RNA–Protein interactions for RNA: ENST00000602861.5

HCG18-248, Transcript of HLA complex group 18, humanhuman

TSL 3

Gene HCG18, Length 372 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-248ENST00000602861 TNS3Q68CZ2 1445 aa10.41□□□□□ -0.74
HCG18-248ENST00000602861 MARF1Q9Y4F3 1742 aaKnown RBP10.41□□□□□ -0.74
HCG18-248ENST00000602861 USP32Q8NFA0 1604 aa10.41□□□□□ -0.74
HCG18-248ENST00000602861 ZNF454Q8N9F8 522 aa10.41□□□□□ -0.74
HCG18-248ENST00000602861 ZDHHC16Q969W1 377 aa10.41□□□□□ -0.74
HCG18-248ENST00000602861 PCMTD1Q96MG8 357 aaPredicted RBP10.41□□□□□ -0.74
HCG18-248ENST00000602861 TMUB1Q9BVT8 246 aa10.41□□□□□ -0.74
HCG18-248ENST00000602861 SLIT2O94813 1529 aa10.41□□□□□ -0.74
HCG18-248ENST00000602861 ZNF521Q96K83 1311 aa10.4□□□□□ -0.74
HCG18-248ENST00000602861 OATP04181 439 aa10.4□□□□□ -0.74
HCG18-248ENST00000602861 NUDT7P0C024 238 aa10.4□□□□□ -0.74
HCG18-248ENST00000602861 SAFB2Q14151 953 aaKnown RBP eCLIP10.4□□□□□ -0.74
HCG18-248ENST00000602861 DOK7Q18PE1 504 aa10.4□□□□□ -0.74
HCG18-248ENST00000602861 PADI6Q6TGC4 694 aa10.4□□□□□ -0.74
HCG18-248ENST00000602861 KRT28Q7Z3Y7 464 aa10.4□□□□□ -0.74
HCG18-248ENST00000602861 UNC5CLQ8IV45 518 aa10.4□□□□□ -0.74
HCG18-248ENST00000602861 HOMEZQ8IX15 550 aa10.4□□□□□ -0.74
HCG18-248ENST00000602861 PHOX2BQ99453 314 aa10.4□□□□□ -0.74
HCG18-248ENST00000602861 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.4□□□□□ -0.74
HCG18-248ENST00000602861 NRXN1Q9ULB1 1477 aa10.4□□□□□ -0.74
HCG18-248ENST00000602861 NPC1L1Q9UHC9 1359 aa10.39□□□□□ -0.75
HCG18-248ENST00000602861 GLI3P10071 1580 aa10.39□□□□□ -0.75
HCG18-248ENST00000602861 KDM2BQ8NHM5 1336 aa10.39□□□□□ -0.75
HCG18-248ENST00000602861 PLIN1O60240 522 aa10.39□□□□□ -0.75
HCG18-248ENST00000602861 PPP2R1AP30153 589 aa10.39□□□□□ -0.75
HCG18-248ENST00000602861 SSTR3P32745 418 aaPredicted RBP10.39□□□□□ -0.75
HCG18-248ENST00000602861 FAM161AQ3B820 660 aa10.39□□□□□ -0.75
HCG18-248ENST00000602861 PRAM1Q96QH2 718 aa10.39□□□□□ -0.75
HCG18-248ENST00000602861 C14orf93Q9H972 538 aaKnown RBP10.39□□□□□ -0.75
HCG18-248ENST00000602861 PSME1Q06323 249 aa10.38□□□□□ -0.75
HCG18-248ENST00000602861 ARSIQ5FYB1 569 aa10.38□□□□□ -0.75
HCG18-248ENST00000602861 CFAP70Q5T0N1 1121 aa10.38□□□□□ -0.75
HCG18-248ENST00000602861 CCDC125Q86Z20 511 aa10.38□□□□□ -0.75
HCG18-248ENST00000602861 CABLES1Q8TDN4 633 aa10.38□□□□□ -0.75
HCG18-248ENST00000602861 SIRT1Q96EB6 747 aa10.38□□□□□ -0.75
HCG18-248ENST00000602861 ARHGEF10O15013 1369 aa10.38□□□□□ -0.75
HCG18-248ENST00000602861 RIMBP2O15034 1052 aa10.37□□□□□ -0.75
HCG18-248ENST00000602861 FLIIQ13045 1269 aa10.37□□□□□ -0.75
HCG18-248ENST00000602861 ANKARQ7Z5J8 1434 aa10.37□□□□□ -0.75
HCG18-248ENST00000602861 METTL3Q86U44 580 aaKnown RBP10.37□□□□□ -0.75
HCG18-248ENST00000602861 KHSRPQ92945 711 aaKnown RBP eCLIP10.37□□□□□ -0.75
HCG18-248ENST00000602861 RSPH6AQ9H0K4 717 aa10.37□□□□□ -0.75
HCG18-248ENST00000602861 POGKQ9P215 609 aa10.37□□□□□ -0.75
HCG18-248ENST00000602861 ADAMTS8Q9UP79 889 aa10.37□□□□□ -0.75
HCG18-248ENST00000602861 CCDC9Q9Y3X0 531 aaKnown RBP10.37□□□□□ -0.75
HCG18-248ENST00000602861 SBNO1A3KN83 1393 aa10.37□□□□□ -0.75
HCG18-248ENST00000602861 C20orf194Q5TEA3 1177 aa10.36□□□□□ -0.75
HCG18-248ENST00000602861 DUSP27Q5VZP5 1158 aa10.36□□□□□ -0.75
HCG18-248ENST00000602861 DLC1Q96QB1 1528 aa10.36□□□□□ -0.75
HCG18-248ENST00000602861 ADGRB2O60241 1585 aa10.35□□□□□ -0.75
HCG18-248ENST00000602861 PLCH1Q4KWH8 1693 aa10.35□□□□□ -0.75
HCG18-248ENST00000602861 VPS72Q15906 364 aa10.35□□□□□ -0.75
HCG18-248ENST00000602861 SH3D19Q5HYK7 790 aa10.35□□□□□ -0.75
HCG18-248ENST00000602861 NPM2Q86SE8 214 aaKnown RBP10.35□□□□□ -0.75
HCG18-248ENST00000602861 SEPT12Q8IYM1 358 aa10.35□□□□□ -0.75
HCG18-248ENST00000602861 TRMT2AQ8IZ69 625 aaKnown RBP10.35□□□□□ -0.75
HCG18-248ENST00000602861 PMFBP1Q8TBY8 1022 aa10.35□□□□□ -0.75
HCG18-248ENST00000602861 STAC3Q96MF2 364 aa10.35□□□□□ -0.75
HCG18-248ENST00000602861 ADAM33Q9BZ11 813 aa10.35□□□□□ -0.75
HCG18-248ENST00000602861 RBM27Q9P2N5 1060 aaKnown RBP10.35□□□□□ -0.75
HCG18-248ENST00000602861 ADGRG1Q9Y653 693 aa10.35□□□□□ -0.75
HCG18-248ENST00000602861 ABCA3Q99758 1704 aa10.35□□□□□ -0.75
HCG18-248ENST00000602861 A0A0G2JS52 829 aa10.34□□□□□ -0.75
HCG18-248ENST00000602861 SF3B2Q13435 895 aaKnown RBP10.34□□□□□ -0.75
HCG18-248ENST00000602861 RTL5Q5HYW3 569 aaPredicted RBP10.34□□□□□ -0.75
HCG18-248ENST00000602861 SKAP1Q86WV1 359 aa10.34□□□□□ -0.75
HCG18-248ENST00000602861 PXYLP1Q8TE99 480 aa10.34□□□□□ -0.75
HCG18-248ENST00000602861 NLRP7Q8WX94 980 aa10.34□□□□□ -0.75
HCG18-248ENST00000602861 BEGAINQ9BUH8 593 aa10.34□□□□□ -0.75
HCG18-248ENST00000602861 ZSWIM6Q9HCJ5 1215 aa10.34□□□□□ -0.75
HCG18-248ENST00000602861 FAM217BQ9NTX9 383 aaPredicted RBP10.34□□□□□ -0.75
HCG18-248ENST00000602861 EIF3AQ14152 1382 aaKnown RBP10.34□□□□□ -0.75
HCG18-248ENST00000602861 ADGRB1O14514 1584 aa10.34□□□□□ -0.75
HCG18-248ENST00000602861 HOXB3P14651 431 aaPredicted RBP10.33□□□□□ -0.76
HCG18-248ENST00000602861 SLFN5Q08AF3 891 aa10.33□□□□□ -0.76
HCG18-248ENST00000602861 KNSTRNQ9Y448 316 aa10.33□□□□□ -0.76
HCG18-248ENST00000602861 NWD2Q9ULI1 1742 aa10.33□□□□□ -0.76
HCG18-248ENST00000602861 RGPD8O14715 1765 aaPredicted RBP10.32□□□□□ -0.76
HCG18-248ENST00000602861 EP400Q96L91 3159 aa10.32□□□□□ -0.76
HCG18-248ENST00000602861 PRSS12P56730 875 aa10.32□□□□□ -0.76
HCG18-248ENST00000602861 SKIV2LQ15477 1246 aaKnown RBP10.32□□□□□ -0.76
HCG18-248ENST00000602861 CDCA8Q53HL2 280 aa10.32□□□□□ -0.76
HCG18-248ENST00000602861 GPR153Q6NV75 609 aa10.32□□□□□ -0.76
HCG18-248ENST00000602861 CENPQQ7L2Z9 268 aaPredicted RBP10.32□□□□□ -0.76
HCG18-248ENST00000602861 DEFB132Q7Z7B7 95 aa10.32□□□□□ -0.76
HCG18-248ENST00000602861 ZNF710Q8N1W2 664 aa10.32□□□□□ -0.76
HCG18-248ENST00000602861 TTC13Q8NBP0 860 aa10.32□□□□□ -0.76
HCG18-248ENST00000602861 TRAK1Q9UPV9 953 aa10.32□□□□□ -0.76
HCG18-248ENST00000602861 TULP4Q9NRJ4 1543 aa10.32□□□□□ -0.76
HCG18-248ENST00000602861 POTEJP0CG39 1038 aa10.31□□□□□ -0.76
HCG18-248ENST00000602861 WDR43Q15061 677 aaKnown RBP eCLIP10.31□□□□□ -0.76
HCG18-248ENST00000602861 KRT27Q7Z3Y8 459 aa10.31□□□□□ -0.76
HCG18-248ENST00000602861 PRR36Q9H6K5 1346 aa10.31□□□□□ -0.76
HCG18-248ENST00000602861 SRCAPQ6ZRS2 3230 aa10.3□□□□□ -0.76
HCG18-248ENST00000602861 FAM83GA6ND36 823 aa10.3□□□□□ -0.76
HCG18-248ENST00000602861 PPM1GO15355 546 aaPredicted RBP10.3□□□□□ -0.76
HCG18-248ENST00000602861 RBM46Q8TBY0 533 aaKnown RBP10.3□□□□□ -0.76
HCG18-248ENST00000602861 USP35Q9P2H5 1018 aa10.3□□□□□ -0.76
HCG18-248ENST00000602861 LAS1LQ9Y4W2 734 aaKnown RBP10.3□□□□□ -0.76
HCG18-248ENST00000602861 BRWD3Q6RI45 1802 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms