RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 FCHSD2O94868 740 aa16.5■□□□□ 0.23
PDLIM1P1-201ENST00000604187 DPEP1P16444 411 aa16.5■□□□□ 0.23
PDLIM1P1-201ENST00000604187 C16orf71Q8IYS4 520 aaPredicted RBP16.5■□□□□ 0.23
PDLIM1P1-201ENST00000604187 CNKSR2Q8WXI2 1034 aa16.5■□□□□ 0.23
PDLIM1P1-201ENST00000604187 KLRG1Q96E93 195 aa16.5■□□□□ 0.23
PDLIM1P1-201ENST00000604187 C9orf131Q5VYM1 1079 aa16.49■□□□□ 0.23
PDLIM1P1-201ENST00000604187 NLGN1Q8N2Q7 840 aa16.49■□□□□ 0.23
PDLIM1P1-201ENST00000604187 EMILIN1Q9Y6C2 1016 aa16.49■□□□□ 0.23
PDLIM1P1-201ENST00000604187 TAF1LQ8IZX4 1826 aa16.49■□□□□ 0.23
PDLIM1P1-201ENST00000604187 TONSLQ96HA7 1378 aa16.49■□□□□ 0.23
PDLIM1P1-201ENST00000604187 UBR3Q6ZT12 1888 aa16.48■□□□□ 0.23
PDLIM1P1-201ENST00000604187 TMF1P82094 1093 aa16.48■□□□□ 0.23
PDLIM1P1-201ENST00000604187 JMYQ8N9B5 988 aa16.48■□□□□ 0.23
PDLIM1P1-201ENST00000604187 CCDC87Q9NVE4 849 aa16.48■□□□□ 0.23
PDLIM1P1-201ENST00000604187 KCNA4P22459 653 aa16.47■□□□□ 0.23
PDLIM1P1-201ENST00000604187 TRAPPC3LQ5T215 181 aa16.47■□□□□ 0.23
PDLIM1P1-201ENST00000604187 ATG3Q9NT62 314 aa16.47■□□□□ 0.23
PDLIM1P1-201ENST00000604187 RTCBQ9Y3I0 505 aaKnown RBP16.47■□□□□ 0.23
PDLIM1P1-201ENST00000604187 PLEKHG2Q9H7P9 1386 aa16.47■□□□□ 0.23
PDLIM1P1-201ENST00000604187 NCAPD2Q15021 1401 aa16.46■□□□□ 0.23
PDLIM1P1-201ENST00000604187 PPM1GO15355 546 aaPredicted RBP16.46■□□□□ 0.23
PDLIM1P1-201ENST00000604187 SLC24A1O60721 1099 aa16.46■□□□□ 0.23
PDLIM1P1-201ENST00000604187 FSTL1Q12841 308 aa16.46■□□□□ 0.23
PDLIM1P1-201ENST00000604187 PHKG2P15735 406 aa16.45■□□□□ 0.22
PDLIM1P1-201ENST00000604187 TNS4Q8IZW8 715 aa16.45■□□□□ 0.22
PDLIM1P1-201ENST00000604187 PARP3Q9Y6F1 533 aa16.45■□□□□ 0.22
PDLIM1P1-201ENST00000604187 KDRP35968 1356 aa16.45■□□□□ 0.22
PDLIM1P1-201ENST00000604187 GYS1P13807 737 aa16.44■□□□□ 0.22
PDLIM1P1-201ENST00000604187 ARHGEF1Q92888 912 aaKnown RBP16.44■□□□□ 0.22
PDLIM1P1-201ENST00000604187 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.44■□□□□ 0.22
PDLIM1P1-201ENST00000604187 KDM2BQ8NHM5 1336 aa16.44■□□□□ 0.22
PDLIM1P1-201ENST00000604187 PKD1L3Q7Z443 1732 aa16.43■□□□□ 0.22
PDLIM1P1-201ENST00000604187 IFNL2Q8IZJ0 200 aa16.43■□□□□ 0.22
PDLIM1P1-201ENST00000604187 SLC4A9Q96Q91 983 aa16.43■□□□□ 0.22
PDLIM1P1-201ENST00000604187 EYA1Q99502 592 aa16.43■□□□□ 0.22
PDLIM1P1-201ENST00000604187 RBM42Q9BTD8 480 aaKnown RBP16.43■□□□□ 0.22
PDLIM1P1-201ENST00000604187 RNF181Q9P0P0 153 aa16.43■□□□□ 0.22
PDLIM1P1-201ENST00000604187 KCPQ6ZWJ8 1503 aa16.43■□□□□ 0.22
PDLIM1P1-201ENST00000604187 MAP2P11137 1827 aaKnown RBP16.42■□□□□ 0.22
PDLIM1P1-201ENST00000604187 KIAA1551Q9HCM1 1747 aa16.42■□□□□ 0.22
PDLIM1P1-201ENST00000604187 KCNA3P22001 575 aa16.42■□□□□ 0.22
PDLIM1P1-201ENST00000604187 RFC4P35249 363 aa16.42■□□□□ 0.22
PDLIM1P1-201ENST00000604187 PCNTO95613 3336 aa16.41■□□□□ 0.22
PDLIM1P1-201ENST00000604187 DALRD3Q5D0E6 543 aaKnown RBP16.41■□□□□ 0.22
PDLIM1P1-201ENST00000604187 DCAF5Q96JK2 942 aa16.41■□□□□ 0.22
PDLIM1P1-201ENST00000604187 PIM2Q9P1W9 311 aa16.41■□□□□ 0.22
PDLIM1P1-201ENST00000604187 WDR90Q96KV7 1748 aa16.41■□□□□ 0.22
PDLIM1P1-201ENST00000604187 CNTNAP4Q9C0A0 1308 aa16.41■□□□□ 0.22
PDLIM1P1-201ENST00000604187 PRELPP51888 382 aa16.4■□□□□ 0.22
PDLIM1P1-201ENST00000604187 RRAGCQ9HB90 399 aa16.4■□□□□ 0.22
PDLIM1P1-201ENST00000604187 WASHC2AQ641Q2 1341 aa16.4■□□□□ 0.22
PDLIM1P1-201ENST00000604187 RPS6KA4O75676 772 aa16.39■□□□□ 0.21
PDLIM1P1-201ENST00000604187 RC3H1Q5TC82 1133 aaKnown RBP16.39■□□□□ 0.21
PDLIM1P1-201ENST00000604187 SMC1BQ8NDV3 1235 aa16.39■□□□□ 0.21
PDLIM1P1-201ENST00000604187 CARD14Q9BXL6 1004 aa16.39■□□□□ 0.21
PDLIM1P1-201ENST00000604187 ITGB4P16144 1822 aa16.39■□□□□ 0.21
PDLIM1P1-201ENST00000604187 C4AP0C0L4 1744 aa16.38■□□□□ 0.21
PDLIM1P1-201ENST00000604187 KIF13BQ9NQT8 1826 aa16.38■□□□□ 0.21
PDLIM1P1-201ENST00000604187 N4BP2Q86UW6 1770 aaPredicted RBP16.37■□□□□ 0.21
PDLIM1P1-201ENST00000604187 CHRNA5P30532 468 aa16.37■□□□□ 0.21
PDLIM1P1-201ENST00000604187 DDR1Q08345 913 aa16.37■□□□□ 0.21
PDLIM1P1-201ENST00000604187 SRP68Q9UHB9 627 aaKnown RBP16.37■□□□□ 0.21
PDLIM1P1-201ENST00000604187 ERVV-2B6SEH9 535 aa16.36■□□□□ 0.21
PDLIM1P1-201ENST00000604187 POTEDQ86YR6 584 aa16.36■□□□□ 0.21
PDLIM1P1-201ENST00000604187 FKBP8Q14318 412 aa16.35■□□□□ 0.21
PDLIM1P1-201ENST00000604187 CDCA8Q53HL2 280 aa16.35■□□□□ 0.21
PDLIM1P1-201ENST00000604187 HSPA1AP0DMV8 641 aaKnown RBP16.34■□□□□ 0.21
PDLIM1P1-201ENST00000604187 HSPA1BP0DMV9 641 aaKnown RBP16.34■□□□□ 0.21
PDLIM1P1-201ENST00000604187 EIF4A2Q14240 407 aaKnown RBP16.34■□□□□ 0.21
PDLIM1P1-201ENST00000604187 USP42Q9H9J4 1324 aaKnown RBP16.34■□□□□ 0.21
PDLIM1P1-201ENST00000604187 PTCD1O75127 700 aaKnown RBP16.33■□□□□ 0.2
PDLIM1P1-201ENST00000604187 HSP90AB1P08238 724 aaKnown RBP16.33■□□□□ 0.2
PDLIM1P1-201ENST00000604187 CRKLP46109 303 aaKnown RBP16.33■□□□□ 0.2
PDLIM1P1-201ENST00000604187 RASSF7Q02833 373 aa16.33■□□□□ 0.2
PDLIM1P1-201ENST00000604187 POLKQ9UBT6 870 aa16.33■□□□□ 0.2
PDLIM1P1-201ENST00000604187 KDM6AO15550 1401 aaPredicted RBP16.32■□□□□ 0.2
PDLIM1P1-201ENST00000604187 CABP4P57796 275 aa16.32■□□□□ 0.2
PDLIM1P1-201ENST00000604187 KIF20BQ96Q89 1820 aa16.31■□□□□ 0.2
PDLIM1P1-201ENST00000604187 ZC3H4Q9UPT8 1303 aaKnown RBP16.31■□□□□ 0.2
PDLIM1P1-201ENST00000604187 POLRMTO00411 1230 aaKnown RBP16.31■□□□□ 0.2
PDLIM1P1-201ENST00000604187 ZNF530Q6P9A1 599 aaPredicted RBP16.31■□□□□ 0.2
PDLIM1P1-201ENST00000604187 TNNT2P45379 298 aaPredicted RBP16.3■□□□□ 0.2
PDLIM1P1-201ENST00000604187 VEGFAP15692 232 aaPredicted RBP16.29■□□□□ 0.2
PDLIM1P1-201ENST00000604187 PLEKHO1Q53GL0 409 aaPredicted RBP16.29■□□□□ 0.2
PDLIM1P1-201ENST00000604187 GLTPD2A6NH11 291 aa16.28■□□□□ 0.2
PDLIM1P1-201ENST00000604187 LMNB1P20700 586 aa16.28■□□□□ 0.2
PDLIM1P1-201ENST00000604187 ANKRD26Q9UPS8 1709 aa16.28■□□□□ 0.2
PDLIM1P1-201ENST00000604187 TM4SF1P30408 202 aa16.27■□□□□ 0.2
PDLIM1P1-201ENST00000604187 MTHFSP49914 203 aa16.27■□□□□ 0.2
PDLIM1P1-201ENST00000604187 USPL1Q5W0Q7 1092 aa16.27■□□□□ 0.2
PDLIM1P1-201ENST00000604187 ZNF831Q5JPB2 1677 aa16.27■□□□□ 0.19
PDLIM1P1-201ENST00000604187 TNRC6CQ9HCJ0 1690 aaKnown RBP16.27■□□□□ 0.19
PDLIM1P1-201ENST00000604187 INTS5Q6P9B9 1019 aaKnown RBP16.26■□□□□ 0.19
PDLIM1P1-201ENST00000604187 BRCA1P38398 1863 aaKnown RBP16.26■□□□□ 0.19
PDLIM1P1-201ENST00000604187 COL5A3P25940 1745 aaPredicted RBP16.25■□□□□ 0.19
PDLIM1P1-201ENST00000604187 ZPR1O75312 459 aa16.25■□□□□ 0.19
PDLIM1P1-201ENST00000604187 AMOTQ4VCS5 1084 aa16.25■□□□□ 0.19
PDLIM1P1-201ENST00000604187 C1orf141Q5JVX7 400 aa16.25■□□□□ 0.19
PDLIM1P1-201ENST00000604187 NFATC2IPQ8NCF5 419 aa16.25■□□□□ 0.19
PDLIM1P1-201ENST00000604187 ARFGEF1Q9Y6D6 1849 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms