RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 KDRP35968 1356 aa23.32■■□□□ 1.32
CCDC12-210ENST00000604181 TRIM26Q12899 539 aaPredicted RBP23.32■■□□□ 1.32
CCDC12-210ENST00000604181 GPBP1L1Q9HC44 474 aaPredicted RBP23.31■■□□□ 1.32
CCDC12-210ENST00000604181 KIAA1551Q9HCM1 1747 aa23.3■■□□□ 1.32
CCDC12-210ENST00000604181 POLR3GLQ9BT43 218 aa23.3■■□□□ 1.32
CCDC12-210ENST00000604181 MMP10P09238 476 aa23.29■■□□□ 1.32
CCDC12-210ENST00000604181 PXDNLA1KZ92 1463 aa23.28■■□□□ 1.32
CCDC12-210ENST00000604181 KIF13BQ9NQT8 1826 aa23.27■■□□□ 1.32
CCDC12-210ENST00000604181 KDM6AO15550 1401 aaPredicted RBP23.26■■□□□ 1.31
CCDC12-210ENST00000604181 N4BP2Q86UW6 1770 aaPredicted RBP23.26■■□□□ 1.31
CCDC12-210ENST00000604181 CICQ96RK0 1608 aaPredicted RBP23.26■■□□□ 1.31
CCDC12-210ENST00000604181 MYH14Q7Z406 1995 aaKnown RBP23.25■■□□□ 1.31
CCDC12-210ENST00000604181 COL5A3P25940 1745 aaPredicted RBP23.25■■□□□ 1.31
CCDC12-210ENST00000604181 RBM42Q9BTD8 480 aaKnown RBP23.24■■□□□ 1.31
CCDC12-210ENST00000604181 ARHGEF1Q92888 912 aaKnown RBP23.23■■□□□ 1.31
CCDC12-210ENST00000604181 ZNF831Q5JPB2 1677 aa23.22■■□□□ 1.31
CCDC12-210ENST00000604181 ERVV-2B6SEH9 535 aa23.22■■□□□ 1.31
CCDC12-210ENST00000604181 KIF3CO14782 793 aa23.22■■□□□ 1.31
CCDC12-210ENST00000604181 AEBP1Q8IUX7 1158 aa23.22■■□□□ 1.31
CCDC12-210ENST00000604181 RTCBQ9Y3I0 505 aaKnown RBP23.22■■□□□ 1.31
CCDC12-210ENST00000604181 C10orf71Q711Q0 1435 aa23.22■■□□□ 1.31
CCDC12-210ENST00000604181 A0A0G2JLW4 131 aa23.21■■□□□ 1.31
CCDC12-210ENST00000604181 GYS1P13807 737 aa23.21■■□□□ 1.31
CCDC12-210ENST00000604181 HSPA6P17066 643 aa23.21■■□□□ 1.31
CCDC12-210ENST00000604181 TRAPPC3LQ5T215 181 aa23.21■■□□□ 1.31
CCDC12-210ENST00000604181 PANK3Q9H999 370 aa23.21■■□□□ 1.31
CCDC12-210ENST00000604181 TIMELESSQ9UNS1 1208 aa23.21■■□□□ 1.31
CCDC12-210ENST00000604181 PLEKHG2Q9H7P9 1386 aa23.21■■□□□ 1.31
CCDC12-210ENST00000604181 ZNF530Q6P9A1 599 aaPredicted RBP23.2■■□□□ 1.3
CCDC12-210ENST00000604181 DCAF5Q96JK2 942 aa23.2■■□□□ 1.3
CCDC12-210ENST00000604181 C4AP0C0L4 1744 aa23.19■■□□□ 1.3
CCDC12-210ENST00000604181 CNTNAP4Q9C0A0 1308 aa23.19■■□□□ 1.3
CCDC12-210ENST00000604181 RC3H1Q5TC82 1133 aaKnown RBP23.19■■□□□ 1.3
CCDC12-210ENST00000604181 HSPA5P11021 654 aaKnown RBP23.18■■□□□ 1.3
CCDC12-210ENST00000604181 PLEKHO1Q53GL0 409 aaPredicted RBP23.18■■□□□ 1.3
CCDC12-210ENST00000604181 BCS1LQ9Y276 419 aa23.18■■□□□ 1.3
CCDC12-210ENST00000604181 RPS6KA4O75676 772 aa23.17■■□□□ 1.3
CCDC12-210ENST00000604181 DPEP1P16444 411 aa23.17■■□□□ 1.3
CCDC12-210ENST00000604181 NLGN1Q8N2Q7 840 aa23.17■■□□□ 1.3
CCDC12-210ENST00000604181 BRCA1P38398 1863 aaKnown RBP23.17■■□□□ 1.3
CCDC12-210ENST00000604181 HSP90AB1P08238 724 aaKnown RBP23.16■■□□□ 1.3
CCDC12-210ENST00000604181 CABP4P57796 275 aa23.16■■□□□ 1.3
CCDC12-210ENST00000604181 TGFB2P61812 414 aa23.16■■□□□ 1.3
CCDC12-210ENST00000604181 IFFO2Q5TF58 517 aa23.16■■□□□ 1.3
CCDC12-210ENST00000604181 PTCD1O75127 700 aaKnown RBP23.15■■□□□ 1.3
CCDC12-210ENST00000604181 ADRA2BP18089 450 aa23.15■■□□□ 1.3
CCDC12-210ENST00000604181 KCNA3P22001 575 aa23.14■■□□□ 1.29
CCDC12-210ENST00000604181 SRP68Q9UHB9 627 aaKnown RBP23.14■■□□□ 1.29
CCDC12-210ENST00000604181 RFC4P35249 363 aa23.13■■□□□ 1.29
CCDC12-210ENST00000604181 AMOTQ4VCS5 1084 aa23.13■■□□□ 1.29
CCDC12-210ENST00000604181 PCGF6Q9BYE7 350 aa23.13■■□□□ 1.29
CCDC12-210ENST00000604181 TJP1Q07157 1748 aa23.13■■□□□ 1.29
CCDC12-210ENST00000604181 CRKLP46109 303 aaKnown RBP23.12■■□□□ 1.29
CCDC12-210ENST00000604181 MTHFSP49914 203 aa23.12■■□□□ 1.29
CCDC12-210ENST00000604181 NFATC2IPQ8NCF5 419 aa23.12■■□□□ 1.29
CCDC12-210ENST00000604181 CCDC87Q9NVE4 849 aa23.12■■□□□ 1.29
CCDC12-210ENST00000604181 EIF4G2P78344 907 aaKnown RBP eCLIP23.11■■□□□ 1.291e-7■□□□□ 8.4
CCDC12-210ENST00000604181 SULT6B1Q6IMI4 303 aa23.11■■□□□ 1.29
CCDC12-210ENST00000604181 ARHGAP27Q6ZUM4 889 aa23.11■■□□□ 1.29
CCDC12-210ENST00000604181 CLSPNQ9HAW4 1339 aa23.1■■□□□ 1.29
CCDC12-210ENST00000604181 FCHSD2O94868 740 aa23.1■■□□□ 1.29
CCDC12-210ENST00000604181 DDR1Q08345 913 aa23.1■■□□□ 1.29
CCDC12-210ENST00000604181 FKBP8Q14318 412 aa23.1■■□□□ 1.29
CCDC12-210ENST00000604181 MORC1Q86VD1 984 aa23.1■■□□□ 1.29
CCDC12-210ENST00000604181 PARP3Q9Y6F1 533 aa23.1■■□□□ 1.29
CCDC12-210ENST00000604181 ADAMTS7Q9UKP4 1686 aa23.09■■□□□ 1.29
CCDC12-210ENST00000604181 IL13P35225 146 aa23.09■■□□□ 1.29
CCDC12-210ENST00000604181 NMRK2Q9NPI5 230 aa23.09■■□□□ 1.29
CCDC12-210ENST00000604181 C1orf141Q5JVX7 400 aa23.08■■□□□ 1.29
CCDC12-210ENST00000604181 SCN11AQ9UI33 1791 aa23.08■■□□□ 1.29
CCDC12-210ENST00000604181 USP42Q9H9J4 1324 aaKnown RBP23.08■■□□□ 1.28
CCDC12-210ENST00000604181 INTS5Q6P9B9 1019 aaKnown RBP23.07■■□□□ 1.28
CCDC12-210ENST00000604181 ARFGEF1Q9Y6D6 1849 aa23.07■■□□□ 1.28
CCDC12-210ENST00000604181 C9orf131Q5VYM1 1079 aa23.04■■□□□ 1.28
CCDC12-210ENST00000604181 DNAJC10Q8IXB1 793 aa23.04■■□□□ 1.28
CCDC12-210ENST00000604181 LGR6Q9HBX8 967 aa23.04■■□□□ 1.28
CCDC12-210ENST00000604181 CHRNA5P30532 468 aa23.03■■□□□ 1.28
CCDC12-210ENST00000604181 POLRMTO00411 1230 aaKnown RBP23.02■■□□□ 1.28
CCDC12-210ENST00000604181 TOMM70O94826 608 aa23.02■■□□□ 1.28
CCDC12-210ENST00000604181 PIM2Q9P1W9 311 aa23.02■■□□□ 1.28
CCDC12-210ENST00000604181 TM4SF1P30408 202 aa23.01■■□□□ 1.27
CCDC12-210ENST00000604181 SLC39A6Q13433 755 aa23.01■■□□□ 1.27
CCDC12-210ENST00000604181 AMER1Q5JTC6 1135 aaPredicted RBP23.01■■□□□ 1.27
CCDC12-210ENST00000604181 DNAJC5GQ8N7S2 189 aa23.01■■□□□ 1.27
CCDC12-210ENST00000604181 SLC52A2Q9HAB3 445 aa23■■□□□ 1.27
CCDC12-210ENST00000604181 KNSTRNQ9Y448 316 aa23■■□□□ 1.27
CCDC12-210ENST00000604181 MRC1P22897 1456 aa22.99■■□□□ 1.27
CCDC12-210ENST00000604181 VIRMAQ69YN4 1812 aaKnown RBP22.99■■□□□ 1.27
CCDC12-210ENST00000604181 KCPQ6ZWJ8 1503 aa22.99■■□□□ 1.27
CCDC12-210ENST00000604181 DALRD3Q5D0E6 543 aaKnown RBP22.99■■□□□ 1.27
CCDC12-210ENST00000604181 AKAP4Q5JQC9 854 aa22.99■■□□□ 1.27
CCDC12-210ENST00000604181 USPL1Q5W0Q7 1092 aa22.99■■□□□ 1.27
CCDC12-210ENST00000604181 SOS1Q07889 1333 aaPredicted RBP22.99■■□□□ 1.27
CCDC12-210ENST00000604181 PCNTO95613 3336 aa22.99■■□□□ 1.27
CCDC12-210ENST00000604181 HMOX1P09601 288 aa22.98■■□□□ 1.27
CCDC12-210ENST00000604181 APLP1P51693 650 aa22.98■■□□□ 1.27
CCDC12-210ENST00000604181 SBF1O95248 1867 aa22.98■■□□□ 1.27
CCDC12-210ENST00000604181 AFDNP55196 1824 aaKnown RBP22.97■■□□□ 1.27
CCDC12-210ENST00000604181 RNMTO43148 476 aaKnown RBP22.97■■□□□ 1.27
CCDC12-210ENST00000604181 CYP19A1P11511 503 aaPredicted RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms