RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 TLR1Q15399 786 aa10.26□□□□□ -0.77
SH3D19-213ENST00000604922 GNASQ5JWF2 1037 aa10.26□□□□□ -0.77
SH3D19-213ENST00000604922 NBPF10Q6P3W6 841 aaKnown RBP10.26□□□□□ -0.77
SH3D19-213ENST00000604922 NBPF15Q8N660 670 aa10.26□□□□□ -0.77
SH3D19-213ENST00000604922 TFIP11Q9UBB9 837 aaKnown RBP10.26□□□□□ -0.77
SH3D19-213ENST00000604922 HRH3Q9Y5N1 445 aa10.26□□□□□ -0.77
SH3D19-213ENST00000604922 SENP3-EIF4A1A0A087X0R7 540 aa10.25□□□□□ -0.77
SH3D19-213ENST00000604922 WASLO00401 505 aaPredicted RBP10.25□□□□□ -0.77
SH3D19-213ENST00000604922 STAU1O95793 577 aaKnown RBP10.25□□□□□ -0.77
SH3D19-213ENST00000604922 ITGA6P23229 1130 aa10.25□□□□□ -0.77
SH3D19-213ENST00000604922 SCNN1DP51172 638 aa10.25□□□□□ -0.77
SH3D19-213ENST00000604922 KCTD17Q8N5Z5 321 aa10.25□□□□□ -0.77
SH3D19-213ENST00000604922 VSIG8P0DPA2 414 aa10.24□□□□□ -0.77
SH3D19-213ENST00000604922 FHDC1Q9C0D6 1143 aaPredicted RBP10.24□□□□□ -0.77
SH3D19-213ENST00000604922 TIMMDC1Q9NPL8 285 aa10.24□□□□□ -0.77
SH3D19-213ENST00000604922 MKRN1Q9UHC7 482 aaKnown RBP10.24□□□□□ -0.77
SH3D19-213ENST00000604922 ERBB4Q15303 1308 aa10.24□□□□□ -0.77
SH3D19-213ENST00000604922 PALM3A6NDB9 673 aaPredicted RBP10.23□□□□□ -0.77
SH3D19-213ENST00000604922 BACH1O14867 736 aa10.23□□□□□ -0.77
SH3D19-213ENST00000604922 PPP1R12CQ9BZL4 782 aa10.23□□□□□ -0.77
SH3D19-213ENST00000604922 DYRK1BQ9Y463 629 aa10.23□□□□□ -0.77
SH3D19-213ENST00000604922 CDC14CA4D256 554 aa10.22□□□□□ -0.77
SH3D19-213ENST00000604922 TMEM229AB2RXF0 380 aa10.22□□□□□ -0.77
SH3D19-213ENST00000604922 SMTNP53814 917 aa10.22□□□□□ -0.77
SH3D19-213ENST00000604922 SV2AQ7L0J3 742 aa10.22□□□□□ -0.77
SH3D19-213ENST00000604922 PPARGC1BQ86YN6 1023 aaKnown RBP10.22□□□□□ -0.77
SH3D19-213ENST00000604922 NANOS1Q8WY41 292 aaKnown RBP10.22□□□□□ -0.77
SH3D19-213ENST00000604922 GAS2L1Q99501 681 aaPredicted RBP10.22□□□□□ -0.77
SH3D19-213ENST00000604922 SERTAD1Q9UHV2 236 aa10.22□□□□□ -0.77
SH3D19-213ENST00000604922 RBM19Q9Y4C8 960 aaKnown RBP10.22□□□□□ -0.77
SH3D19-213ENST00000604922 RIPOR1Q6ZS17 1223 aa10.21□□□□□ -0.77
SH3D19-213ENST00000604922 RHBDD1Q8TEB9 315 aa10.21□□□□□ -0.77
SH3D19-213ENST00000604922 DNAAF2Q9NVR5 837 aaKnown RBP10.21□□□□□ -0.77
SH3D19-213ENST00000604922 MAFBQ9Y5Q3 323 aaPredicted RBP10.21□□□□□ -0.77
SH3D19-213ENST00000604922 PHKA2P46019 1235 aa10.2□□□□□ -0.78
SH3D19-213ENST00000604922 GSK3AP49840 483 aa10.2□□□□□ -0.78
SH3D19-213ENST00000604922 VWA5B2Q8N398 1253 aa10.2□□□□□ -0.78
SH3D19-213ENST00000604922 GMCL1Q96IK5 515 aa10.2□□□□□ -0.78
SH3D19-213ENST00000604922 SLC4A9Q96Q91 983 aa10.2□□□□□ -0.78
SH3D19-213ENST00000604922 A6NJY4 79 aa10.19□□□□□ -0.78
SH3D19-213ENST00000604922 H7C1W4 665 aa10.19□□□□□ -0.78
SH3D19-213ENST00000604922 CCDC102BQ68D86 513 aa10.19□□□□□ -0.78
SH3D19-213ENST00000604922 LARGE2Q8N3Y3 721 aa10.19□□□□□ -0.78
SH3D19-213ENST00000604922 OGFOD1Q8N543 542 aa10.19□□□□□ -0.78
SH3D19-213ENST00000604922 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.19□□□□□ -0.78
SH3D19-213ENST00000604922 A0A1B0GTH6 734 aa10.18□□□□□ -0.78
SH3D19-213ENST00000604922 LMOD1P29536 600 aaPredicted RBP10.18□□□□□ -0.78
SH3D19-213ENST00000604922 C4orf17Q53FE4 359 aa10.18□□□□□ -0.78
SH3D19-213ENST00000604922 TPCN2Q8NHX9 752 aa10.18□□□□□ -0.78
SH3D19-213ENST00000604922 NIFKQ9BYG3 293 aaKnown RBP10.18□□□□□ -0.78
SH3D19-213ENST00000604922 ZNF358Q9NW07 568 aa10.18□□□□□ -0.78
SH3D19-213ENST00000604922 ZBTB7BO15156 539 aaPredicted RBP10.17□□□□□ -0.78
SH3D19-213ENST00000604922 F11P03951 625 aa10.17□□□□□ -0.78
SH3D19-213ENST00000604922 RASA1P20936 1047 aa10.17□□□□□ -0.78
SH3D19-213ENST00000604922 CLDN10P78369 228 aa10.17□□□□□ -0.78
SH3D19-213ENST00000604922 FOXR1Q6PIV2 292 aa10.17□□□□□ -0.78
SH3D19-213ENST00000604922 LARP1Q6PKG0 1096 aaKnown RBP10.17□□□□□ -0.78
SH3D19-213ENST00000604922 TRIM22Q8IYM9 498 aa10.17□□□□□ -0.78
SH3D19-213ENST00000604922 CDK2AP1O14519 115 aa10.16□□□□□ -0.78
SH3D19-213ENST00000604922 MTFR1Q15390 333 aa10.16□□□□□ -0.78
SH3D19-213ENST00000604922 VRTNQ9H8Y1 702 aa10.16□□□□□ -0.78
SH3D19-213ENST00000604922 CSB-PGBD3P0DP91 1061 aa10.15□□□□□ -0.78
SH3D19-213ENST00000604922 PGBD3Q8N328 593 aa10.15□□□□□ -0.78
SH3D19-213ENST00000604922 ZNF594Q96JF6 807 aaPredicted RBP10.15□□□□□ -0.78
SH3D19-213ENST00000604922 PLA2G4AP47712 749 aa10.14□□□□□ -0.79
SH3D19-213ENST00000604922 GPR161Q8N6U8 529 aaKnown RBP10.14□□□□□ -0.79
SH3D19-213ENST00000604922 CUEDC1Q9NWM3 386 aaPredicted RBP10.14□□□□□ -0.79
SH3D19-213ENST00000604922 KIAA1024Q9UPX6 916 aa10.14□□□□□ -0.79
SH3D19-213ENST00000604922 KCNMA1Q12791 1236 aa10.13□□□□□ -0.79
SH3D19-213ENST00000604922 DBN1Q16643 649 aa10.13□□□□□ -0.79
SH3D19-213ENST00000604922 C14orf37Q86TY3 774 aa10.13□□□□□ -0.79
SH3D19-213ENST00000604922 SIX5Q8N196 739 aa10.13□□□□□ -0.79
SH3D19-213ENST00000604922 AIDAQ96BJ3 306 aa10.13□□□□□ -0.79
SH3D19-213ENST00000604922 ZNF837Q96EG3 531 aaPredicted RBP10.13□□□□□ -0.79
SH3D19-213ENST00000604922 GPAMQ9HCL2 828 aa10.13□□□□□ -0.79
SH3D19-213ENST00000604922 CABP1Q9NZU7 370 aa10.13□□□□□ -0.79
SH3D19-213ENST00000604922 SCHIP1Q9P0W5 487 aaPredicted RBP10.13□□□□□ -0.79
SH3D19-213ENST00000604922 NBPF1Q3BBV0 1214 aa10.12□□□□□ -0.79
SH3D19-213ENST00000604922 XP32Q5T750 250 aa10.12□□□□□ -0.79
SH3D19-213ENST00000604922 COL25A1Q9BXS0 654 aaPredicted RBP10.12□□□□□ -0.79
SH3D19-213ENST00000604922 KRTAP4-8Q9BYQ9 185 aa10.12□□□□□ -0.79
SH3D19-213ENST00000604922 NUCKS1Q9H1E3 243 aaKnown RBP10.12□□□□□ -0.79
SH3D19-213ENST00000604922 IQSEC3Q9UPP2 1182 aaPredicted RBP10.12□□□□□ -0.79
SH3D19-213ENST00000604922 M0R2N6 131 aa10.11□□□□□ -0.79
SH3D19-213ENST00000604922 MSX1P28360 303 aa10.11□□□□□ -0.79
SH3D19-213ENST00000604922 KANK4Q5T7N3 995 aaPredicted RBP10.11□□□□□ -0.79
SH3D19-213ENST00000604922 TNS4Q8IZW8 715 aa10.11□□□□□ -0.79
SH3D19-213ENST00000604922 C1orf216Q8TAB5 229 aa10.11□□□□□ -0.79
SH3D19-213ENST00000604922 CNTNAP3BQ96NU0 1288 aa10.11□□□□□ -0.79
SH3D19-213ENST00000604922 TRERF1Q96PN7 1200 aa10.11□□□□□ -0.79
SH3D19-213ENST00000604922 CNTNAP3Q9BZ76 1288 aa10.11□□□□□ -0.79
SH3D19-213ENST00000604922 SEC13P55735 322 aa10.1□□□□□ -0.79
SH3D19-213ENST00000604922 LBRQ14739 615 aaKnown RBP10.1□□□□□ -0.79
SH3D19-213ENST00000604922 CFAP70Q5T0N1 1121 aa10.1□□□□□ -0.79
SH3D19-213ENST00000604922 FAM196BA6NMK8 535 aa10.09□□□□□ -0.79
SH3D19-213ENST00000604922 TATP17735 454 aaPredicted RBP10.09□□□□□ -0.79
SH3D19-213ENST00000604922 RFX1P22670 979 aa10.09□□□□□ -0.79
SH3D19-213ENST00000604922 EFHC2Q5JST6 749 aa10.09□□□□□ -0.79
SH3D19-213ENST00000604922 GTPBP3Q969Y2 492 aaKnown RBP10.09□□□□□ -0.79
SH3D19-213ENST00000604922 CCDC97Q96F63 343 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms