RNA–Protein interactions for RNA: ENST00000605833.1

VIM-AS1-202, VIM antisense RNA 1, humanhuman

TSL 3 BASIC

Gene VIM-AS1, Length 918 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-202ENST00000605833 ATG3Q9NT62 314 aa28.78■■■□□ 2.2
VIM-AS1-202ENST00000605833 KDRP35968 1356 aa28.76■■■□□ 2.2
VIM-AS1-202ENST00000605833 COL5A3P25940 1745 aaPredicted RBP28.76■■■□□ 2.19
VIM-AS1-202ENST00000605833 ZNF526Q8TF50 670 aaPredicted RBP28.75■■■□□ 2.19
VIM-AS1-202ENST00000605833 TIMELESSQ9UNS1 1208 aa28.75■■■□□ 2.19
VIM-AS1-202ENST00000605833 KIAA1551Q9HCM1 1747 aa28.74■■■□□ 2.19
VIM-AS1-202ENST00000605833 CICQ96RK0 1608 aaPredicted RBP28.73■■■□□ 2.19
VIM-AS1-202ENST00000605833 KIF13BQ9NQT8 1826 aa28.73■■■□□ 2.19
VIM-AS1-202ENST00000605833 N4BP2Q86UW6 1770 aaPredicted RBP28.73■■■□□ 2.19
VIM-AS1-202ENST00000605833 GPBP1L1Q9HC44 474 aaPredicted RBP28.72■■■□□ 2.19
VIM-AS1-202ENST00000605833 ZNF831Q5JPB2 1677 aa28.72■■■□□ 2.19
VIM-AS1-202ENST00000605833 MMP10P09238 476 aa28.71■■■□□ 2.19
VIM-AS1-202ENST00000605833 SLC4A9Q96Q91 983 aa28.71■■■□□ 2.19
VIM-AS1-202ENST00000605833 KDM6AO15550 1401 aaPredicted RBP28.7■■■□□ 2.19
VIM-AS1-202ENST00000605833 RBM42Q9BTD8 480 aaKnown RBP28.7■■■□□ 2.18
VIM-AS1-202ENST00000605833 C4AP0C0L4 1744 aa28.69■■■□□ 2.18
VIM-AS1-202ENST00000605833 PLEKHG2Q9H7P9 1386 aa28.69■■■□□ 2.18
VIM-AS1-202ENST00000605833 PXDNLA1KZ92 1463 aa28.69■■■□□ 2.18
VIM-AS1-202ENST00000605833 PANK3Q9H999 370 aa28.67■■■□□ 2.18
VIM-AS1-202ENST00000605833 HSPA5P11021 654 aaKnown RBP28.66■■■□□ 2.18
VIM-AS1-202ENST00000605833 ZNF530Q6P9A1 599 aaPredicted RBP28.66■■■□□ 2.18
VIM-AS1-202ENST00000605833 RTCBQ9Y3I0 505 aaKnown RBP28.66■■■□□ 2.18
VIM-AS1-202ENST00000605833 MYH14Q7Z406 1995 aaKnown RBP28.66■■■□□ 2.18
VIM-AS1-202ENST00000605833 ERVV-2B6SEH9 535 aa28.65■■■□□ 2.18
VIM-AS1-202ENST00000605833 AEBP1Q8IUX7 1158 aa28.65■■■□□ 2.18
VIM-AS1-202ENST00000605833 DCAF5Q96JK2 942 aa28.65■■■□□ 2.18
VIM-AS1-202ENST00000605833 CLSPNQ9HAW4 1339 aa28.65■■■□□ 2.18
VIM-AS1-202ENST00000605833 PLEKHO1Q53GL0 409 aaPredicted RBP28.64■■■□□ 2.18
VIM-AS1-202ENST00000605833 TRAPPC3LQ5T215 181 aa28.64■■■□□ 2.18
VIM-AS1-202ENST00000605833 C10orf71Q711Q0 1435 aa28.63■■■□□ 2.17
VIM-AS1-202ENST00000605833 EIF4G2P78344 907 aaKnown RBP eCLIP28.63■■■□□ 2.17
VIM-AS1-202ENST00000605833 HSP90AB1P08238 724 aaKnown RBP28.62■■■□□ 2.17
VIM-AS1-202ENST00000605833 TJP1Q07157 1748 aa28.61■■■□□ 2.17
VIM-AS1-202ENST00000605833 CABP4P57796 275 aa28.61■■■□□ 2.17
VIM-AS1-202ENST00000605833 CNTNAP4Q9C0A0 1308 aa28.61■■■□□ 2.17
VIM-AS1-202ENST00000605833 BRCA1P38398 1863 aaKnown RBP28.6■■■□□ 2.17
VIM-AS1-202ENST00000605833 ARHGEF1Q92888 912 aaKnown RBP28.6■■■□□ 2.17
VIM-AS1-202ENST00000605833 A0A0G2JLW4 131 aa28.58■■■□□ 2.17
VIM-AS1-202ENST00000605833 GYS1P13807 737 aa28.58■■■□□ 2.17
VIM-AS1-202ENST00000605833 RC3H1Q5TC82 1133 aaKnown RBP28.58■■■□□ 2.17
VIM-AS1-202ENST00000605833 MORC1Q86VD1 984 aa28.58■■■□□ 2.17
VIM-AS1-202ENST00000605833 SCN11AQ9UI33 1791 aa28.57■■■□□ 2.16
VIM-AS1-202ENST00000605833 PTCD1O75127 700 aaKnown RBP28.57■■■□□ 2.16
VIM-AS1-202ENST00000605833 AMOTQ4VCS5 1084 aa28.57■■■□□ 2.16
VIM-AS1-202ENST00000605833 NLGN1Q8N2Q7 840 aa28.57■■■□□ 2.16
VIM-AS1-202ENST00000605833 BCS1LQ9Y276 419 aa28.57■■■□□ 2.16
VIM-AS1-202ENST00000605833 RPS6KA4O75676 772 aa28.56■■■□□ 2.16
VIM-AS1-202ENST00000605833 ADRA2BP18089 450 aa28.56■■■□□ 2.16
VIM-AS1-202ENST00000605833 RFC4P35249 363 aa28.56■■■□□ 2.16
VIM-AS1-202ENST00000605833 MTHFSP49914 203 aa28.56■■■□□ 2.16
VIM-AS1-202ENST00000605833 C1orf141Q5JVX7 400 aa28.56■■■□□ 2.16
VIM-AS1-202ENST00000605833 TGFB2P61812 414 aa28.54■■■□□ 2.16
VIM-AS1-202ENST00000605833 SULT6B1Q6IMI4 303 aa28.54■■■□□ 2.16
VIM-AS1-202ENST00000605833 CCDC87Q9NVE4 849 aa28.54■■■□□ 2.16
VIM-AS1-202ENST00000605833 KIF3CO14782 793 aa28.53■■■□□ 2.16
VIM-AS1-202ENST00000605833 DPEP1P16444 411 aa28.53■■■□□ 2.16
VIM-AS1-202ENST00000605833 HSPA6P17066 643 aa28.53■■■□□ 2.16
VIM-AS1-202ENST00000605833 VIRMAQ69YN4 1812 aaKnown RBP28.53■■■□□ 2.16
VIM-AS1-202ENST00000605833 NFATC2IPQ8NCF5 419 aa28.52■■■□□ 2.16
VIM-AS1-202ENST00000605833 PARP3Q9Y6F1 533 aa28.52■■■□□ 2.16
VIM-AS1-202ENST00000605833 CRKLP46109 303 aaKnown RBP28.51■■■□□ 2.15
VIM-AS1-202ENST00000605833 SRP68Q9UHB9 627 aaKnown RBP28.51■■■□□ 2.15
VIM-AS1-202ENST00000605833 ARFGEF1Q9Y6D6 1849 aa28.5■■■□□ 2.15
VIM-AS1-202ENST00000605833 ADAMTS7Q9UKP4 1686 aa28.5■■■□□ 2.15
VIM-AS1-202ENST00000605833 FCHSD2O94868 740 aa28.48■■■□□ 2.15
VIM-AS1-202ENST00000605833 IL13P35225 146 aa28.48■■■□□ 2.15
VIM-AS1-202ENST00000605833 ARHGAP27Q6ZUM4 889 aa28.48■■■□□ 2.15
VIM-AS1-202ENST00000605833 KNSTRNQ9Y448 316 aa28.47■■■□□ 2.15
VIM-AS1-202ENST00000605833 USP42Q9H9J4 1324 aaKnown RBP28.46■■■□□ 2.15
VIM-AS1-202ENST00000605833 DDR1Q08345 913 aa28.45■■■□□ 2.14
VIM-AS1-202ENST00000605833 FKBP8Q14318 412 aa28.45■■■□□ 2.14
VIM-AS1-202ENST00000605833 CCER1Q8TC90 406 aaPredicted RBP28.45■■■□□ 2.14
VIM-AS1-202ENST00000605833 KCNA3P22001 575 aa28.44■■■□□ 2.14
VIM-AS1-202ENST00000605833 MRC1P22897 1456 aa28.42■■■□□ 2.14
VIM-AS1-202ENST00000605833 INTS5Q6P9B9 1019 aaKnown RBP28.41■■■□□ 2.14
VIM-AS1-202ENST00000605833 DNAJC10Q8IXB1 793 aa28.41■■■□□ 2.14
VIM-AS1-202ENST00000605833 AKAP4Q5JQC9 854 aa28.4■■■□□ 2.14
VIM-AS1-202ENST00000605833 AMER1Q5JTC6 1135 aaPredicted RBP28.4■■■□□ 2.14
VIM-AS1-202ENST00000605833 LGR6Q9HBX8 967 aa28.4■■■□□ 2.14
VIM-AS1-202ENST00000605833 NMRK2Q9NPI5 230 aa28.4■■■□□ 2.14
VIM-AS1-202ENST00000605833 HMOX1P09601 288 aa28.39■■■□□ 2.14
VIM-AS1-202ENST00000605833 IFFO2Q5TF58 517 aa28.39■■■□□ 2.14
VIM-AS1-202ENST00000605833 SLC52A2Q9HAB3 445 aa28.39■■■□□ 2.14
VIM-AS1-202ENST00000605833 KCPQ6ZWJ8 1503 aa28.38■■■□□ 2.13
VIM-AS1-202ENST00000605833 CHRNA5P30532 468 aa28.38■■■□□ 2.13
VIM-AS1-202ENST00000605833 AFDNP55196 1824 aaKnown RBP28.38■■■□□ 2.13
VIM-AS1-202ENST00000605833 SLC39A6Q13433 755 aa28.37■■■□□ 2.13
VIM-AS1-202ENST00000605833 C9orf131Q5VYM1 1079 aa28.37■■■□□ 2.13
VIM-AS1-202ENST00000605833 PIM2Q9P1W9 311 aa28.37■■■□□ 2.13
VIM-AS1-202ENST00000605833 KIF7Q2M1P5 1343 aa28.36■■■□□ 2.13
VIM-AS1-202ENST00000605833 POLRMTO00411 1230 aaKnown RBP28.35■■■□□ 2.13
VIM-AS1-202ENST00000605833 DALRD3Q5D0E6 543 aaKnown RBP28.35■■■□□ 2.13
VIM-AS1-202ENST00000605833 USPL1Q5W0Q7 1092 aa28.35■■■□□ 2.13
VIM-AS1-202ENST00000605833 SOS1Q07889 1333 aaPredicted RBP28.35■■■□□ 2.13
VIM-AS1-202ENST00000605833 RNMTO43148 476 aaKnown RBP28.34■■■□□ 2.13
VIM-AS1-202ENST00000605833 TOMM70O94826 608 aa28.34■■■□□ 2.13
VIM-AS1-202ENST00000605833 UBR2Q8IWV8 1755 aa28.34■■■□□ 2.13
VIM-AS1-202ENST00000605833 ZPR1O75312 459 aa28.33■■■□□ 2.13
VIM-AS1-202ENST00000605833 SBF1O95248 1867 aa28.33■■■□□ 2.13
VIM-AS1-202ENST00000605833 COL15A1P39059 1388 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms