC102724428A0A0B4J2F2 783 aa10.61□□□□□ -0.71
RN7SL840P-201ENST00000606883 HSP90AB1P08238 724 aaKnown RBP10.61□□□□□ -0.71
RN7SL840P-201ENST00000606883 SIK1P57059 783 aa10.61□□□□□ -0.71
RN7SL840P-201ENST00000606883 CABP4P57796 275 aa10.61□□□□□ -0.71
RN7SL840P-201ENST00000606883 KLHL34Q8N239 644 aa10.61□□□□□ -0.71
RN7SL840P-201ENST00000606883 ARXQ96QS3 562 aa10.61□□□□□ -0.71
RN7SL840P-201ENST00000606883 PLEKHF1Q96S99 279 aa10.61□□□□□ -0.71
RN7SL840P-201ENST00000606883 SGIP1Q9BQI5 828 aa10.61□□□□□ -0.71
RN7SL840P-201ENST00000606883 RBM42Q9BTD8 480 aaKnown RBP10.61□□□□□ -0.71
RN7SL840P-201ENST00000606883 ERVV-2B6SEH9 535 aa10.6□□□□□ -0.71
RN7SL840P-201ENST00000606883 PHF14O94880 888 aa10.6□□□□□ -0.71
RN7SL840P-201ENST00000606883 ATP6V1AP38606 617 aa10.6□□□□□ -0.71
RN7SL840P-201ENST00000606883 MSL1Q68DK7 614 aa10.6□□□□□ -0.71
RN7SL840P-201ENST00000606883 NGEFQ8N5V2 710 aa10.6□□□□□ -0.71
RN7SL840P-201ENST00000606883 NFATC2IPQ8NCF5 419 aa10.6□□□□□ -0.71
RN7SL840P-201ENST00000606883 SLC16A10Q8TF71 515 aa10.6□□□□□ -0.71
RN7SL840P-201ENST00000606883 AK7Q96M32 723 aa10.6□□□□□ -0.71
RN7SL840P-201ENST00000606883 FHDC1Q9C0D6 1143 aaPredicted RBP10.6□□□□□ -0.71
RN7SL840P-201ENST00000606883 POLD1P28340 1107 aa10.59□□□□□ -0.71
RN7SL840P-201ENST00000606883 PRKAR2BP31323 418 aa10.59□□□□□ -0.71
RN7SL840P-201ENST00000606883 ITPK1Q13572 414 aa10.59□□□□□ -0.71
RN7SL840P-201ENST00000606883 RUNDC1Q96C34 613 aa10.59□□□□□ -0.71
RN7SL840P-201ENST00000606883 SYT17Q9BSW7 474 aa10.59□□□□□ -0.71
RN7SL840P-201ENST00000606883 LGR6Q9HBX8 967 aa10.59□□□□□ -0.71
RN7SL840P-201ENST00000606883 CASZ1Q86V15 1759 aa10.59□□□□□ -0.71
RN7SL840P-201ENST00000606883 PAPPAQ13219 1627 aa10.58□□□□□ -0.72
RN7SL840P-201ENST00000606883 PKD1L3Q7Z443 1732 aa10.58□□□□□ -0.72
RN7SL840P-201ENST00000606883 PTCD1O75127 700 aaKnown RBP10.58□□□□□ -0.72
RN7SL840P-201ENST00000606883 NEFMP07197 916 aa10.58□□□□□ -0.72
RN7SL840P-201ENST00000606883 MTHFSDQ2M296 383 aaKnown RBP10.58□□□□□ -0.72
RN7SL840P-201ENST00000606883 AMIGO3Q86WK7 504 aa10.58□□□□□ -0.72
RN7SL840P-201ENST00000606883 LINC00116Q8NCU8 138 aa10.58□□□□□ -0.72
RN7SL840P-201ENST00000606883 AKAP4Q5JQC9 854 aa10.57□□□□□ -0.72
RN7SL840P-201ENST00000606883 GAS2L2Q8NHY3 880 aa10.57□□□□□ -0.72
RN7SL840P-201ENST00000606883 SLC4A9Q96Q91 983 aa10.57□□□□□ -0.72
RN7SL840P-201ENST00000606883 TOGARAM1Q9Y4F4 1720 aa10.57□□□□□ -0.72
RN7SL840P-201ENST00000606883 KDM6AO15550 1401 aaPredicted RBP10.57□□□□□ -0.72
RN7SL840P-201ENST00000606883 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.56□□□□□ -0.72
RN7SL840P-201ENST00000606883 GNPATO15228 680 aa10.56□□□□□ -0.72
RN7SL840P-201ENST00000606883 HTATSF1O43719 755 aaKnown RBP10.56□□□□□ -0.72
RN7SL840P-201ENST00000606883 HMGB2P26583 209 aaKnown RBP10.56□□□□□ -0.72
RN7SL840P-201ENST00000606883 FLAD1Q8NFF5 587 aa10.56□□□□□ -0.72
RN7SL840P-201ENST00000606883 PHACTR3Q96KR7 559 aa10.56□□□□□ -0.72
RN7SL840P-201ENST00000606883 MAPK8IP3Q9UPT6 1336 aa10.56□□□□□ -0.72
RN7SL840P-201ENST00000606883 RNMTO43148 476 aaKnown RBP10.55□□□□□ -0.72
RN7SL840P-201ENST00000606883 FAM9BQ8IZU0 186 aa10.55□□□□□ -0.72
RN7SL840P-201ENST00000606883 LY75O60449 1722 aa10.55□□□□□ -0.72
RN7SL840P-201ENST00000606883 ITGB4P16144 1822 aa10.54□□□□□ -0.72
RN7SL840P-201ENST00000606883 SLC39A6Q13433 755 aa10.54□□□□□ -0.72
RN7SL840P-201ENST00000606883 NFE2L2Q16236 605 aa10.54□□□□□ -0.72
RN7SL840P-201ENST00000606883 CCDC27Q2M243 656 aa10.54□□□□□ -0.72
RN7SL840P-201ENST00000606883 PELP1Q8IZL8 1130 aaKnown RBP10.54□□□□□ -0.72
RN7SL840P-201ENST00000606883 SLC52A2Q9HAB3 445 aa10.54□□□□□ -0.72
RN7SL840P-201ENST00000606883 SSFA2P28290 1259 aa10.53□□□□□ -0.72
RN7SL840P-201ENST00000606883 TMPOP42166 694 aaKnown RBP10.53□□□□□ -0.72
RN7SL840P-201ENST00000606883 LMOD3Q0VAK6 560 aa10.53□□□□□ -0.72
RN7SL840P-201ENST00000606883 TRAPPC3LQ5T215 181 aa10.53□□□□□ -0.72
RN7SL840P-201ENST00000606883 NLGN2Q8NFZ4 835 aa10.53□□□□□ -0.72
RN7SL840P-201ENST00000606883 GNAT3A8MTJ3 354 aa10.52□□□□□ -0.73
RN7SL840P-201ENST00000606883 APAF1O14727 1248 aa10.52□□□□□ -0.73
RN7SL840P-201ENST00000606883 YY1P25490 414 aa10.52□□□□□ -0.73
RN7SL840P-201ENST00000606883 GPR162Q16538 588 aa10.52□□□□□ -0.73
RN7SL840P-201ENST00000606883 IL17REQ8NFR9 667 aa10.52□□□□□ -0.73
RN7SL840P-201ENST00000606883 RTCBQ9Y3I0 505 aaKnown RBP10.52□□□□□ -0.73
RN7SL840P-201ENST00000606883 RC3H1Q5TC82 1133 aaKnown RBP10.51□□□□□ -0.73
RN7SL840P-201ENST00000606883 CCDC146Q8IYE0 955 aa10.51□□□□□ -0.73
RN7SL840P-201ENST00000606883 ARHGEF1Q92888 912 aaKnown RBP10.51□□□□□ -0.73
RN7SL840P-201ENST00000606883 CEMIPQ8WUJ3 1361 aa10.51□□□□□ -0.73
RN7SL840P-201ENST00000606883 MAP3K5Q99683 1374 aa10.51□□□□□ -0.73
RN7SL840P-201ENST00000606883 C5P01031 1676 aa10.5□□□□□ -0.73
RN7SL840P-201ENST00000606883 C4BP0C0L5 1744 aa10.5□□□□□ -0.73
RN7SL840P-201ENST00000606883 RPS6KA4O75676 772 aa10.5□□□□□ -0.73
RN7SL840P-201ENST00000606883 CRKLP46109 303 aaKnown RBP10.5□□□□□ -0.73
RN7SL840P-201ENST00000606883 RIPK4P57078 832 aa10.5□□□□□ -0.73
RN7SL840P-201ENST00000606883 DNAJC10Q8IXB1 793 aa10.5□□□□□ -0.73
RN7SL840P-201ENST00000606883 WWC3Q9ULE0 1092 aa10.5□□□□□ -0.73
RN7SL840P-201ENST00000606883 TUBGCP6Q96RT7 1819 aa10.49□□□□□ -0.73
RN7SL840P-201ENST00000606883 RFC4P35249 363 aa10.49□□□□□ -0.73
RN7SL840P-201ENST00000606883 CALD1Q05682 793 aaKnown RBP10.49□□□□□ -0.73
RN7SL840P-201ENST00000606883 TEFQ10587 303 aa10.49□□□□□ -0.73
RN7SL840P-201ENST00000606883 RTF1Q92541 710 aaKnown RBP10.49□□□□□ -0.73
RN7SL840P-201ENST00000606883 BABAM1Q9NWV8 329 aa10.49□□□□□ -0.73
RN7SL840P-201ENST00000606883 TRIM35Q9UPQ4 493 aa10.49□□□□□ -0.73
RN7SL840P-201ENST00000606883 MMP10P09238 476 aa10.48□□□□□ -0.73
RN7SL840P-201ENST00000606883 INTS5Q6P9B9 1019 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms