RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 CHRNA2Q15822 529 aa18.89■□□□□ 0.61
CCDC12-211ENST00000604367 BTBD11A6QL63 1104 aa18.88■□□□□ 0.61
CCDC12-211ENST00000604367 ZNF335Q9H4Z2 1342 aaPredicted RBP18.88■□□□□ 0.61
CCDC12-211ENST00000604367 NCAPD2Q15021 1401 aa18.87■□□□□ 0.61
CCDC12-211ENST00000604367 EIF4A1P60842 406 aaKnown RBP18.87■□□□□ 0.61
CCDC12-211ENST00000604367 TNS3Q68CZ2 1445 aa18.87■□□□□ 0.61
CCDC12-211ENST00000604367 RNMTO43148 476 aaKnown RBP18.86■□□□□ 0.61
CCDC12-211ENST00000604367 CSB-PGBD3P0DP91 1061 aa18.86■□□□□ 0.61
CCDC12-211ENST00000604367 CCT4P50991 539 aaKnown RBP18.86■□□□□ 0.61
CCDC12-211ENST00000604367 CEP85Q6P2H3 762 aa18.86■□□□□ 0.61
CCDC12-211ENST00000604367 FAM208AQ9UK61 1670 aaKnown RBP18.86■□□□□ 0.61
CCDC12-211ENST00000604367 BRINP3Q76B58 766 aa18.86■□□□□ 0.61
CCDC12-211ENST00000604367 ANKRD44Q8N8A2 993 aa18.86■□□□□ 0.61
CCDC12-211ENST00000604367 UPF2Q9HAU5 1272 aaKnown RBP18.86■□□□□ 0.61
CCDC12-211ENST00000604367 ATP10DQ9P241 1426 aa18.86■□□□□ 0.61
CCDC12-211ENST00000604367 XIRP1Q702N8 1843 aaKnown RBP18.86■□□□□ 0.61
CCDC12-211ENST00000604367 LMO7Q8WWI1 1683 aa18.86■□□□□ 0.61
CCDC12-211ENST00000604367 STRCQ7RTU9 1775 aa18.86■□□□□ 0.61
CCDC12-211ENST00000604367 SPATA31A3Q5VYP0 1347 aa18.86■□□□□ 0.61
CCDC12-211ENST00000604367 NBR1Q14596 966 aa18.85■□□□□ 0.61
CCDC12-211ENST00000604367 SOS1Q07889 1333 aaPredicted RBP18.85■□□□□ 0.61
CCDC12-211ENST00000604367 RPAP2Q8IXW5 612 aaPredicted RBP18.85■□□□□ 0.61
CCDC12-211ENST00000604367 RAPGEF4Q8WZA2 1011 aa18.85■□□□□ 0.61
CCDC12-211ENST00000604367 PHAXQ9H814 394 aaKnown RBP18.85■□□□□ 0.61
CCDC12-211ENST00000604367 DCTPP1Q9H773 170 aa18.84■□□□□ 0.61
CCDC12-211ENST00000604367 APBB1O00213 710 aa18.83■□□□□ 0.6
CCDC12-211ENST00000604367 CAMTA1Q9Y6Y1 1673 aa18.82■□□□□ 0.6
CCDC12-211ENST00000604367 MFAP1P55081 439 aaKnown RBP18.82■□□□□ 0.6
CCDC12-211ENST00000604367 SLAIN2Q9P270 581 aa18.81■□□□□ 0.6
CCDC12-211ENST00000604367 CHPF2Q9P2E5 772 aa18.81■□□□□ 0.6
CCDC12-211ENST00000604367 KDM3BQ7LBC6 1761 aa18.81■□□□□ 0.6
CCDC12-211ENST00000604367 ANXA1P04083 346 aa18.81■□□□□ 0.6
CCDC12-211ENST00000604367 CACNA1FO60840 1977 aa18.8■□□□□ 0.6
CCDC12-211ENST00000604367 TATP17735 454 aaPredicted RBP18.8■□□□□ 0.6
CCDC12-211ENST00000604367 TBC1D32Q96NH3 1257 aa18.8■□□□□ 0.6
CCDC12-211ENST00000604367 GNAI2P04899 355 aa18.79■□□□□ 0.6
CCDC12-211ENST00000604367 BMP2KLQ5H9B9 411 aa18.79■□□□□ 0.6
CCDC12-211ENST00000604367 C16orf71Q8IYS4 520 aaPredicted RBP18.79■□□□□ 0.6
CCDC12-211ENST00000604367 COL18A1P39060 1754 aa18.78■□□□□ 0.6
CCDC12-211ENST00000604367 HOXB7P09629 217 aa18.78■□□□□ 0.6
CCDC12-211ENST00000604367 MEGF6O75095 1541 aa18.77■□□□□ 0.6
CCDC12-211ENST00000604367 PRAMEF22A3QJZ6 481 aa18.77■□□□□ 0.6
CCDC12-211ENST00000604367 SMARCA5O60264 1052 aaPredicted RBP18.77■□□□□ 0.6
CCDC12-211ENST00000604367 HMMRO75330 724 aa18.76■□□□□ 0.59
CCDC12-211ENST00000604367 GNAI3P08754 354 aa18.76■□□□□ 0.59
CCDC12-211ENST00000604367 SPG7Q9UQ90 795 aa18.76■□□□□ 0.59
CCDC12-211ENST00000604367 GIGYF1O75420 1035 aaPredicted RBP18.75■□□□□ 0.59
CCDC12-211ENST00000604367 PHKG2P15735 406 aa18.75■□□□□ 0.59
CCDC12-211ENST00000604367 PLEKHM2Q8IWE5 1019 aa18.75■□□□□ 0.59
CCDC12-211ENST00000604367 PRDM11Q9NQV5 511 aa18.75■□□□□ 0.59
CCDC12-211ENST00000604367 OVOS2A0A0G2JMS6 1433 aa18.75■□□□□ 0.59
CCDC12-211ENST00000604367 SLC39A6Q13433 755 aa18.75■□□□□ 0.59
CCDC12-211ENST00000604367 OTUD7AQ8TE49 926 aaPredicted RBP18.75■□□□□ 0.59
CCDC12-211ENST00000604367 C22orf23Q9BZE7 217 aa18.75■□□□□ 0.59
CCDC12-211ENST00000604367 PI4KAP2A4QPH2 592 aa18.74■□□□□ 0.59
CCDC12-211ENST00000604367 PI4KAP1Q8N8J0 262 aa18.74■□□□□ 0.59
CCDC12-211ENST00000604367 NFATC2IPQ8NCF5 419 aa18.74■□□□□ 0.59
CCDC12-211ENST00000604367 USP44Q9H0E7 712 aa18.74■□□□□ 0.59
CCDC12-211ENST00000604367 LRRFIP2Q9Y608 721 aaKnown RBP18.74■□□□□ 0.59
CCDC12-211ENST00000604367 CRYBG1Q9Y4K1 1723 aa18.74■□□□□ 0.59
CCDC12-211ENST00000604367 CPDO75976 1380 aa18.74■□□□□ 0.59
CCDC12-211ENST00000604367 SOS2Q07890 1332 aaPredicted RBP18.73■□□□□ 0.59
CCDC12-211ENST00000604367 CHMP4AQ9BY43 222 aa18.73■□□□□ 0.59
CCDC12-211ENST00000604367 DBF4Q9UBU7 674 aaPredicted RBP18.73■□□□□ 0.59
CCDC12-211ENST00000604367 EXOC6BQ9Y2D4 811 aa18.73■□□□□ 0.59
CCDC12-211ENST00000604367 PNMA6EA0A0J9YXQ4 647 aa18.73■□□□□ 0.59
CCDC12-211ENST00000604367 IFNL2Q8IZJ0 200 aa18.73■□□□□ 0.59
CCDC12-211ENST00000604367 SRCIN1Q9C0H9 1055 aa18.73■□□□□ 0.59
CCDC12-211ENST00000604367 KDM6AO15550 1401 aaPredicted RBP18.73■□□□□ 0.59
CCDC12-211ENST00000604367 UBTFL1P0CB47 393 aaPredicted RBP18.72■□□□□ 0.59
CCDC12-211ENST00000604367 GSPT1P15170 499 aaKnown RBP18.72■□□□□ 0.59
CCDC12-211ENST00000604367 PROSER3Q2NL68 480 aa18.72■□□□□ 0.59
CCDC12-211ENST00000604367 SLC52A2Q9HAB3 445 aa18.72■□□□□ 0.59
CCDC12-211ENST00000604367 PXDNLA1KZ92 1463 aa18.72■□□□□ 0.59
CCDC12-211ENST00000604367 CYP27B1O15528 508 aa18.71■□□□□ 0.59
CCDC12-211ENST00000604367 ZNF790Q6PG37 636 aa18.71■□□□□ 0.59
CCDC12-211ENST00000604367 DNAAF4Q8WXU2 420 aa18.71■□□□□ 0.59
CCDC12-211ENST00000604367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.71■□□□□ 0.59
CCDC12-211ENST00000604367 SIPA1L3O60292 1781 aaPredicted RBP18.7■□□□□ 0.58
CCDC12-211ENST00000604367 BECN1Q14457 450 aa18.7■□□□□ 0.58
CCDC12-211ENST00000604367 TOM1L2Q6ZVM7 507 aa18.7■□□□□ 0.58
CCDC12-211ENST00000604367 HEG1Q9ULI3 1381 aa18.7■□□□□ 0.58
CCDC12-211ENST00000604367 TBC1D9Q6ZT07 1266 aa18.7■□□□□ 0.58
CCDC12-211ENST00000604367 ATP8B2P98198 1209 aa18.69■□□□□ 0.58
CCDC12-211ENST00000604367 BEND3Q5T5X7 828 aa18.69■□□□□ 0.58
CCDC12-211ENST00000604367 TTC22Q5TAA0 569 aa18.69■□□□□ 0.58
CCDC12-211ENST00000604367 NBPF7P0C2Y1 421 aaPredicted RBP18.69■□□□□ 0.58
CCDC12-211ENST00000604367 ADCY9O60503 1353 aa18.68■□□□□ 0.58
CCDC12-211ENST00000604367 ADAMTS7Q9UKP4 1686 aa18.68■□□□□ 0.58
CCDC12-211ENST00000604367 SCN11AQ9UI33 1791 aa18.68■□□□□ 0.58
CCDC12-211ENST00000604367 MAP3K2Q9Y2U5 619 aa18.68■□□□□ 0.58
CCDC12-211ENST00000604367 AIMP1Q12904 312 aaKnown RBP18.67■□□□□ 0.58
CCDC12-211ENST00000604367 DCAF5Q96JK2 942 aa18.67■□□□□ 0.58
CCDC12-211ENST00000604367 ABCC6O95255 1503 aa18.67■□□□□ 0.58
CCDC12-211ENST00000604367 WDR17Q8IZU2 1322 aa18.67■□□□□ 0.58
CCDC12-211ENST00000604367 N4BP2Q86UW6 1770 aaPredicted RBP18.67■□□□□ 0.58
CCDC12-211ENST00000604367 STRN4Q9NRL3 753 aa18.66■□□□□ 0.58
CCDC12-211ENST00000604367 CDC45O75419 566 aa18.66■□□□□ 0.58
CCDC12-211ENST00000604367 RTL5Q5HYW3 569 aaPredicted RBP18.66■□□□□ 0.58
CCDC12-211ENST00000604367 ZNF496Q96IT1 587 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms