RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 FAM177BA6PVY3 158 aa10.5□□□□□ -0.73
COMMD3-215ENST00000602574 RPS6KA5O75582 802 aa10.5□□□□□ -0.73
COMMD3-215ENST00000602574 RBBP5Q15291 538 aaKnown RBP10.5□□□□□ -0.73
COMMD3-215ENST00000602574 E2F4Q16254 413 aa10.5□□□□□ -0.73
COMMD3-215ENST00000602574 NAIF1Q69YI7 327 aaPredicted RBP10.5□□□□□ -0.73
COMMD3-215ENST00000602574 LRSAM1Q6UWE0 723 aa10.5□□□□□ -0.73
COMMD3-215ENST00000602574 NCAPG2Q86XI2 1143 aa10.5□□□□□ -0.73
COMMD3-215ENST00000602574 HSCBQ8IWL3 235 aa10.5□□□□□ -0.73
COMMD3-215ENST00000602574 ZCRB1Q8TBF4 217 aaKnown RBP10.5□□□□□ -0.73
COMMD3-215ENST00000602574 ZNF428Q96B54 188 aa10.5□□□□□ -0.73
COMMD3-215ENST00000602574 CWC25Q9NXE8 425 aaPredicted RBP10.5□□□□□ -0.73
COMMD3-215ENST00000602574 LRRFIP2Q9Y608 721 aaKnown RBP10.5□□□□□ -0.73
COMMD3-215ENST00000602574 ROCK1Q13464 1354 aa10.5□□□□□ -0.73
COMMD3-215ENST00000602574 MYBL2P10244 700 aa10.5□□□□□ -0.73
COMMD3-215ENST00000602574 CHMLP26374 656 aa10.5□□□□□ -0.73
COMMD3-215ENST00000602574 PRPHP41219 470 aa10.5□□□□□ -0.73
COMMD3-215ENST00000602574 CRYMQ14894 314 aa10.5□□□□□ -0.73
COMMD3-215ENST00000602574 TTC19Q6DKK2 380 aaPredicted RBP10.5□□□□□ -0.73
COMMD3-215ENST00000602574 UBA5Q9GZZ9 404 aa10.5□□□□□ -0.73
COMMD3-215ENST00000602574 ABCA10Q8WWZ4 1543 aa10.5□□□□□ -0.73
COMMD3-215ENST00000602574 PTPRCP08575 1304 aa10.49□□□□□ -0.73
COMMD3-215ENST00000602574 LRRIQ1Q96JM4 1722 aa10.49□□□□□ -0.73
COMMD3-215ENST00000602574 MTUS2Q5JR59 1369 aa10.49□□□□□ -0.73
COMMD3-215ENST00000602574 RBM6P78332 1123 aaKnown RBP10.49□□□□□ -0.73
COMMD3-215ENST00000602574 TBC1D8BQ0IIM8 1120 aa10.49□□□□□ -0.73
COMMD3-215ENST00000602574 ZRSR1Q15695 479 aaKnown RBP10.49□□□□□ -0.73
COMMD3-215ENST00000602574 CAVIN1Q6NZI2 390 aaKnown RBP10.49□□□□□ -0.73
COMMD3-215ENST00000602574 ATL2Q8NHH9 583 aa10.49□□□□□ -0.73
COMMD3-215ENST00000602574 CXorf38Q8TB03 319 aa10.49□□□□□ -0.73
COMMD3-215ENST00000602574 ZSCAN16Q9H4T2 348 aaPredicted RBP10.49□□□□□ -0.73
COMMD3-215ENST00000602574 SPATS2LQ9NUQ6 558 aaKnown RBP10.49□□□□□ -0.73
COMMD3-215ENST00000602574 GNL3LQ9NVN8 582 aaKnown RBP10.49□□□□□ -0.73
COMMD3-215ENST00000602574 CDKL5O76039 1030 aa10.49□□□□□ -0.73
COMMD3-215ENST00000602574 CORO7P57737 925 aa10.49□□□□□ -0.73
COMMD3-215ENST00000602574 MCM6Q14566 821 aa10.49□□□□□ -0.73
COMMD3-215ENST00000602574 TBC1D25Q3MII6 688 aa10.49□□□□□ -0.73
COMMD3-215ENST00000602574 RPUSD2Q8IZ73 545 aaKnown RBP10.49□□□□□ -0.73
COMMD3-215ENST00000602574 ARPC5LQ9BPX5 153 aa10.49□□□□□ -0.73
COMMD3-215ENST00000602574 PTPRKQ15262 1439 aa10.49□□□□□ -0.73
COMMD3-215ENST00000602574 KDRP35968 1356 aa10.48□□□□□ -0.73
COMMD3-215ENST00000602574 ATP8B1O43520 1251 aa10.48□□□□□ -0.73
COMMD3-215ENST00000602574 HTATSF1O43719 755 aaKnown RBP10.48□□□□□ -0.73
COMMD3-215ENST00000602574 GCFC2P16383 781 aaKnown RBP10.48□□□□□ -0.73
COMMD3-215ENST00000602574 PEX19P40855 299 aa10.48□□□□□ -0.73
COMMD3-215ENST00000602574 KIAA1524Q8TCG1 905 aa10.48□□□□□ -0.73
COMMD3-215ENST00000602574 BLOC1S6Q9UL45 172 aa10.48□□□□□ -0.73
COMMD3-215ENST00000602574 SOS1Q07889 1333 aaPredicted RBP10.48□□□□□ -0.73
COMMD3-215ENST00000602574 KIF2AO00139 706 aaPredicted RBP10.47□□□□□ -0.73
COMMD3-215ENST00000602574 SNUPNO95149 360 aaKnown RBP10.47□□□□□ -0.73
COMMD3-215ENST00000602574 GIMAP7Q8NHV1 300 aa10.47□□□□□ -0.73
COMMD3-215ENST00000602574 ZNF483Q8TF39 744 aaPredicted RBP10.47□□□□□ -0.73
COMMD3-215ENST00000602574 AK7Q96M32 723 aa10.47□□□□□ -0.73
COMMD3-215ENST00000602574 ABCF2Q9UG63 623 aa10.47□□□□□ -0.73
COMMD3-215ENST00000602574 BAG4O95429 457 aaKnown RBP10.47□□□□□ -0.73
COMMD3-215ENST00000602574 KMT5BQ4FZB7 885 aa10.47□□□□□ -0.73
COMMD3-215ENST00000602574 KIF2CQ99661 725 aa10.47□□□□□ -0.73
COMMD3-215ENST00000602574 TRIM6Q9C030 488 aaPredicted RBP10.47□□□□□ -0.73
COMMD3-215ENST00000602574 IQCGQ9H095 443 aaKnown RBP10.47□□□□□ -0.73
COMMD3-215ENST00000602574 FRMD4BQ9Y2L6 1034 aa10.47□□□□□ -0.73
COMMD3-215ENST00000602574 POLA1P09884 1462 aaPredicted RBP10.47□□□□□ -0.73
COMMD3-215ENST00000602574 BRD4O60885 1362 aaPredicted RBP10.47□□□□□ -0.73
COMMD3-215ENST00000602574 SHROOM2Q13796 1616 aa10.47□□□□□ -0.73
COMMD3-215ENST00000602574 DENND4BO75064 1496 aaPredicted RBP10.46□□□□□ -0.73
COMMD3-215ENST00000602574 SEC24BO95487 1268 aa10.46□□□□□ -0.73
COMMD3-215ENST00000602574 ALDH1B1P30837 517 aa10.46□□□□□ -0.73
COMMD3-215ENST00000602574 ELF1P32519 619 aa10.46□□□□□ -0.73
COMMD3-215ENST00000602574 NEDD9Q14511 834 aa10.46□□□□□ -0.73
COMMD3-215ENST00000602574 FAM107BQ9H098 131 aa10.46□□□□□ -0.73
COMMD3-215ENST00000602574 GOPCQ9HD26 462 aa10.46□□□□□ -0.73
COMMD3-215ENST00000602574 DNMBPQ6XZF7 1577 aa10.46□□□□□ -0.73
COMMD3-215ENST00000602574 E9PCH4 1651 aa10.46□□□□□ -0.73
COMMD3-215ENST00000602574 NEBLO76041 1014 aa10.46□□□□□ -0.74
COMMD3-215ENST00000602574 PAX3P23760 479 aa10.46□□□□□ -0.74
COMMD3-215ENST00000602574 PRIM1P49642 420 aaKnown RBP10.46□□□□□ -0.74
COMMD3-215ENST00000602574 NAP1L1P55209 391 aaKnown RBP10.46□□□□□ -0.74
COMMD3-215ENST00000602574 ARMC2Q8NEN0 867 aa10.46□□□□□ -0.74
COMMD3-215ENST00000602574 NEK11Q8NG66 645 aa10.46□□□□□ -0.74
COMMD3-215ENST00000602574 DNAAF4Q8WXU2 420 aa10.46□□□□□ -0.74
COMMD3-215ENST00000602574 EXOC4Q96A65 974 aa10.46□□□□□ -0.74
COMMD3-215ENST00000602574 UBXN6Q9BZV1 441 aa10.46□□□□□ -0.74
COMMD3-215ENST00000602574 MBD5Q9P267 1494 aa10.45□□□□□ -0.74
COMMD3-215ENST00000602574 TPD52L2O43399 206 aaKnown RBP10.45□□□□□ -0.74
COMMD3-215ENST00000602574 NEXNQ0ZGT2 675 aa10.45□□□□□ -0.74
COMMD3-215ENST00000602574 ERC1Q8IUD2 1116 aa10.45□□□□□ -0.74
COMMD3-215ENST00000602574 CRACR2AQ9BSW2 395 aa10.45□□□□□ -0.74
COMMD3-215ENST00000602574 RMI1Q9H9A7 625 aa10.45□□□□□ -0.74
COMMD3-215ENST00000602574 FHOD3Q2V2M9 1422 aa10.45□□□□□ -0.74
COMMD3-215ENST00000602574 EIF3CLB5ME19 914 aaKnown RBP10.45□□□□□ -0.74
COMMD3-215ENST00000602574 CACTIN-AS1Q8N1I8 211 aa10.45□□□□□ -0.74
COMMD3-215ENST00000602574 OGFOD1Q8N543 542 aa10.45□□□□□ -0.74
COMMD3-215ENST00000602574 SYAP1Q96A49 352 aaPredicted RBP10.45□□□□□ -0.74
COMMD3-215ENST00000602574 EIF3CQ99613 913 aaKnown RBP10.45□□□□□ -0.74
COMMD3-215ENST00000602574 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.45□□□□□ -0.74
COMMD3-215ENST00000602574 ECEL1O95672 775 aa10.44□□□□□ -0.74
COMMD3-215ENST00000602574 NAT1P18440 290 aa10.44□□□□□ -0.74
COMMD3-215ENST00000602574 RDXP35241 583 aaKnown RBP10.44□□□□□ -0.74
COMMD3-215ENST00000602574 MRPL12P52815 198 aaKnown RBP10.44□□□□□ -0.74
COMMD3-215ENST00000602574 FILIP1LQ4L180 1135 aa10.44□□□□□ -0.74
COMMD3-215ENST00000602574 HSP90AB2PQ58FF8 381 aa10.44□□□□□ -0.74
COMMD3-215ENST00000602574 NFXL1Q6ZNB6 911 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms