RNA–Protein interactions for RNA: ENST00000602841.5

SCNM1-207, Transcript of sodium channel modifier 1, humanhuman

TSL 3

Gene SCNM1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-207ENST00000602841 STRN4Q9NRL3 753 aa14.11□□□□□ -0.15
SCNM1-207ENST00000602841 RNF123Q5XPI4 1314 aa14.11□□□□□ -0.15
SCNM1-207ENST00000602841 MAP3K5Q99683 1374 aa14.1□□□□□ -0.15
SCNM1-207ENST00000602841 CYP27B1O15528 508 aa14.1□□□□□ -0.15
SCNM1-207ENST00000602841 CSB-PGBD3P0DP91 1061 aa14.1□□□□□ -0.15
SCNM1-207ENST00000602841 AMOTQ4VCS5 1084 aa14.1□□□□□ -0.15
SCNM1-207ENST00000602841 PLEKHO1Q53GL0 409 aaPredicted RBP14.1□□□□□ -0.15
SCNM1-207ENST00000602841 TOM1L2Q6ZVM7 507 aa14.1□□□□□ -0.15
SCNM1-207ENST00000602841 PTF1AQ7RTS3 328 aa14.1□□□□□ -0.15
SCNM1-207ENST00000602841 LGR6Q9HBX8 967 aa14.1□□□□□ -0.15
SCNM1-207ENST00000602841 ADAMTS7Q9UKP4 1686 aa14.1□□□□□ -0.15
SCNM1-207ENST00000602841 CHL1O00533 1208 aa14.09□□□□□ -0.15
SCNM1-207ENST00000602841 LRRC37A3O60309 1634 aa14.08□□□□□ -0.15
SCNM1-207ENST00000602841 PKD1L3Q7Z443 1732 aa14.08□□□□□ -0.16
SCNM1-207ENST00000602841 GNAT3A8MTJ3 354 aa14.08□□□□□ -0.16
SCNM1-207ENST00000602841 TATP17735 454 aaPredicted RBP14.08□□□□□ -0.16
SCNM1-207ENST00000602841 EVA1CP58658 441 aa14.08□□□□□ -0.16
SCNM1-207ENST00000602841 AKAP4Q5JQC9 854 aa14.08□□□□□ -0.16
SCNM1-207ENST00000602841 COL13A1Q5TAT6 717 aaPredicted RBP14.08□□□□□ -0.16
SCNM1-207ENST00000602841 PHKG2P15735 406 aa14.07□□□□□ -0.16
SCNM1-207ENST00000602841 TSR2Q969E8 191 aaKnown RBP14.07□□□□□ -0.16
SCNM1-207ENST00000602841 FANCIQ9NVI1 1328 aa14.07□□□□□ -0.16
SCNM1-207ENST00000602841 KDM6AO15550 1401 aaPredicted RBP14.07□□□□□ -0.16
SCNM1-207ENST00000602841 RNMTO43148 476 aaKnown RBP14.06□□□□□ -0.16
SCNM1-207ENST00000602841 NEFMP07197 916 aa14.06□□□□□ -0.16
SCNM1-207ENST00000602841 IL2RBP14784 551 aa14.06□□□□□ -0.16
SCNM1-207ENST00000602841 LMOD3Q0VAK6 560 aa14.06□□□□□ -0.16
SCNM1-207ENST00000602841 NKX1-1Q15270 411 aaPredicted RBP14.06□□□□□ -0.16
SCNM1-207ENST00000602841 SLC15A2Q16348 729 aa14.06□□□□□ -0.16
SCNM1-207ENST00000602841 ZNF530Q6P9A1 599 aaPredicted RBP14.06□□□□□ -0.16
SCNM1-207ENST00000602841 RAPGEF4Q8WZA2 1011 aa14.06□□□□□ -0.16
SCNM1-207ENST00000602841 CFAP44Q96MT7 982 aa14.06□□□□□ -0.16
SCNM1-207ENST00000602841 MBIPQ9NS73 344 aa14.06□□□□□ -0.16
SCNM1-207ENST00000602841 IFT57Q9NWB7 429 aa14.06□□□□□ -0.16
SCNM1-207ENST00000602841 PRELPP51888 382 aa14.05□□□□□ -0.16
SCNM1-207ENST00000602841 STK32BQ9NY57 414 aa14.05□□□□□ -0.16
SCNM1-207ENST00000602841 DNAJC5GQ8N7S2 189 aa14.04□□□□□ -0.16
SCNM1-207ENST00000602841 SUPT16HQ9Y5B9 1047 aaKnown RBP14.04□□□□□ -0.16
SCNM1-207ENST00000602841 ATP10DQ9P241 1426 aa14.04□□□□□ -0.16
SCNM1-207ENST00000602841 EXOSC9Q06265 439 aaKnown RBP14.03□□□□□ -0.16
SCNM1-207ENST00000602841 MPRIPQ6WCQ1 1025 aa14.03□□□□□ -0.16
SCNM1-207ENST00000602841 PELP1Q8IZL8 1130 aaKnown RBP14.03□□□□□ -0.16
SCNM1-207ENST00000602841 ZCRB1Q8TBF4 217 aaKnown RBP14.03□□□□□ -0.16
SCNM1-207ENST00000602841 SPG7Q9UQ90 795 aa14.03□□□□□ -0.16
SCNM1-207ENST00000602841 THRAP3Q9Y2W1 955 aaKnown RBP14.03□□□□□ -0.16
SCNM1-207ENST00000602841 RGPD3A6NKT7 1758 aaPredicted RBP14.02□□□□□ -0.16
SCNM1-207ENST00000602841 RGPD4Q7Z3J3 1758 aa14.02□□□□□ -0.16
SCNM1-207ENST00000602841 GNAI1P63096 354 aa14.02□□□□□ -0.17
SCNM1-207ENST00000602841 IFNL2Q8IZJ0 200 aa14.02□□□□□ -0.17
SCNM1-207ENST00000602841 TSPYL6Q8N831 410 aa14.02□□□□□ -0.17
SCNM1-207ENST00000602841 MYH16Q9H6N6 1097 aa14.02□□□□□ -0.17
SCNM1-207ENST00000602841 MIS18AQ9NYP9 233 aa14.02□□□□□ -0.17
SCNM1-207ENST00000602841 VAMP4O75379 141 aa14.01□□□□□ -0.17
SCNM1-207ENST00000602841 TXNRD1Q16881 649 aa14.01□□□□□ -0.17
SCNM1-207ENST00000602841 KRT24Q2M2I5 525 aa14.01□□□□□ -0.17
SCNM1-207ENST00000602841 C8orf58Q8NAV2 365 aa14.01□□□□□ -0.17
SCNM1-207ENST00000602841 GPBP1L1Q9HC44 474 aaPredicted RBP14.01□□□□□ -0.17
SCNM1-207ENST00000602841 BABAM1Q9NWV8 329 aa14.01□□□□□ -0.17
SCNM1-207ENST00000602841 RCAN3Q9UKA8 241 aa14.01□□□□□ -0.17
SCNM1-207ENST00000602841 PARP4Q9UKK3 1724 aaKnown RBP14.01□□□□□ -0.17
SCNM1-207ENST00000602841 MRC1P22897 1456 aa14□□□□□ -0.17
SCNM1-207ENST00000602841 HEG1Q9ULI3 1381 aa14□□□□□ -0.17
SCNM1-207ENST00000602841 KCNQ3O43525 872 aa14□□□□□ -0.17
SCNM1-207ENST00000602841 CALD1Q05682 793 aaKnown RBP14□□□□□ -0.17
SCNM1-207ENST00000602841 TAF7Q15545 349 aaPredicted RBP14□□□□□ -0.17
SCNM1-207ENST00000602841 RTF1Q92541 710 aaKnown RBP14□□□□□ -0.17
SCNM1-207ENST00000602841 WNK3Q9BYP7 1800 aa13.99□□□□□ -0.17
SCNM1-207ENST00000602841 YBX3P16989 372 aaKnown RBP eCLIP13.99□□□□□ -0.171e-8■■■□□ 16.6
SCNM1-207ENST00000602841 RARSP54136 660 aaKnown RBP13.99□□□□□ -0.17
SCNM1-207ENST00000602841 DCAF5Q96JK2 942 aa13.99□□□□□ -0.17
SCNM1-207ENST00000602841 PCDH11XQ9BZA7 1347 aa13.98□□□□□ -0.17
SCNM1-207ENST00000602841 PCDH11YQ9BZA8 1340 aa13.98□□□□□ -0.17
SCNM1-207ENST00000602841 BCAR3O75815 825 aa13.98□□□□□ -0.17
SCNM1-207ENST00000602841 C1orf141Q5JVX7 400 aa13.98□□□□□ -0.17
SCNM1-207ENST00000602841 NLGN2Q8NFZ4 835 aa13.98□□□□□ -0.17
SCNM1-207ENST00000602841 SIPA1L3O60292 1781 aaPredicted RBP13.98□□□□□ -0.17
SCNM1-207ENST00000602841 TNS4Q8IZW8 715 aa13.97□□□□□ -0.17
SCNM1-207ENST00000602841 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
SCNM1-207ENST00000602841 PIAS4Q8N2W9 510 aaPredicted RBP13.97□□□□□ -0.17
SCNM1-207ENST00000602841 CDCA7Q9BWT1 371 aaPredicted RBP13.97□□□□□ -0.17
SCNM1-207ENST00000602841 SLC52A2Q9HAB3 445 aa13.97□□□□□ -0.17
SCNM1-207ENST00000602841 LAS1LQ9Y4W2 734 aaKnown RBP13.97□□□□□ -0.17
SCNM1-207ENST00000602841 GRIN3BO60391 1043 aa13.96□□□□□ -0.17
SCNM1-207ENST00000602841 CT47B1P0C2W7 299 aaPredicted RBP13.96□□□□□ -0.17
SCNM1-207ENST00000602841 APLP1P51693 650 aa13.96□□□□□ -0.17
SCNM1-207ENST00000602841 EIF4A1P60842 406 aaKnown RBP13.96□□□□□ -0.17
SCNM1-207ENST00000602841 MARCH10Q8NA82 808 aaPredicted RBP13.96□□□□□ -0.17
SCNM1-207ENST00000602841 ZNF526Q8TF50 670 aaPredicted RBP13.96□□□□□ -0.17
SCNM1-207ENST00000602841 TNS2Q63HR2 1409 aa13.96□□□□□ -0.18
SCNM1-207ENST00000602841 SCN11AQ9UI33 1791 aa13.96□□□□□ -0.18
SCNM1-207ENST00000602841 EXOC5O00471 708 aa13.95□□□□□ -0.18
SCNM1-207ENST00000602841 NFATC2IPQ8NCF5 419 aa13.95□□□□□ -0.18
SCNM1-207ENST00000602841 DDX54Q8TDD1 881 aaKnown RBP13.95□□□□□ -0.18
SCNM1-207ENST00000602841 TOGARAM1Q9Y4F4 1720 aa13.95□□□□□ -0.18
SCNM1-207ENST00000602841 KDM3BQ7LBC6 1761 aa13.94□□□□□ -0.18
SCNM1-207ENST00000602841 BRPF1P55201 1214 aaPredicted RBP13.94□□□□□ -0.18
SCNM1-207ENST00000602841 RRP1P56182 461 aaKnown RBP13.94□□□□□ -0.18
SCNM1-207ENST00000602841 SSH1Q8WYL5 1049 aa13.94□□□□□ -0.18
SCNM1-207ENST00000602841 TSPYL4Q9UJ04 414 aa13.94□□□□□ -0.18
SCNM1-207ENST00000602841 ERVV-2B6SEH9 535 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms