RNA–Protein interactions for RNA: ENST00000604724.5

LINC01235-201, Transcript of long intergenic non-protein coding RNA 1235, humanhuman

TSL 2 BASIC

Gene LINC01235, Length 2,328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01235-201ENST00000604724 RNMTO43148 476 aaKnown RBP13.66□□□□□ -0.22
LINC01235-201ENST00000604724 CCDC30Q5VVM6 783 aa13.66□□□□□ -0.22
LINC01235-201ENST00000604724 ATP10DQ9P241 1426 aa13.66□□□□□ -0.22
LINC01235-201ENST00000604724 EIF4A1P60842 406 aaKnown RBP13.65□□□□□ -0.22
LINC01235-201ENST00000604724 TEFQ10587 303 aa13.65□□□□□ -0.22
LINC01235-201ENST00000604724 SOS2Q07890 1332 aaPredicted RBP13.65□□□□□ -0.22
LINC01235-201ENST00000604724 SEC24BO95487 1268 aa13.65□□□□□ -0.22
LINC01235-201ENST00000604724 NUCB1Q02818 461 aa13.65□□□□□ -0.22
LINC01235-201ENST00000604724 FLIIQ13045 1269 aa13.65□□□□□ -0.22
LINC01235-201ENST00000604724 SLC4A10Q6U841 1118 aa13.65□□□□□ -0.22
LINC01235-201ENST00000604724 MEIS3Q99687 375 aa13.65□□□□□ -0.22
LINC01235-201ENST00000604724 ADAMTS7Q9UKP4 1686 aa13.65□□□□□ -0.22
LINC01235-201ENST00000604724 BTBD11A6QL63 1104 aa13.64□□□□□ -0.23
LINC01235-201ENST00000604724 LNPKQ9C0E8 428 aa13.64□□□□□ -0.23
LINC01235-201ENST00000604724 CPDO75976 1380 aa13.64□□□□□ -0.23
LINC01235-201ENST00000604724 SIPA1L3O60292 1781 aaPredicted RBP13.64□□□□□ -0.23
LINC01235-201ENST00000604724 ABCC6O95255 1503 aa13.64□□□□□ -0.23
LINC01235-201ENST00000604724 CSB-PGBD3P0DP91 1061 aa13.64□□□□□ -0.23
LINC01235-201ENST00000604724 HDGFL1Q5TGJ6 251 aa13.64□□□□□ -0.23
LINC01235-201ENST00000604724 CACNA1FO60840 1977 aa13.63□□□□□ -0.23
LINC01235-201ENST00000604724 FKBP5Q13451 457 aaPredicted RBP13.63□□□□□ -0.23
LINC01235-201ENST00000604724 RAPGEF4Q8WZA2 1011 aa13.63□□□□□ -0.23
LINC01235-201ENST00000604724 NOP58Q9Y2X3 529 aaKnown RBP13.63□□□□□ -0.23
LINC01235-201ENST00000604724 OVOS2A0A0G2JMS6 1433 aa13.63□□□□□ -0.23
LINC01235-201ENST00000604724 SOS1Q07889 1333 aaPredicted RBP13.63□□□□□ -0.23
LINC01235-201ENST00000604724 ABCA3Q99758 1704 aa13.62□□□□□ -0.23
LINC01235-201ENST00000604724 EIF2S2P20042 333 aaKnown RBP13.62□□□□□ -0.23
LINC01235-201ENST00000604724 CHD1LQ86WJ1 897 aa13.62□□□□□ -0.23
LINC01235-201ENST00000604724 PHAXQ9H814 394 aaKnown RBP13.62□□□□□ -0.23
LINC01235-201ENST00000604724 GCC1Q96CN9 775 aa13.62□□□□□ -0.23
LINC01235-201ENST00000604724 KDM6AO15550 1401 aaPredicted RBP13.62□□□□□ -0.23
LINC01235-201ENST00000604724 ANKRD45Q5TZF3 282 aa13.61□□□□□ -0.23
LINC01235-201ENST00000604724 SCN11AQ9UI33 1791 aa13.61□□□□□ -0.23
LINC01235-201ENST00000604724 TATP17735 454 aaPredicted RBP13.61□□□□□ -0.23
LINC01235-201ENST00000604724 CEP85Q6P2H3 762 aa13.61□□□□□ -0.23
LINC01235-201ENST00000604724 NHSL1Q5SYE7 1610 aa13.61□□□□□ -0.23
LINC01235-201ENST00000604724 CCT4P50991 539 aaKnown RBP13.6□□□□□ -0.23
LINC01235-201ENST00000604724 ANKRD44Q8N8A2 993 aa13.6□□□□□ -0.23
LINC01235-201ENST00000604724 ANP32EQ9BTT0 268 aa13.6□□□□□ -0.23
LINC01235-201ENST00000604724 PRDM11Q9NQV5 511 aa13.6□□□□□ -0.23
LINC01235-201ENST00000604724 CHPF2Q9P2E5 772 aa13.6□□□□□ -0.23
LINC01235-201ENST00000604724 N4BP2Q86UW6 1770 aaPredicted RBP13.6□□□□□ -0.23
LINC01235-201ENST00000604724 PRAMEF22A3QJZ6 481 aa13.59□□□□□ -0.23
LINC01235-201ENST00000604724 PHKG2P15735 406 aa13.59□□□□□ -0.23
LINC01235-201ENST00000604724 PKD1L3Q7Z443 1732 aa13.59□□□□□ -0.23
LINC01235-201ENST00000604724 ANXA1P04083 346 aa13.59□□□□□ -0.23
LINC01235-201ENST00000604724 ZBTB47Q9UFB7 747 aaPredicted RBP13.59□□□□□ -0.23
LINC01235-201ENST00000604724 HOXB7P09629 217 aa13.58□□□□□ -0.23
LINC01235-201ENST00000604724 CYP27B1O15528 508 aa13.58□□□□□ -0.24
LINC01235-201ENST00000604724 DCTPP1Q9H773 170 aa13.58□□□□□ -0.24
LINC01235-201ENST00000604724 SPG7Q9UQ90 795 aa13.58□□□□□ -0.24
LINC01235-201ENST00000604724 HEG1Q9ULI3 1381 aa13.58□□□□□ -0.24
LINC01235-201ENST00000604724 GIGYF1O75420 1035 aaPredicted RBP13.57□□□□□ -0.24
LINC01235-201ENST00000604724 RPAP2Q8IXW5 612 aaPredicted RBP13.57□□□□□ -0.24
LINC01235-201ENST00000604724 COL5A2P05997 1499 aaPredicted RBP13.57□□□□□ -0.24
LINC01235-201ENST00000604724 SLC39A6Q13433 755 aa13.57□□□□□ -0.24
LINC01235-201ENST00000604724 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.57□□□□□ -0.24
LINC01235-201ENST00000604724 WDR17Q8IZU2 1322 aa13.57□□□□□ -0.24
LINC01235-201ENST00000604724 PXDNLA1KZ92 1463 aa13.57□□□□□ -0.24
LINC01235-201ENST00000604724 IFNL2Q8IZJ0 200 aa13.56□□□□□ -0.24
LINC01235-201ENST00000604724 NFATC2IPQ8NCF5 419 aa13.56□□□□□ -0.24
LINC01235-201ENST00000604724 SLC52A2Q9HAB3 445 aa13.56□□□□□ -0.24
LINC01235-201ENST00000604724 C5P01031 1676 aa13.55□□□□□ -0.24
LINC01235-201ENST00000604724 PROSER3Q2NL68 480 aa13.55□□□□□ -0.24
LINC01235-201ENST00000604724 TOM1L2Q6ZVM7 507 aa13.55□□□□□ -0.24
LINC01235-201ENST00000604724 GNAI2P04899 355 aa13.54□□□□□ -0.24
LINC01235-201ENST00000604724 ZNF790Q6PG37 636 aa13.54□□□□□ -0.24
LINC01235-201ENST00000604724 MRC1P22897 1456 aa13.54□□□□□ -0.24
LINC01235-201ENST00000604724 PARP4Q9UKK3 1724 aaKnown RBP13.54□□□□□ -0.24
LINC01235-201ENST00000604724 PI4KAP2A4QPH2 592 aa13.53□□□□□ -0.24
LINC01235-201ENST00000604724 APBB1O00213 710 aa13.53□□□□□ -0.24
LINC01235-201ENST00000604724 SLC4A3P48751 1232 aa13.53□□□□□ -0.24
LINC01235-201ENST00000604724 PI4KAP1Q8N8J0 262 aa13.53□□□□□ -0.24
LINC01235-201ENST00000604724 DDRGK1Q96HY6 314 aa13.53□□□□□ -0.24
LINC01235-201ENST00000604724 USP44Q9H0E7 712 aa13.53□□□□□ -0.24
LINC01235-201ENST00000604724 ADCY9O60503 1353 aa13.53□□□□□ -0.24
LINC01235-201ENST00000604724 PLEKHG2Q9H7P9 1386 aa13.53□□□□□ -0.24
LINC01235-201ENST00000604724 C16orf71Q8IYS4 520 aaPredicted RBP13.53□□□□□ -0.24
LINC01235-201ENST00000604724 DBF4Q9UBU7 674 aaPredicted RBP13.53□□□□□ -0.24
LINC01235-201ENST00000604724 SMARCA5O60264 1052 aaPredicted RBP13.52□□□□□ -0.24
LINC01235-201ENST00000604724 DCAF5Q96JK2 942 aa13.52□□□□□ -0.24
LINC01235-201ENST00000604724 STRN4Q9NRL3 753 aa13.52□□□□□ -0.24
LINC01235-201ENST00000604724 ROBO1Q9Y6N7 1651 aa13.52□□□□□ -0.25
LINC01235-201ENST00000604724 PNMA6EA0A0J9YXQ4 647 aa13.52□□□□□ -0.25
LINC01235-201ENST00000604724 GNAI3P08754 354 aa13.52□□□□□ -0.25
LINC01235-201ENST00000604724 BMP2KLQ5H9B9 411 aa13.52□□□□□ -0.25
LINC01235-201ENST00000604724 LARP1Q6PKG0 1096 aaKnown RBP13.52□□□□□ -0.25
LINC01235-201ENST00000604724 OTUD7AQ8TE49 926 aaPredicted RBP13.52□□□□□ -0.25
LINC01235-201ENST00000604724 LRRFIP2Q9Y608 721 aaKnown RBP13.52□□□□□ -0.25
LINC01235-201ENST00000604724 DNAAF4Q8WXU2 420 aa13.51□□□□□ -0.25
LINC01235-201ENST00000604724 SRCIN1Q9C0H9 1055 aa13.51□□□□□ -0.25
LINC01235-201ENST00000604724 BEND3Q5T5X7 828 aa13.51□□□□□ -0.25
LINC01235-201ENST00000604724 PLEKHM2Q8IWE5 1019 aa13.51□□□□□ -0.25
LINC01235-201ENST00000604724 ZNF496Q96IT1 587 aaPredicted RBP13.51□□□□□ -0.25
LINC01235-201ENST00000604724 TBC1D32Q96NH3 1257 aa13.51□□□□□ -0.25
LINC01235-201ENST00000604724 SHANK3Q9BYB0 1731 aa13.51□□□□□ -0.25
LINC01235-201ENST00000604724 HMMRO75330 724 aa13.5□□□□□ -0.25
LINC01235-201ENST00000604724 PDIA6Q15084 440 aa13.5□□□□□ -0.25
LINC01235-201ENST00000604724 CHMP4AQ9BY43 222 aa13.5□□□□□ -0.25
LINC01235-201ENST00000604724 UBTFL1P0CB47 393 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms