RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 HEG1Q9ULI3 1381 aa15.71■□□□□ 0.11
NEDD8-MDP1-203ENST00000604306 ITGB4P16144 1822 aa15.71■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 SPATA31A6Q5VVP1 1343 aa15.7■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 NKX1-1Q15270 411 aaPredicted RBP15.7■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 FRAT1Q92837 279 aaPredicted RBP15.7■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 CDCA7Q9BWT1 371 aaPredicted RBP15.7■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 API5Q9BZZ5 524 aaKnown RBP15.7■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 THRAP3Q9Y2W1 955 aaKnown RBP15.7■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 TOGARAM1Q9Y4F4 1720 aa15.7■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 TRIM27P14373 513 aa15.69■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 MVPQ14764 893 aaKnown RBP15.69■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 FTSJ3Q8IY81 847 aaKnown RBP15.69■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 BTG4Q9NY30 223 aa15.69■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 PXDNLA1KZ92 1463 aa15.69■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 ABCC4O15439 1325 aa15.68■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 C5P01031 1676 aa15.68■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 LARP1Q6PKG0 1096 aaKnown RBP15.68■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 ZCRB1Q8TBF4 217 aaKnown RBP15.68■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 BCL2L13Q9BXK5 485 aa15.68■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 SLC52A2Q9HAB3 445 aa15.68■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 LGR6Q9HBX8 967 aa15.68■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 NOB1Q9ULX3 412 aaKnown RBP15.68■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 DDX19BQ9UMR2 479 aa15.68■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 CYP27B1O15528 508 aa15.67■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 EIF4A1P60842 406 aaKnown RBP15.67■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 PIP4K2BP78356 416 aa15.67■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 CCDC30Q5VVM6 783 aa15.67■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 MPRIPQ6WCQ1 1025 aa15.67■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 TNS2Q63HR2 1409 aa15.67■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 GLI3P10071 1580 aa15.66■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 BTBD11A6QL63 1104 aa15.66■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 ERVV-2B6SEH9 535 aa15.66■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 B4GALNT3Q6L9W6 998 aa15.66■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 CLUAP1Q96AJ1 413 aa15.66■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 RLBP1P12271 317 aa15.65■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 PANK1Q8TE04 598 aa15.65■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 STK31Q9BXU1 1019 aa15.65■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 STRN4Q9NRL3 753 aa15.65■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 RGS12O14924 1447 aa15.65■□□□□ 0.1
NEDD8-MDP1-203ENST00000604306 CENPQQ7L2Z9 268 aaPredicted RBP15.64■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 COG6Q9Y2V7 657 aa15.64■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 CICQ96RK0 1608 aaPredicted RBP15.64■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 ELL2O00472 640 aaPredicted RBP15.63■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 MIS18AQ9NYP9 233 aa15.63■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 KDM2BQ8NHM5 1336 aa15.63■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 KRT24Q2M2I5 525 aa15.62■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 DOT1LQ8TEK3 1739 aa15.62■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 SPATA31A1Q5TZJ5 1347 aa15.62■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 INTS3Q68E01 1043 aaKnown RBP15.61■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 ZNF790Q6PG37 636 aa15.61■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 BARGINQ6ZT62 677 aa15.61■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 IBTKQ9P2D0 1353 aaPredicted RBP15.61■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 SPATA31A5Q5VU36 1347 aa15.6■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 SPATA31A7Q8IWB4 1347 aa15.6■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 ZNF831Q5JPB2 1677 aa15.6■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 THSD7AQ9UPZ6 1657 aa15.6■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 KCPQ6ZWJ8 1503 aa15.59■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 GIGYF1O75420 1035 aaPredicted RBP15.59■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 SLC4A2P04920 1241 aa15.59■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 HDGFL1Q5TGJ6 251 aa15.59■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 TMEM57Q8N5G2 664 aa15.59■□□□□ 0.09
NEDD8-MDP1-203ENST00000604306 CABP4P57796 275 aa15.58■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 ITPRIPQ8IWB1 547 aa15.58■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 FNBP4Q8N3X1 1017 aaPredicted RBP15.58■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 ZBTB40Q9NUA8 1239 aa15.58■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 ERBB4Q15303 1308 aa15.58■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 BCL9LQ86UU0 1499 aa15.58■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 ADAMTS2O95450 1211 aa15.57■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 UNC5CLQ8IV45 518 aa15.57■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 TTC5Q8N0Z6 440 aa15.57■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 NFATC2IPQ8NCF5 419 aa15.57■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 DBF4Q9UBU7 674 aaPredicted RBP15.57■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 TNNQ9UQP3 1299 aa15.57■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 CCT4P50991 539 aaKnown RBP15.56■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 FLIIQ13045 1269 aa15.56■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 VPS72Q15906 364 aa15.56■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 FMNL2Q96PY5 1086 aa15.56■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 ATP10DQ9P241 1426 aa15.56■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 EXOC5O00471 708 aa15.55■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 ZBTB7BO15156 539 aaPredicted RBP15.55■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 HDAC1Q13547 482 aaPredicted RBP15.55■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 RWDD1Q9H446 243 aaPredicted RBP15.55■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 KCNQ3O43525 872 aa15.54■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 SNRPA1P09661 255 aaKnown RBP15.54■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 HYPKQ9NX55 129 aa15.54■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 ARFGEF2Q9Y6D5 1785 aa15.54■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 BCL9O00512 1426 aa15.53■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 NUTM2BA6NNL0 878 aaPredicted RBP15.53■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 NUTM2EB1AL46 878 aaPredicted RBP15.53■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 NUTM2AQ8IVF1 878 aaPredicted RBP15.53■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 DDX21Q9NR30 783 aaKnown RBP eCLIP15.53■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 NUP188Q5SRE5 1749 aa15.53■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 KAT6BQ8WYB5 2073 aa15.52■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 VSIG10Q8N0Z9 540 aa15.52■□□□□ 0.08
NEDD8-MDP1-203ENST00000604306 TCERG1O14776 1098 aaKnown RBP15.51■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 FKBP5Q13451 457 aaPredicted RBP15.51■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 DDB1Q16531 1140 aa15.51■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 DDX54Q8TDD1 881 aaKnown RBP15.51■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 ZNF496Q96IT1 587 aaPredicted RBP15.51■□□□□ 0.07
NEDD8-MDP1-203ENST00000604306 TMOD3Q9NYL9 352 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms