RNA–Protein interactions for RNA: ENST00000606699.5

NECAB3-220, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,022 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-220ENST00000606699 ITPK1Q13572 414 aa25.55■■□□□ 1.68
NECAB3-220ENST00000606699 ANKRD26Q9UPS8 1709 aa25.54■■□□□ 1.68
NECAB3-220ENST00000606699 HSPA6P17066 643 aa25.54■■□□□ 1.68
NECAB3-220ENST00000606699 ATG3Q9NT62 314 aa25.54■■□□□ 1.68
NECAB3-220ENST00000606699 ERVV-2B6SEH9 535 aa25.51■■□□□ 1.67
NECAB3-220ENST00000606699 TGFB2P61812 414 aa25.51■■□□□ 1.67
NECAB3-220ENST00000606699 TRAPPC3LQ5T215 181 aa25.51■■□□□ 1.67
NECAB3-220ENST00000606699 NLGN1Q8N2Q7 840 aa25.51■■□□□ 1.67
NECAB3-220ENST00000606699 ZNF526Q8TF50 670 aaPredicted RBP25.51■■□□□ 1.67
NECAB3-220ENST00000606699 MMP10P09238 476 aa25.5■■□□□ 1.67
NECAB3-220ENST00000606699 EIF4A2Q14240 407 aaKnown RBP25.5■■□□□ 1.67
NECAB3-220ENST00000606699 RTCBQ9Y3I0 505 aaKnown RBP25.5■■□□□ 1.67
NECAB3-220ENST00000606699 HSP90AB1P08238 724 aaKnown RBP25.49■■□□□ 1.67
NECAB3-220ENST00000606699 ADRA2BP18089 450 aa25.49■■□□□ 1.67
NECAB3-220ENST00000606699 RC3H1Q5TC82 1133 aaKnown RBP25.49■■□□□ 1.67
NECAB3-220ENST00000606699 DCAF5Q96JK2 942 aa25.48■■□□□ 1.67
NECAB3-220ENST00000606699 WWC3Q9ULE0 1092 aa25.48■■□□□ 1.67
NECAB3-220ENST00000606699 KDRP35968 1356 aa25.46■■□□□ 1.67
NECAB3-220ENST00000606699 KIF3CO14782 793 aa25.44■■□□□ 1.66
NECAB3-220ENST00000606699 PLEKHO1Q53GL0 409 aaPredicted RBP25.44■■□□□ 1.66
NECAB3-220ENST00000606699 ARHGEF1Q92888 912 aaKnown RBP25.44■■□□□ 1.66
NECAB3-220ENST00000606699 SLC4A9Q96Q91 983 aa25.44■■□□□ 1.66
NECAB3-220ENST00000606699 RBM42Q9BTD8 480 aaKnown RBP25.44■■□□□ 1.66
NECAB3-220ENST00000606699 CNTNAP4Q9C0A0 1308 aa25.43■■□□□ 1.66
NECAB3-220ENST00000606699 PXDNLA1KZ92 1463 aa25.43■■□□□ 1.66
NECAB3-220ENST00000606699 RPS6KA4O75676 772 aa25.43■■□□□ 1.66
NECAB3-220ENST00000606699 TNNT2P45379 298 aaPredicted RBP25.43■■□□□ 1.66
NECAB3-220ENST00000606699 AMOTQ4VCS5 1084 aa25.43■■□□□ 1.66
NECAB3-220ENST00000606699 CICQ96RK0 1608 aaPredicted RBP25.43■■□□□ 1.66
NECAB3-220ENST00000606699 CCDC87Q9NVE4 849 aa25.42■■□□□ 1.66
NECAB3-220ENST00000606699 ZNF831Q5JPB2 1677 aa25.42■■□□□ 1.66
NECAB3-220ENST00000606699 RFC4P35249 363 aa25.41■■□□□ 1.66
NECAB3-220ENST00000606699 A0A0G2JLW4 131 aa25.4■■□□□ 1.66
NECAB3-220ENST00000606699 GYS1P13807 737 aa25.4■■□□□ 1.66
NECAB3-220ENST00000606699 BCS1LQ9Y276 419 aa25.4■■□□□ 1.66
NECAB3-220ENST00000606699 KIF13BQ9NQT8 1826 aa25.4■■□□□ 1.66
NECAB3-220ENST00000606699 C10orf71Q711Q0 1435 aa25.39■■□□□ 1.66
NECAB3-220ENST00000606699 CABP4P57796 275 aa25.39■■□□□ 1.66
NECAB3-220ENST00000606699 PARP3Q9Y6F1 533 aa25.39■■□□□ 1.66
NECAB3-220ENST00000606699 ZNF530Q6P9A1 599 aaPredicted RBP25.37■■□□□ 1.65
NECAB3-220ENST00000606699 POLR3GLQ9BT43 218 aa25.37■■□□□ 1.65
NECAB3-220ENST00000606699 TOMM70O94826 608 aa25.36■■□□□ 1.65
NECAB3-220ENST00000606699 ARHGAP27Q6ZUM4 889 aa25.36■■□□□ 1.65
NECAB3-220ENST00000606699 DPEP1P16444 411 aa25.35■■□□□ 1.65
NECAB3-220ENST00000606699 MTHFSP49914 203 aa25.35■■□□□ 1.65
NECAB3-220ENST00000606699 APLP1P51693 650 aa25.35■■□□□ 1.65
NECAB3-220ENST00000606699 FCHSD2O94868 740 aa25.34■■□□□ 1.65
NECAB3-220ENST00000606699 C1orf141Q5JVX7 400 aa25.34■■□□□ 1.65
NECAB3-220ENST00000606699 KDM6AO15550 1401 aaPredicted RBP25.33■■□□□ 1.65
NECAB3-220ENST00000606699 PANK3Q9H999 370 aa25.33■■□□□ 1.65
NECAB3-220ENST00000606699 KIAA1551Q9HCM1 1747 aa25.32■■□□□ 1.64
NECAB3-220ENST00000606699 PTCD1O75127 700 aaKnown RBP25.31■■□□□ 1.64
NECAB3-220ENST00000606699 KCNA3P22001 575 aa25.31■■□□□ 1.64
NECAB3-220ENST00000606699 CRKLP46109 303 aaKnown RBP25.31■■□□□ 1.64
NECAB3-220ENST00000606699 PIM2Q9P1W9 311 aa25.31■■□□□ 1.64
NECAB3-220ENST00000606699 C4AP0C0L4 1744 aa25.31■■□□□ 1.64
NECAB3-220ENST00000606699 COL5A3P25940 1745 aaPredicted RBP25.3■■□□□ 1.64
NECAB3-220ENST00000606699 EIF4G2P78344 907 aaKnown RBP eCLIP25.3■■□□□ 1.642e-6■■■■□ 22.4
NECAB3-220ENST00000606699 NFATC2IPQ8NCF5 419 aa25.3■■□□□ 1.64
NECAB3-220ENST00000606699 N4BP2Q86UW6 1770 aaPredicted RBP25.3■■□□□ 1.64
NECAB3-220ENST00000606699 MORC1Q86VD1 984 aa25.28■■□□□ 1.64
NECAB3-220ENST00000606699 USP42Q9H9J4 1324 aaKnown RBP25.27■■□□□ 1.64
NECAB3-220ENST00000606699 DALRD3Q5D0E6 543 aaKnown RBP25.26■■□□□ 1.63
NECAB3-220ENST00000606699 SULT6B1Q6IMI4 303 aa25.26■■□□□ 1.63
NECAB3-220ENST00000606699 AEBP1Q8IUX7 1158 aa25.26■■□□□ 1.63
NECAB3-220ENST00000606699 MYH14Q7Z406 1995 aaKnown RBP25.25■■□□□ 1.63
NECAB3-220ENST00000606699 FKBP8Q14318 412 aa25.25■■□□□ 1.63
NECAB3-220ENST00000606699 C9orf131Q5VYM1 1079 aa25.25■■□□□ 1.63
NECAB3-220ENST00000606699 DNAJC5GQ8N7S2 189 aa25.25■■□□□ 1.63
NECAB3-220ENST00000606699 RBM46Q8TBY0 533 aaKnown RBP25.25■■□□□ 1.63
NECAB3-220ENST00000606699 NMRK2Q9NPI5 230 aa25.25■■□□□ 1.63
NECAB3-220ENST00000606699 SRP68Q9UHB9 627 aaKnown RBP25.24■■□□□ 1.63
NECAB3-220ENST00000606699 HSPA5P11021 654 aaKnown RBP25.23■■□□□ 1.63
NECAB3-220ENST00000606699 TM4SF1P30408 202 aa25.22■■□□□ 1.63
NECAB3-220ENST00000606699 IL13P35225 146 aa25.22■■□□□ 1.63
NECAB3-220ENST00000606699 DDR1Q08345 913 aa25.22■■□□□ 1.63
NECAB3-220ENST00000606699 AKAP4Q5JQC9 854 aa25.22■■□□□ 1.63
NECAB3-220ENST00000606699 INTS5Q6P9B9 1019 aaKnown RBP25.22■■□□□ 1.63
NECAB3-220ENST00000606699 BRCA1P38398 1863 aaKnown RBP25.21■■□□□ 1.63
NECAB3-220ENST00000606699 C16orf71Q8IYS4 520 aaPredicted RBP25.21■■□□□ 1.63
NECAB3-220ENST00000606699 KNSTRNQ9Y448 316 aa25.21■■□□□ 1.63
NECAB3-220ENST00000606699 KDM2BQ8NHM5 1336 aa25.2■■□□□ 1.62
NECAB3-220ENST00000606699 POLRMTO00411 1230 aaKnown RBP25.2■■□□□ 1.62
NECAB3-220ENST00000606699 ZPR1O75312 459 aa25.2■■□□□ 1.62
NECAB3-220ENST00000606699 ARFGEF1Q9Y6D6 1849 aa25.19■■□□□ 1.62
NECAB3-220ENST00000606699 FSTL1Q12841 308 aa25.19■■□□□ 1.62
NECAB3-220ENST00000606699 SLC52A2Q9HAB3 445 aa25.19■■□□□ 1.62
NECAB3-220ENST00000606699 RNF181Q9P0P0 153 aa25.17■■□□□ 1.62
NECAB3-220ENST00000606699 SOS1Q07889 1333 aaPredicted RBP25.15■■□□□ 1.62
NECAB3-220ENST00000606699 CHRNA5P30532 468 aa25.15■■□□□ 1.62
NECAB3-220ENST00000606699 USPL1Q5W0Q7 1092 aa25.15■■□□□ 1.62
NECAB3-220ENST00000606699 DNAJC10Q8IXB1 793 aa25.15■■□□□ 1.62
NECAB3-220ENST00000606699 CYP19A1P11511 503 aaPredicted RBP25.14■■□□□ 1.62
NECAB3-220ENST00000606699 LGR6Q9HBX8 967 aa25.14■■□□□ 1.62
NECAB3-220ENST00000606699 TJP1Q07157 1748 aa25.14■■□□□ 1.61
NECAB3-220ENST00000606699 ZC3H4Q9UPT8 1303 aaKnown RBP25.13■■□□□ 1.61
NECAB3-220ENST00000606699 NARFQ9UHQ1 456 aa25.13■■□□□ 1.61
NECAB3-220ENST00000606699 RNMTO43148 476 aaKnown RBP25.12■■□□□ 1.61
NECAB3-220ENST00000606699 VSIG10Q8N0Z9 540 aa25.12■■□□□ 1.61
NECAB3-220ENST00000606699 SCN11AQ9UI33 1791 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms