RNA–Protein interactions for RNA: ENST00000602550.5

HCG18-245, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 559 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-245ENST00000602550 CDCA8Q53HL2 280 aa19.81■□□□□ 0.76
HCG18-245ENST00000602550 ARHGAP27Q6ZUM4 889 aa19.81■□□□□ 0.76
HCG18-245ENST00000602550 IFNL2Q8IZJ0 200 aa19.81■□□□□ 0.76
HCG18-245ENST00000602550 RTCBQ9Y3I0 505 aaKnown RBP19.81■□□□□ 0.76
HCG18-245ENST00000602550 A0A0G2JLW4 131 aa19.8■□□□□ 0.76
HCG18-245ENST00000602550 NCAPD2Q15021 1401 aa19.79■□□□□ 0.76
HCG18-245ENST00000602550 RBM46Q8TBY0 533 aaKnown RBP19.79■□□□□ 0.76
HCG18-245ENST00000602550 CCDC87Q9NVE4 849 aa19.79■□□□□ 0.76
HCG18-245ENST00000602550 EMILIN1Q9Y6C2 1016 aa19.79■□□□□ 0.76
HCG18-245ENST00000602550 N4BP2Q86UW6 1770 aaPredicted RBP19.79■□□□□ 0.76
HCG18-245ENST00000602550 PPM1GO15355 546 aaPredicted RBP19.78■□□□□ 0.76
HCG18-245ENST00000602550 ADRA2BP18089 450 aa19.78■□□□□ 0.76
HCG18-245ENST00000602550 C16orf71Q8IYS4 520 aaPredicted RBP19.78■□□□□ 0.76
HCG18-245ENST00000602550 NMRK2Q9NPI5 230 aa19.78■□□□□ 0.76
HCG18-245ENST00000602550 ATG3Q9NT62 314 aa19.78■□□□□ 0.76
HCG18-245ENST00000602550 FCHSD2O94868 740 aa19.77■□□□□ 0.76
HCG18-245ENST00000602550 PHKG2P15735 406 aa19.77■□□□□ 0.76
HCG18-245ENST00000602550 WASHC2AQ641Q2 1341 aa19.76■□□□□ 0.75
HCG18-245ENST00000602550 RC3H1Q5TC82 1133 aaKnown RBP19.76■□□□□ 0.75
HCG18-245ENST00000602550 EYA1Q99502 592 aa19.76■□□□□ 0.75
HCG18-245ENST00000602550 KIAA1551Q9HCM1 1747 aa19.76■□□□□ 0.75
HCG18-245ENST00000602550 C10orf71Q711Q0 1435 aa19.76■□□□□ 0.75
HCG18-245ENST00000602550 DPEP1P16444 411 aa19.75■□□□□ 0.75
HCG18-245ENST00000602550 PARP3Q9Y6F1 533 aa19.75■□□□□ 0.75
HCG18-245ENST00000602550 RFC4P35249 363 aa19.74■□□□□ 0.75
HCG18-245ENST00000602550 FSTL1Q12841 308 aa19.74■□□□□ 0.75
HCG18-245ENST00000602550 ARHGEF1Q92888 912 aaKnown RBP19.74■□□□□ 0.75
HCG18-245ENST00000602550 PLEKHG2Q9H7P9 1386 aa19.73■□□□□ 0.75
HCG18-245ENST00000602550 C9orf131Q5VYM1 1079 aa19.73■□□□□ 0.75
HCG18-245ENST00000602550 KLRG1Q96E93 195 aa19.73■□□□□ 0.75
HCG18-245ENST00000602550 WDR90Q96KV7 1748 aa19.73■□□□□ 0.75
HCG18-245ENST00000602550 ERVV-2B6SEH9 535 aa19.72■□□□□ 0.75
HCG18-245ENST00000602550 RPS6KA4O75676 772 aa19.72■□□□□ 0.75
HCG18-245ENST00000602550 GYS1P13807 737 aa19.72■□□□□ 0.75
HCG18-245ENST00000602550 RBM42Q9BTD8 480 aaKnown RBP19.72■□□□□ 0.75
HCG18-245ENST00000602550 CARD14Q9BXL6 1004 aa19.72■□□□□ 0.75
HCG18-245ENST00000602550 PIM2Q9P1W9 311 aa19.72■□□□□ 0.75
HCG18-245ENST00000602550 KDM2BQ8NHM5 1336 aa19.72■□□□□ 0.75
HCG18-245ENST00000602550 BRCA1P38398 1863 aaKnown RBP19.71■□□□□ 0.75
HCG18-245ENST00000602550 JMYQ8N9B5 988 aa19.71■□□□□ 0.75
HCG18-245ENST00000602550 ARFGEF1Q9Y6D6 1849 aa19.71■□□□□ 0.75
HCG18-245ENST00000602550 ZNF831Q5JPB2 1677 aa19.71■□□□□ 0.75
HCG18-245ENST00000602550 CNTNAP4Q9C0A0 1308 aa19.71■□□□□ 0.75
HCG18-245ENST00000602550 C4AP0C0L4 1744 aa19.71■□□□□ 0.75
HCG18-245ENST00000602550 KDRP35968 1356 aa19.7■□□□□ 0.74
HCG18-245ENST00000602550 HSP90AB1P08238 724 aaKnown RBP19.7■□□□□ 0.74
HCG18-245ENST00000602550 ANKRD26Q9UPS8 1709 aa19.69■□□□□ 0.74
HCG18-245ENST00000602550 KCNA3P22001 575 aa19.69■□□□□ 0.74
HCG18-245ENST00000602550 SLC4A9Q96Q91 983 aa19.69■□□□□ 0.74
HCG18-245ENST00000602550 DALRD3Q5D0E6 543 aaKnown RBP19.68■□□□□ 0.74
HCG18-245ENST00000602550 DCAF5Q96JK2 942 aa19.68■□□□□ 0.74
HCG18-245ENST00000602550 POLKQ9UBT6 870 aa19.67■□□□□ 0.74
HCG18-245ENST00000602550 COL13A1Q5TAT6 717 aaPredicted RBP19.66■□□□□ 0.74
HCG18-245ENST00000602550 MYH14Q7Z406 1995 aaKnown RBP19.66■□□□□ 0.74
HCG18-245ENST00000602550 COL5A3P25940 1745 aaPredicted RBP19.65■□□□□ 0.74
HCG18-245ENST00000602550 HTRA3P83110 453 aa19.65■□□□□ 0.74
HCG18-245ENST00000602550 PLEKHO1Q53GL0 409 aaPredicted RBP19.65■□□□□ 0.74
HCG18-245ENST00000602550 RRAGCQ9HB90 399 aa19.65■□□□□ 0.74
HCG18-245ENST00000602550 RNF181Q9P0P0 153 aa19.65■□□□□ 0.74
HCG18-245ENST00000602550 CABP4P57796 275 aa19.64■□□□□ 0.73
HCG18-245ENST00000602550 EIF4A2Q14240 407 aaKnown RBP19.64■□□□□ 0.73
HCG18-245ENST00000602550 KCPQ6ZWJ8 1503 aa19.64■□□□□ 0.73
HCG18-245ENST00000602550 SMC1BQ8NDV3 1235 aa19.63■□□□□ 0.73
HCG18-245ENST00000602550 SBF1O95248 1867 aa19.62■□□□□ 0.73
HCG18-245ENST00000602550 AMOTQ4VCS5 1084 aa19.62■□□□□ 0.73
HCG18-245ENST00000602550 TNS4Q8IZW8 715 aa19.61■□□□□ 0.73
HCG18-245ENST00000602550 TNRC6CQ9HCJ0 1690 aaKnown RBP19.61■□□□□ 0.73
HCG18-245ENST00000602550 USP42Q9H9J4 1324 aaKnown RBP19.6■□□□□ 0.73
HCG18-245ENST00000602550 ZC3H4Q9UPT8 1303 aaKnown RBP19.6■□□□□ 0.73
HCG18-245ENST00000602550 PTCD1O75127 700 aaKnown RBP19.6■□□□□ 0.73
HCG18-245ENST00000602550 CRKLP46109 303 aaKnown RBP19.6■□□□□ 0.73
HCG18-245ENST00000602550 FKBP8Q14318 412 aa19.6■□□□□ 0.73
HCG18-245ENST00000602550 ZNF530Q6P9A1 599 aaPredicted RBP19.6■□□□□ 0.73
HCG18-245ENST00000602550 SRP68Q9UHB9 627 aaKnown RBP19.59■□□□□ 0.73
HCG18-245ENST00000602550 CAPN15O75808 1086 aa19.58■□□□□ 0.72
HCG18-245ENST00000602550 CHRNA5P30532 468 aa19.58■□□□□ 0.72
HCG18-245ENST00000602550 MTHFSP49914 203 aa19.58■□□□□ 0.72
HCG18-245ENST00000602550 PRELPP51888 382 aa19.58■□□□□ 0.72
HCG18-245ENST00000602550 DDR1Q08345 913 aa19.58■□□□□ 0.72
HCG18-245ENST00000602550 TNNT2P45379 298 aaPredicted RBP19.57■□□□□ 0.72
HCG18-245ENST00000602550 C1orf141Q5JVX7 400 aa19.57■□□□□ 0.72
HCG18-245ENST00000602550 ZPR1O75312 459 aa19.56■□□□□ 0.72
HCG18-245ENST00000602550 VEGFAP15692 232 aaPredicted RBP19.56■□□□□ 0.72
HCG18-245ENST00000602550 TM4SF1P30408 202 aa19.56■□□□□ 0.72
HCG18-245ENST00000602550 NFATC2IPQ8NCF5 419 aa19.56■□□□□ 0.72
HCG18-245ENST00000602550 KDM6AO15550 1401 aaPredicted RBP19.56■□□□□ 0.72
HCG18-245ENST00000602550 POLRMTO00411 1230 aaKnown RBP19.55■□□□□ 0.72
HCG18-245ENST00000602550 GLTPD2A6NH11 291 aa19.54■□□□□ 0.72
HCG18-245ENST00000602550 PCNTO95613 3336 aa19.53■□□□□ 0.72
HCG18-245ENST00000602550 LMNB1P20700 586 aa19.53■□□□□ 0.72
HCG18-245ENST00000602550 INTS5Q6P9B9 1019 aaKnown RBP19.52■□□□□ 0.72
HCG18-245ENST00000602550 USPL1Q5W0Q7 1092 aa19.51■□□□□ 0.71
HCG18-245ENST00000602550 HSPA1AP0DMV8 641 aaKnown RBP19.5■□□□□ 0.71
HCG18-245ENST00000602550 HSPA1BP0DMV9 641 aaKnown RBP19.5■□□□□ 0.71
HCG18-245ENST00000602550 RASSF7Q02833 373 aa19.5■□□□□ 0.71
HCG18-245ENST00000602550 TTLL6Q8N841 843 aa19.49■□□□□ 0.71
HCG18-245ENST00000602550 NARFQ9UHQ1 456 aa19.49■□□□□ 0.71
HCG18-245ENST00000602550 CCDC88AQ3V6T2 1871 aa19.49■□□□□ 0.71
HCG18-245ENST00000602550 TJP1Q07157 1748 aa19.48■□□□□ 0.71
HCG18-245ENST00000602550 DNAJC10Q8IXB1 793 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms