RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 SCN11AQ9UI33 1791 aa16.33■□□□□ 0.21
HERPUD2-207ENST00000603731 RNMTO43148 476 aaKnown RBP16.33■□□□□ 0.2
HERPUD2-207ENST00000603731 TEFQ10587 303 aa16.33■□□□□ 0.2
HERPUD2-207ENST00000603731 TAF7Q15545 349 aaPredicted RBP16.33■□□□□ 0.2
HERPUD2-207ENST00000603731 IFNL2Q8IZJ0 200 aa16.33■□□□□ 0.2
HERPUD2-207ENST00000603731 USP35Q9P2H5 1018 aa16.33■□□□□ 0.2
HERPUD2-207ENST00000603731 HSP90AB1P08238 724 aaKnown RBP16.32■□□□□ 0.2
HERPUD2-207ENST00000603731 MPRIPQ6WCQ1 1025 aa16.32■□□□□ 0.2
HERPUD2-207ENST00000603731 ZCRB1Q8TBF4 217 aaKnown RBP16.32■□□□□ 0.2
HERPUD2-207ENST00000603731 BABAM1Q9NWV8 329 aa16.32■□□□□ 0.2
HERPUD2-207ENST00000603731 WNK3Q9BYP7 1800 aa16.31■□□□□ 0.2
HERPUD2-207ENST00000603731 CEMIPQ8WUJ3 1361 aa16.31■□□□□ 0.2
HERPUD2-207ENST00000603731 PHKG2P15735 406 aa16.31■□□□□ 0.2
HERPUD2-207ENST00000603731 CANXP27824 592 aaKnown RBP16.31■□□□□ 0.2
HERPUD2-207ENST00000603731 RARSP54136 660 aaKnown RBP16.31■□□□□ 0.2
HERPUD2-207ENST00000603731 FAM98CQ17RN3 349 aaKnown RBP16.31■□□□□ 0.2
HERPUD2-207ENST00000603731 ERICH6BQ5W0A0 696 aa16.31■□□□□ 0.2
HERPUD2-207ENST00000603731 ZNF428Q96B54 188 aa16.31■□□□□ 0.2
HERPUD2-207ENST00000603731 LGR6Q9HBX8 967 aa16.31■□□□□ 0.2
HERPUD2-207ENST00000603731 PPP1R1BQ9UD71 204 aaPredicted RBP16.31■□□□□ 0.2
HERPUD2-207ENST00000603731 PCDH11XQ9BZA7 1347 aa16.3■□□□□ 0.2
HERPUD2-207ENST00000603731 PCDH11YQ9BZA8 1340 aa16.3■□□□□ 0.2
HERPUD2-207ENST00000603731 BCAR3O75815 825 aa16.3■□□□□ 0.2
HERPUD2-207ENST00000603731 C1QTNF8P60827 252 aa16.3■□□□□ 0.2
HERPUD2-207ENST00000603731 CAMKK2Q96RR4 588 aa16.3■□□□□ 0.2
HERPUD2-207ENST00000603731 MIS18AQ9NYP9 233 aa16.3■□□□□ 0.2
HERPUD2-207ENST00000603731 PLIN1O60240 522 aa16.29■□□□□ 0.2
HERPUD2-207ENST00000603731 TWISTNBQ3B726 338 aaPredicted RBP16.29■□□□□ 0.2
HERPUD2-207ENST00000603731 RREB1Q92766 1687 aa16.29■□□□□ 0.2
HERPUD2-207ENST00000603731 ADAMTS7Q9UKP4 1686 aa16.29■□□□□ 0.2
HERPUD2-207ENST00000603731 NUP188Q5SRE5 1749 aa16.28■□□□□ 0.2
HERPUD2-207ENST00000603731 ELL2O00472 640 aaPredicted RBP16.28■□□□□ 0.2
HERPUD2-207ENST00000603731 SMC4Q9NTJ3 1288 aa16.28■□□□□ 0.2
HERPUD2-207ENST00000603731 CEP350Q5VT06 3117 aa16.28■□□□□ 0.2
HERPUD2-207ENST00000603731 SIPA1L3O60292 1781 aaPredicted RBP16.28■□□□□ 0.2
HERPUD2-207ENST00000603731 KDM3BQ7LBC6 1761 aa16.28■□□□□ 0.2
HERPUD2-207ENST00000603731 SHANK3Q9BYB0 1731 aa16.28■□□□□ 0.2
HERPUD2-207ENST00000603731 CYP27B1O15528 508 aa16.27■□□□□ 0.2
HERPUD2-207ENST00000603731 VAMP4O75379 141 aa16.27■□□□□ 0.2
HERPUD2-207ENST00000603731 ALDH1L2Q3SY69 923 aa16.27■□□□□ 0.2
HERPUD2-207ENST00000603731 C8orf58Q8NAV2 365 aa16.27■□□□□ 0.2
HERPUD2-207ENST00000603731 DCAF5Q96JK2 942 aa16.27■□□□□ 0.2
HERPUD2-207ENST00000603731 BCL2L13Q9BXK5 485 aa16.27■□□□□ 0.2
HERPUD2-207ENST00000603731 THRAP3Q9Y2W1 955 aaKnown RBP16.27■□□□□ 0.2
HERPUD2-207ENST00000603731 UTRNP46939 3433 aa16.27■□□□□ 0.19
HERPUD2-207ENST00000603731 BTBD11A6QL63 1104 aa16.26■□□□□ 0.19
HERPUD2-207ENST00000603731 TSPYL6Q8N831 410 aa16.26■□□□□ 0.19
HERPUD2-207ENST00000603731 FRAT1Q92837 279 aaPredicted RBP16.26■□□□□ 0.19
HERPUD2-207ENST00000603731 CDCA7Q9BWT1 371 aaPredicted RBP16.26■□□□□ 0.19
HERPUD2-207ENST00000603731 SPON1Q9HCB6 807 aa16.26■□□□□ 0.19
HERPUD2-207ENST00000603731 SPATA31A1Q5TZJ5 1347 aa16.25■□□□□ 0.19
HERPUD2-207ENST00000603731 DDX54Q8TDD1 881 aaKnown RBP16.25■□□□□ 0.19
HERPUD2-207ENST00000603731 SSH1Q8WYL5 1049 aa16.25■□□□□ 0.19
HERPUD2-207ENST00000603731 THSD7AQ9UPZ6 1657 aa16.24■□□□□ 0.19
HERPUD2-207ENST00000603731 KDM6AO15550 1401 aaPredicted RBP16.24■□□□□ 0.19
HERPUD2-207ENST00000603731 SPATA31A5Q5VU36 1347 aa16.23■□□□□ 0.19
HERPUD2-207ENST00000603731 SPATA31A7Q8IWB4 1347 aa16.23■□□□□ 0.19
HERPUD2-207ENST00000603731 KIF16BQ96L93 1317 aa16.23■□□□□ 0.19
HERPUD2-207ENST00000603731 EXOC5O00471 708 aa16.23■□□□□ 0.19
HERPUD2-207ENST00000603731 KCNQ2O43526 872 aa16.23■□□□□ 0.19
HERPUD2-207ENST00000603731 TRIM37O94972 964 aa16.23■□□□□ 0.19
HERPUD2-207ENST00000603731 MS4A1P11836 297 aa16.23■□□□□ 0.19
HERPUD2-207ENST00000603731 CABP4P57796 275 aa16.23■□□□□ 0.19
HERPUD2-207ENST00000603731 SLC52A2Q9HAB3 445 aa16.23■□□□□ 0.19
HERPUD2-207ENST00000603731 SOS1Q07889 1333 aaPredicted RBP16.22■□□□□ 0.19
HERPUD2-207ENST00000603731 CACNA1FO60840 1977 aa16.22■□□□□ 0.19
HERPUD2-207ENST00000603731 IPO8O15397 1037 aaKnown RBP16.22■□□□□ 0.19
HERPUD2-207ENST00000603731 KRT24Q2M2I5 525 aa16.22■□□□□ 0.19
HERPUD2-207ENST00000603731 ZKSCAN2Q63HK3 967 aa16.22■□□□□ 0.19
HERPUD2-207ENST00000603731 PPP4R2Q9NY27 417 aa16.22■□□□□ 0.19
HERPUD2-207ENST00000603731 PDE3AQ14432 1141 aa16.21■□□□□ 0.19
HERPUD2-207ENST00000603731 NKX1-1Q15270 411 aaPredicted RBP16.21■□□□□ 0.19
HERPUD2-207ENST00000603731 CHMP4AQ9BY43 222 aa16.21■□□□□ 0.19
HERPUD2-207ENST00000603731 MRC1P22897 1456 aa16.21■□□□□ 0.19
HERPUD2-207ENST00000603731 ERVV-2B6SEH9 535 aa16.2■□□□□ 0.18
HERPUD2-207ENST00000603731 APBA3O96018 575 aa16.2■□□□□ 0.18
HERPUD2-207ENST00000603731 BRPF1P55201 1214 aaPredicted RBP16.2■□□□□ 0.18
HERPUD2-207ENST00000603731 EIF4A1P60842 406 aaKnown RBP16.2■□□□□ 0.18
HERPUD2-207ENST00000603731 BARGINQ6ZT62 677 aa16.2■□□□□ 0.18
HERPUD2-207ENST00000603731 MRPL50Q8N5N7 158 aaKnown RBP16.2■□□□□ 0.18
HERPUD2-207ENST00000603731 NFATC2IPQ8NCF5 419 aa16.2■□□□□ 0.18
HERPUD2-207ENST00000603731 CRBNQ96SW2 442 aa16.2■□□□□ 0.18
HERPUD2-207ENST00000603731 TNS2Q63HR2 1409 aa16.19■□□□□ 0.18
HERPUD2-207ENST00000603731 KAT6BQ8WYB5 2073 aa16.19■□□□□ 0.18
HERPUD2-207ENST00000603731 TCERG1O14776 1098 aaKnown RBP16.19■□□□□ 0.18
HERPUD2-207ENST00000603731 DDB1Q16531 1140 aa16.19■□□□□ 0.18
HERPUD2-207ENST00000603731 C20orf194Q5TEA3 1177 aa16.19■□□□□ 0.18
HERPUD2-207ENST00000603731 EXOC6Q8TAG9 804 aa16.19■□□□□ 0.18
HERPUD2-207ENST00000603731 NOB1Q9ULX3 412 aaKnown RBP16.19■□□□□ 0.18
HERPUD2-207ENST00000603731 CHD4Q14839 1912 aa16.18■□□□□ 0.18
HERPUD2-207ENST00000603731 KCNQ3O43525 872 aa16.18■□□□□ 0.18
HERPUD2-207ENST00000603731 NBPF14Q5TI25 921 aa16.18■□□□□ 0.18
HERPUD2-207ENST00000603731 CCDC30Q5VVM6 783 aa16.18■□□□□ 0.18
HERPUD2-207ENST00000603731 FTSJ3Q8IY81 847 aaKnown RBP16.18■□□□□ 0.18
HERPUD2-207ENST00000603731 TTC5Q8N0Z6 440 aa16.18■□□□□ 0.18
HERPUD2-207ENST00000603731 STK31Q9BXU1 1019 aa16.18■□□□□ 0.18
HERPUD2-207ENST00000603731 HOXB7P09629 217 aa16.17■□□□□ 0.18
HERPUD2-207ENST00000603731 ATF7IPQ6VMQ6 1270 aa16.17■□□□□ 0.18
HERPUD2-207ENST00000603731 ITGB4P16144 1822 aa16.17■□□□□ 0.18
HERPUD2-207ENST00000603731 ZNF790Q6PG37 636 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms