RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 HOXB7P09629 217 aa28.36■■■□□ 2.13
PPFIA3-211ENST00000602848 PHKG2P15735 406 aa28.36■■■□□ 2.13
PPFIA3-211ENST00000602848 KRT24Q2M2I5 525 aa28.36■■■□□ 2.13
PPFIA3-211ENST00000602848 PARP4Q9UKK3 1724 aaKnown RBP28.35■■■□□ 2.13
PPFIA3-211ENST00000602848 PTPRCP08575 1304 aa28.34■■■□□ 2.13
PPFIA3-211ENST00000602848 KDM2BQ8NHM5 1336 aa28.34■■■□□ 2.13
PPFIA3-211ENST00000602848 ADAMTS2O95450 1211 aa28.34■■■□□ 2.13
PPFIA3-211ENST00000602848 KDM3BQ7LBC6 1761 aa28.34■■■□□ 2.13
PPFIA3-211ENST00000602848 CCDC30Q5VVM6 783 aa28.33■■■□□ 2.13
PPFIA3-211ENST00000602848 VIRMAQ69YN4 1812 aaKnown RBP28.32■■■□□ 2.12
PPFIA3-211ENST00000602848 BTBD11A6QL63 1104 aa28.32■■■□□ 2.12
PPFIA3-211ENST00000602848 ABCC4O15439 1325 aa28.31■■■□□ 2.12
PPFIA3-211ENST00000602848 TMEM57Q8N5G2 664 aa28.31■■■□□ 2.12
PPFIA3-211ENST00000602848 DCAF5Q96JK2 942 aa28.31■■■□□ 2.12
PPFIA3-211ENST00000602848 EIF4A1P60842 406 aaKnown RBP28.3■■■□□ 2.12
PPFIA3-211ENST00000602848 ITPRIPQ8IWB1 547 aa28.3■■■□□ 2.12
PPFIA3-211ENST00000602848 STK31Q9BXU1 1019 aa28.3■■■□□ 2.12
PPFIA3-211ENST00000602848 IL2RBP14784 551 aa28.29■■■□□ 2.12
PPFIA3-211ENST00000602848 SIPA1L3O60292 1781 aaPredicted RBP28.29■■■□□ 2.12
PPFIA3-211ENST00000602848 SCN11AQ9UI33 1791 aa28.29■■■□□ 2.12
PPFIA3-211ENST00000602848 TCERG1O14776 1098 aaKnown RBP28.28■■■□□ 2.12
PPFIA3-211ENST00000602848 SLC4A2P04920 1241 aa28.28■■■□□ 2.12
PPFIA3-211ENST00000602848 LARP1Q6PKG0 1096 aaKnown RBP28.28■■■□□ 2.12
PPFIA3-211ENST00000602848 ZCRB1Q8TBF4 217 aaKnown RBP28.28■■■□□ 2.12
PPFIA3-211ENST00000602848 STRN4Q9NRL3 753 aa28.28■■■□□ 2.12
PPFIA3-211ENST00000602848 CACNA1FO60840 1977 aa28.27■■■□□ 2.12
PPFIA3-211ENST00000602848 BTG4Q9NY30 223 aa28.27■■■□□ 2.12
PPFIA3-211ENST00000602848 PCDH11XQ9BZA7 1347 aa28.27■■■□□ 2.12
PPFIA3-211ENST00000602848 PCDH11YQ9BZA8 1340 aa28.27■■■□□ 2.12
PPFIA3-211ENST00000602848 MEX3CQ5U5Q3 659 aaKnown RBP28.26■■■□□ 2.11
PPFIA3-211ENST00000602848 SLC52A2Q9HAB3 445 aa28.26■■■□□ 2.11
PPFIA3-211ENST00000602848 KDM6AO15550 1401 aaPredicted RBP28.26■■■□□ 2.11
PPFIA3-211ENST00000602848 CYP27B1O15528 508 aa28.25■■■□□ 2.11
PPFIA3-211ENST00000602848 C8orf37Q96NL8 207 aa28.25■■■□□ 2.11
PPFIA3-211ENST00000602848 PLCH1Q4KWH8 1693 aa28.25■■■□□ 2.11
PPFIA3-211ENST00000602848 ZBTB40Q9NUA8 1239 aa28.25■■■□□ 2.11
PPFIA3-211ENST00000602848 MRC1P22897 1456 aa28.24■■■□□ 2.11
PPFIA3-211ENST00000602848 SLIT2O94813 1529 aa28.23■■■□□ 2.11
PPFIA3-211ENST00000602848 INTS3Q68E01 1043 aaKnown RBP28.23■■■□□ 2.11
PPFIA3-211ENST00000602848 RWDD1Q9H446 243 aaPredicted RBP28.23■■■□□ 2.11
PPFIA3-211ENST00000602848 HEG1Q9ULI3 1381 aa28.23■■■□□ 2.11
PPFIA3-211ENST00000602848 NKX1-1Q15270 411 aaPredicted RBP28.22■■■□□ 2.11
PPFIA3-211ENST00000602848 FNBP4Q8N3X1 1017 aaPredicted RBP28.21■■■□□ 2.11
PPFIA3-211ENST00000602848 HDGFL1Q5TGJ6 251 aa28.21■■■□□ 2.11
PPFIA3-211ENST00000602848 RGS17Q9UGC6 210 aaPredicted RBP28.21■■■□□ 2.11
PPFIA3-211ENST00000602848 PCDHB15Q9Y5E8 787 aa28.21■■■□□ 2.11
PPFIA3-211ENST00000602848 NWD2Q9ULI1 1742 aa28.2■■■□□ 2.11
PPFIA3-211ENST00000602848 AFF2P51816 1311 aa28.2■■■□□ 2.1
PPFIA3-211ENST00000602848 ZBTB7BO15156 539 aaPredicted RBP28.2■■■□□ 2.1
PPFIA3-211ENST00000602848 NGLY1Q96IV0 654 aa28.2■■■□□ 2.1
PPFIA3-211ENST00000602848 RGS12O14924 1447 aa28.19■■■□□ 2.1
PPFIA3-211ENST00000602848 NRAPQ86VF7 1730 aa28.19■■■□□ 2.1
PPFIA3-211ENST00000602848 BCL9LQ86UU0 1499 aa28.19■■■□□ 2.1
PPFIA3-211ENST00000602848 TSHZ2Q9NRE2 1034 aa28.18■■■□□ 2.1
PPFIA3-211ENST00000602848 IGHDP01880 384 aa28.18■■■□□ 2.1
PPFIA3-211ENST00000602848 ERVV-2B6SEH9 535 aa28.17■■■□□ 2.1
PPFIA3-211ENST00000602848 KCNQ3O43525 872 aa28.17■■■□□ 2.1
PPFIA3-211ENST00000602848 HDAC1Q13547 482 aaPredicted RBP28.17■■■□□ 2.1
PPFIA3-211ENST00000602848 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.17■■■□□ 2.1
PPFIA3-211ENST00000602848 ZNF790Q6PG37 636 aa28.16■■■□□ 2.1
PPFIA3-211ENST00000602848 NFATC2IPQ8NCF5 419 aa28.16■■■□□ 2.1
PPFIA3-211ENST00000602848 GIGYF1O75420 1035 aaPredicted RBP28.15■■■□□ 2.1
PPFIA3-211ENST00000602848 CABP4P57796 275 aa28.14■■■□□ 2.1
PPFIA3-211ENST00000602848 FLIIQ13045 1269 aa28.14■■■□□ 2.1
PPFIA3-211ENST00000602848 CCT4P50991 539 aaKnown RBP28.14■■■□□ 2.09
PPFIA3-211ENST00000602848 CDCA7Q9BWT1 371 aaPredicted RBP28.14■■■□□ 2.09
PPFIA3-211ENST00000602848 DISP2A7MBM2 1401 aa28.13■■■□□ 2.09
PPFIA3-211ENST00000602848 G2E3Q7L622 706 aa28.13■■■□□ 2.09
PPFIA3-211ENST00000602848 THRAP3Q9Y2W1 955 aaKnown RBP28.12■■■□□ 2.09
PPFIA3-211ENST00000602848 DBF4Q9UBU7 674 aaPredicted RBP28.11■■■□□ 2.09
PPFIA3-211ENST00000602848 USP21Q9UK80 565 aa28.11■■■□□ 2.09
PPFIA3-211ENST00000602848 SHANK3Q9BYB0 1731 aa28.1■■■□□ 2.09
PPFIA3-211ENST00000602848 TTC5Q8N0Z6 440 aa28.1■■■□□ 2.09
PPFIA3-211ENST00000602848 EIF2S2P20042 333 aaKnown RBP28.09■■■□□ 2.09
PPFIA3-211ENST00000602848 UNC5CLQ8IV45 518 aa28.09■■■□□ 2.09
PPFIA3-211ENST00000602848 PXDNLA1KZ92 1463 aa28.09■■■□□ 2.09
PPFIA3-211ENST00000602848 FKBP5Q13451 457 aaPredicted RBP28.08■■■□□ 2.09
PPFIA3-211ENST00000602848 ATRNO75882 1429 aa28.07■■■□□ 2.08
PPFIA3-211ENST00000602848 NECTIN2Q92692 538 aa28.07■■■□□ 2.08
PPFIA3-211ENST00000602848 ZNF772Q68DY9 489 aaPredicted RBP28.07■■■□□ 2.08
PPFIA3-211ENST00000602848 POTEAQ6S8J7 498 aa28.07■■■□□ 2.08
PPFIA3-211ENST00000602848 DDX54Q8TDD1 881 aaKnown RBP28.07■■■□□ 2.08
PPFIA3-211ENST00000602848 USP35Q9P2H5 1018 aa28.07■■■□□ 2.08
PPFIA3-211ENST00000602848 FMNL2Q96PY5 1086 aa28.06■■■□□ 2.08
PPFIA3-211ENST00000602848 CHPF2Q9P2E5 772 aa28.05■■■□□ 2.08
PPFIA3-211ENST00000602848 SNRPA1P09661 255 aaKnown RBP28.04■■■□□ 2.08
PPFIA3-211ENST00000602848 SLC39A6Q13433 755 aa28.04■■■□□ 2.08
PPFIA3-211ENST00000602848 HYPKQ9NX55 129 aa28.04■■■□□ 2.08
PPFIA3-211ENST00000602848 SPATA31A1Q5TZJ5 1347 aa28.03■■■□□ 2.08
PPFIA3-211ENST00000602848 WNK3Q9BYP7 1800 aa28.03■■■□□ 2.08
PPFIA3-211ENST00000602848 EXOC5O00471 708 aa28.03■■■□□ 2.08
PPFIA3-211ENST00000602848 ZNF496Q96IT1 587 aaPredicted RBP28.02■■■□□ 2.08
PPFIA3-211ENST00000602848 DDX21Q9NR30 783 aaKnown RBP eCLIP28.02■■■□□ 2.08
PPFIA3-211ENST00000602848 VPS72Q15906 364 aa28.01■■■□□ 2.07
PPFIA3-211ENST00000602848 N4BP2Q86UW6 1770 aaPredicted RBP28.01■■■□□ 2.07
PPFIA3-211ENST00000602848 SMC5Q8IY18 1101 aa28.01■■■□□ 2.07
PPFIA3-211ENST00000602848 QTRT2Q9H974 415 aaKnown RBP28.01■■■□□ 2.07
PPFIA3-211ENST00000602848 GLI3P10071 1580 aa28■■■□□ 2.07
PPFIA3-211ENST00000602848 SLC4A10Q6U841 1118 aa28■■■□□ 2.07
PPFIA3-211ENST00000602848 RPAP2Q8IXW5 612 aaPredicted RBP28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms