RNA–Protein interactions for RNA: ENST00000603648.1

FOCAD-208, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-208ENST00000603648 ESPNB1AK53 854 aa8.47□□□□□ -1.05
FOCAD-208ENST00000603648 GLMNQ92990 594 aa8.47□□□□□ -1.05
FOCAD-208ENST00000603648 CEP126Q9P2H0 1117 aa8.47□□□□□ -1.05
FOCAD-208ENST00000603648 DOC2BQ14184 412 aa8.46□□□□□ -1.06
FOCAD-208ENST00000603648 HDGFL1Q5TGJ6 251 aa8.46□□□□□ -1.06
FOCAD-208ENST00000603648 KCTD15Q96SI1 283 aaPredicted RBP8.46□□□□□ -1.06
FOCAD-208ENST00000603648 NBPF11Q86T75 865 aa8.45□□□□□ -1.06
FOCAD-208ENST00000603648 CD163Q86VB7 1156 aa8.45□□□□□ -1.06
FOCAD-208ENST00000603648 SEPT12Q8IYM1 358 aa8.45□□□□□ -1.06
FOCAD-208ENST00000603648 KRTAP4-7Q9BYR0 210 aa8.45□□□□□ -1.06
FOCAD-208ENST00000603648 ZNF395Q9H8N7 513 aaPredicted RBP8.45□□□□□ -1.06
FOCAD-208ENST00000603648 GIGYF1O75420 1035 aaPredicted RBP8.44□□□□□ -1.06
FOCAD-208ENST00000603648 TRIM22Q8IYM9 498 aa8.44□□□□□ -1.06
FOCAD-208ENST00000603648 ZFP64Q9NPA5 681 aa8.44□□□□□ -1.06
FOCAD-208ENST00000603648 NSFL1CQ9UNZ2 370 aaKnown RBP8.44□□□□□ -1.06
FOCAD-208ENST00000603648 INTS6LQ5JSJ4 861 aaKnown RBP8.43□□□□□ -1.06
FOCAD-208ENST00000603648 PHTF2Q8N3S3 785 aa8.43□□□□□ -1.06
FOCAD-208ENST00000603648 GMCL1Q96IK5 515 aa8.43□□□□□ -1.06
FOCAD-208ENST00000603648 CALR3Q96L12 384 aaKnown RBP8.43□□□□□ -1.06
FOCAD-208ENST00000603648 ARID3CA6NKF2 412 aa8.42□□□□□ -1.06
FOCAD-208ENST00000603648 MX2P20592 715 aa8.42□□□□□ -1.06
FOCAD-208ENST00000603648 RNF20Q5VTR2 975 aa8.42□□□□□ -1.06
FOCAD-208ENST00000603648 RIPOR1Q6ZS17 1223 aa8.42□□□□□ -1.06
FOCAD-208ENST00000603648 CCDC125Q86Z20 511 aa8.42□□□□□ -1.06
FOCAD-208ENST00000603648 CHIC2Q9UKJ5 165 aa8.42□□□□□ -1.06
FOCAD-208ENST00000603648 ARTNQ5T4W7 220 aa8.41□□□□□ -1.06
FOCAD-208ENST00000603648 LYSMD3Q7Z3D4 306 aa8.41□□□□□ -1.06
FOCAD-208ENST00000603648 GTPBP3Q969Y2 492 aaKnown RBP8.41□□□□□ -1.06
FOCAD-208ENST00000603648 TRERF1Q96PN7 1200 aa8.41□□□□□ -1.06
FOCAD-208ENST00000603648 UCN2Q96RP3 112 aa8.41□□□□□ -1.06
FOCAD-208ENST00000603648 SUV39H2Q9H5I1 410 aa8.41□□□□□ -1.06
FOCAD-208ENST00000603648 C1orf115Q9H7X2 142 aa8.41□□□□□ -1.06
FOCAD-208ENST00000603648 SHISA8B8ZZ34 492 aa8.4□□□□□ -1.06
FOCAD-208ENST00000603648 CHRNA4P43681 627 aa8.4□□□□□ -1.06
FOCAD-208ENST00000603648 DBN1Q16643 649 aa8.4□□□□□ -1.06
FOCAD-208ENST00000603648 FOXD4L6Q3SYB3 417 aaPredicted RBP8.4□□□□□ -1.06
FOCAD-208ENST00000603648 SLFNL1Q499Z3 407 aa8.4□□□□□ -1.06
FOCAD-208ENST00000603648 FOXD4L5Q5VV16 416 aaPredicted RBP8.4□□□□□ -1.06
FOCAD-208ENST00000603648 FOXD4L3Q6VB84 417 aaPredicted RBP8.4□□□□□ -1.06
FOCAD-208ENST00000603648 RNF135Q8IUD6 432 aa8.4□□□□□ -1.06
FOCAD-208ENST00000603648 NFATC2IPQ8NCF5 419 aa8.4□□□□□ -1.06
FOCAD-208ENST00000603648 OXCT2Q9BYC2 517 aaPredicted RBP8.4□□□□□ -1.06
FOCAD-208ENST00000603648 SUPT5HO00267 1087 aaKnown RBP8.39□□□□□ -1.07
FOCAD-208ENST00000603648 DHX9Q08211 1270 aaKnown RBP8.39□□□□□ -1.07
FOCAD-208ENST00000603648 ERVH48-1M5A8F1 160 aa8.38□□□□□ -1.07
FOCAD-208ENST00000603648 PIK3CDO00329 1044 aa8.38□□□□□ -1.07
FOCAD-208ENST00000603648 CCDC85AQ96PX6 553 aaPredicted RBP8.38□□□□□ -1.07
FOCAD-208ENST00000603648 RHOQP17081 205 aa8.37□□□□□ -1.07
FOCAD-208ENST00000603648 RAB15P59190 212 aa8.37□□□□□ -1.07
FOCAD-208ENST00000603648 COBLO75128 1261 aa8.36□□□□□ -1.07
FOCAD-208ENST00000603648 MAP7D1Q3KQU3 841 aa8.36□□□□□ -1.07
FOCAD-208ENST00000603648 LCE1DQ5T752 114 aa8.36□□□□□ -1.07
FOCAD-208ENST00000603648 TBC1D9Q6ZT07 1266 aa8.36□□□□□ -1.07
FOCAD-208ENST00000603648 PRICKLE2Q7Z3G6 844 aa8.36□□□□□ -1.07
FOCAD-208ENST00000603648 PLPP7Q8NBV4 271 aa8.36□□□□□ -1.07
FOCAD-208ENST00000603648 PPP1R12CQ9BZL4 782 aa8.36□□□□□ -1.07
FOCAD-208ENST00000603648 SERPINA10Q9UK55 444 aa8.36□□□□□ -1.07
FOCAD-208ENST00000603648 ATP9BO43861 1147 aa8.35□□□□□ -1.07
FOCAD-208ENST00000603648 SKIP12755 728 aa8.35□□□□□ -1.07
FOCAD-208ENST00000603648 TSGA10IPQ3SY00 556 aa8.35□□□□□ -1.07
FOCAD-208ENST00000603648 DOLKQ9UPQ8 538 aa8.35□□□□□ -1.07
FOCAD-208ENST00000603648 PCDHB11Q9Y5F2 797 aa8.35□□□□□ -1.07
FOCAD-208ENST00000603648 PALM3A6NDB9 673 aaPredicted RBP8.34□□□□□ -1.07
FOCAD-208ENST00000603648 H7C1W4 665 aa8.34□□□□□ -1.07
FOCAD-208ENST00000603648 AMPD1P23109 780 aa8.34□□□□□ -1.07
FOCAD-208ENST00000603648 CCDC82Q8N4S0 544 aa8.34□□□□□ -1.07
FOCAD-208ENST00000603648 TRIM52Q96A61 297 aa8.34□□□□□ -1.07
FOCAD-208ENST00000603648 CCDC97Q96F63 343 aaPredicted RBP8.34□□□□□ -1.07
FOCAD-208ENST00000603648 TMPRSS4Q9NRS4 437 aa8.34□□□□□ -1.07
FOCAD-208ENST00000603648 TFIP11Q9UBB9 837 aaKnown RBP8.34□□□□□ -1.07
FOCAD-208ENST00000603648 USP17L5A8MUK1 530 aa8.33□□□□□ -1.08
FOCAD-208ENST00000603648 PIK3R2O00459 728 aa8.33□□□□□ -1.08
FOCAD-208ENST00000603648 LZTS3O60299 673 aaPredicted RBP8.33□□□□□ -1.08
FOCAD-208ENST00000603648 MAP2K3P46734 347 aa8.33□□□□□ -1.08
FOCAD-208ENST00000603648 ERVK-9P63128 1117 aa8.33□□□□□ -1.08
FOCAD-208ENST00000603648 LINC00114Q6XXX2 140 aa8.33□□□□□ -1.08
FOCAD-208ENST00000603648 C1orf229Q6ZS94 237 aaPredicted RBP8.33□□□□□ -1.08
FOCAD-208ENST00000603648 PLEKHM2Q8IWE5 1019 aa8.33□□□□□ -1.08
FOCAD-208ENST00000603648 ZNF784Q8NCA9 323 aaPredicted RBP8.33□□□□□ -1.08
FOCAD-208ENST00000603648 EDARADDQ8WWZ3 215 aa8.33□□□□□ -1.08
FOCAD-208ENST00000603648 CDCA7Q9BWT1 371 aaPredicted RBP8.33□□□□□ -1.08
FOCAD-208ENST00000603648 MAFBQ9Y5Q3 323 aaPredicted RBP8.33□□□□□ -1.08
FOCAD-208ENST00000603648 LILRA1O75019 489 aa8.32□□□□□ -1.08
FOCAD-208ENST00000603648 CFAP70Q5T0N1 1121 aa8.32□□□□□ -1.08
FOCAD-208ENST00000603648 USP17L3A6NCW0 530 aa8.31□□□□□ -1.08
FOCAD-208ENST00000603648 USP17L4A6NCW7 530 aa8.31□□□□□ -1.08
FOCAD-208ENST00000603648 GNB5O14775 395 aa8.31□□□□□ -1.08
FOCAD-208ENST00000603648 CC2D2BQ6DHV5 1058 aa8.31□□□□□ -1.08
FOCAD-208ENST00000603648 USP17L2Q6R6M4 530 aa8.31□□□□□ -1.08
FOCAD-208ENST00000603648 USP17L1Q7RTZ2 530 aa8.31□□□□□ -1.08
FOCAD-208ENST00000603648 GAS2L1Q99501 681 aaPredicted RBP8.31□□□□□ -1.08
FOCAD-208ENST00000603648 GATA4P43694 442 aa8.3□□□□□ -1.08
FOCAD-208ENST00000603648 SCTRP47872 440 aa8.3□□□□□ -1.08
FOCAD-208ENST00000603648 NCOA4Q13772 614 aa8.3□□□□□ -1.08
FOCAD-208ENST00000603648 EML3Q32P44 896 aa8.3□□□□□ -1.08
FOCAD-208ENST00000603648 OXLD1Q5BKU9 147 aa8.3□□□□□ -1.08
FOCAD-208ENST00000603648 CYLDQ9NQC7 956 aa8.3□□□□□ -1.08
FOCAD-208ENST00000603648 USP4Q13107 963 aa8.29□□□□□ -1.08
FOCAD-208ENST00000603648 DEPDC4Q8N2C3 294 aa8.29□□□□□ -1.08
FOCAD-208ENST00000603648 SIRT1Q96EB6 747 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms