RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 MAP3K19Q56UN5 1328 aa20.64■□□□□ 0.89
TRIM11-205ENST00000602308 TMF1P82094 1093 aa20.64■□□□□ 0.89
TRIM11-205ENST00000602308 DALRD3Q5D0E6 543 aaKnown RBP20.64■□□□□ 0.89
TRIM11-205ENST00000602308 MAP2P11137 1827 aaKnown RBP20.64■□□□□ 0.89
TRIM11-205ENST00000602308 SBF1O95248 1867 aa20.63■□□□□ 0.89
TRIM11-205ENST00000602308 PCDH11XQ9BZA7 1347 aa20.63■□□□□ 0.89
TRIM11-205ENST00000602308 PCDH11YQ9BZA8 1340 aa20.63■□□□□ 0.89
TRIM11-205ENST00000602308 CTCFP49711 727 aaPredicted RBP20.63■□□□□ 0.89
TRIM11-205ENST00000602308 GLTPD2A6NH11 291 aa20.62■□□□□ 0.89
TRIM11-205ENST00000602308 CYP27B1O15528 508 aa20.62■□□□□ 0.89
TRIM11-205ENST00000602308 MLLT1Q03111 559 aaPredicted RBP20.62■□□□□ 0.89
TRIM11-205ENST00000602308 RAPGEF4Q8WZA2 1011 aa20.62■□□□□ 0.89
TRIM11-205ENST00000602308 CREBZFQ9NS37 354 aa20.62■□□□□ 0.89
TRIM11-205ENST00000602308 AMPHP49418 695 aa20.61■□□□□ 0.89
TRIM11-205ENST00000602308 ZC3H4Q9UPT8 1303 aaKnown RBP20.6■□□□□ 0.89
TRIM11-205ENST00000602308 POTECB2RU33 542 aa20.6■□□□□ 0.89
TRIM11-205ENST00000602308 TATP17735 454 aaPredicted RBP20.6■□□□□ 0.89
TRIM11-205ENST00000602308 C4AP0C0L4 1744 aa20.6■□□□□ 0.89
TRIM11-205ENST00000602308 ITGB4P16144 1822 aa20.6■□□□□ 0.89
TRIM11-205ENST00000602308 GYS1P13807 737 aa20.59■□□□□ 0.89
TRIM11-205ENST00000602308 ATP6V1AP38606 617 aa20.59■□□□□ 0.89
TRIM11-205ENST00000602308 LBX1P52954 281 aa20.59■□□□□ 0.89
TRIM11-205ENST00000602308 RASSF7Q02833 373 aa20.59■□□□□ 0.89
TRIM11-205ENST00000602308 TRAPPC3LQ5T215 181 aa20.59■□□□□ 0.89
TRIM11-205ENST00000602308 PARP3Q9Y6F1 533 aa20.59■□□□□ 0.89
TRIM11-205ENST00000602308 EDC4Q6P2E9 1401 aaKnown RBP20.59■□□□□ 0.89
TRIM11-205ENST00000602308 RGS19P49795 217 aa20.58■□□□□ 0.89
TRIM11-205ENST00000602308 KDM6AO15550 1401 aaPredicted RBP20.57■□□□□ 0.88
TRIM11-205ENST00000602308 CHRNA5P30532 468 aa20.57■□□□□ 0.88
TRIM11-205ENST00000602308 HDGFL2Q7Z4V5 671 aaPredicted RBP20.57■□□□□ 0.88
TRIM11-205ENST00000602308 TMC1Q8TDI8 760 aa20.57■□□□□ 0.88
TRIM11-205ENST00000602308 ARHGEF1Q92888 912 aaKnown RBP20.57■□□□□ 0.88
TRIM11-205ENST00000602308 AIDAQ96BJ3 306 aa20.57■□□□□ 0.88
TRIM11-205ENST00000602308 SLC12A5Q9H2X9 1139 aa20.57■□□□□ 0.88
TRIM11-205ENST00000602308 CNTNAP1P78357 1384 aa20.57■□□□□ 0.88
TRIM11-205ENST00000602308 ASAP1Q9ULH1 1129 aa20.56■□□□□ 0.88
TRIM11-205ENST00000602308 RTCBQ9Y3I0 505 aaKnown RBP20.56■□□□□ 0.88
TRIM11-205ENST00000602308 WBP1LQ9NX94 342 aa20.54■□□□□ 0.88
TRIM11-205ENST00000602308 LMNB1P20700 586 aa20.53■□□□□ 0.88
TRIM11-205ENST00000602308 A0A1W2PP64 1363 aa20.53■□□□□ 0.88
TRIM11-205ENST00000602308 CCDC85CA6NKD9 419 aa20.52■□□□□ 0.88
TRIM11-205ENST00000602308 VEGFBP49765 207 aa20.52■□□□□ 0.88
TRIM11-205ENST00000602308 HSPA8P11142 646 aaKnown RBP20.51■□□□□ 0.87
TRIM11-205ENST00000602308 NKX1-1Q15270 411 aaPredicted RBP20.51■□□□□ 0.87
TRIM11-205ENST00000602308 RFC4P35249 363 aa20.5■□□□□ 0.87
TRIM11-205ENST00000602308 RRS1Q15050 365 aaKnown RBP20.5■□□□□ 0.87
TRIM11-205ENST00000602308 CHADLQ6NUI6 762 aa20.5■□□□□ 0.87
TRIM11-205ENST00000602308 COG3Q96JB2 828 aa20.5■□□□□ 0.87
TRIM11-205ENST00000602308 POTEIP0CG38 1075 aa20.49■□□□□ 0.87
TRIM11-205ENST00000602308 POTEJP0CG39 1038 aa20.49■□□□□ 0.87
TRIM11-205ENST00000602308 ADRA2BP18089 450 aa20.49■□□□□ 0.87
TRIM11-205ENST00000602308 SLC4A9Q96Q91 983 aa20.49■□□□□ 0.87
TRIM11-205ENST00000602308 RTL1A6NKG5 1358 aa20.48■□□□□ 0.87
TRIM11-205ENST00000602308 DDR1Q08345 913 aa20.48■□□□□ 0.87
TRIM11-205ENST00000602308 ATG3Q9NT62 314 aa20.48■□□□□ 0.87
TRIM11-205ENST00000602308 TERF2IPQ9NYB0 399 aa20.48■□□□□ 0.87
TRIM11-205ENST00000602308 TMOD3Q9NYL9 352 aa20.48■□□□□ 0.87
TRIM11-205ENST00000602308 RC3H1Q5TC82 1133 aaKnown RBP20.46■□□□□ 0.87
TRIM11-205ENST00000602308 KDRP35968 1356 aa20.46■□□□□ 0.87
TRIM11-205ENST00000602308 RPS6KA4O75676 772 aa20.45■□□□□ 0.86
TRIM11-205ENST00000602308 PASKQ96RG2 1323 aa20.45■□□□□ 0.86
TRIM11-205ENST00000602308 SMG6Q86US8 1419 aaKnown RBP20.44■□□□□ 0.86
TRIM11-205ENST00000602308 FKBP8Q14318 412 aa20.44■□□□□ 0.86
TRIM11-205ENST00000602308 HSP90AB2PQ58FF8 381 aa20.44■□□□□ 0.86
TRIM11-205ENST00000602308 ROCK2O75116 1388 aaKnown RBP20.44■□□□□ 0.86
TRIM11-205ENST00000602308 DPY19L2Q6NUT2 758 aa20.43■□□□□ 0.86
TRIM11-205ENST00000602308 SRP68Q9UHB9 627 aaKnown RBP20.43■□□□□ 0.86
TRIM11-205ENST00000602308 TIAM2Q8IVF5 1701 aa20.42■□□□□ 0.86
TRIM11-205ENST00000602308 NFKBIEO00221 500 aa20.42■□□□□ 0.86
TRIM11-205ENST00000602308 CNTNAP4Q9C0A0 1308 aa20.42■□□□□ 0.86
TRIM11-205ENST00000602308 VIRMAQ69YN4 1812 aaKnown RBP20.41■□□□□ 0.86
TRIM11-205ENST00000602308 L3MBTL2Q969R5 705 aa20.41■□□□□ 0.86
TRIM11-205ENST00000602308 TNRC18O15417 2968 aaPredicted RBP20.4■□□□□ 0.86
TRIM11-205ENST00000602308 POLRMTO00411 1230 aaKnown RBP20.4■□□□□ 0.86
TRIM11-205ENST00000602308 INSRP06213 1382 aa20.39■□□□□ 0.85
TRIM11-205ENST00000602308 TMEM88BA6NKF7 163 aa20.39■□□□□ 0.85
TRIM11-205ENST00000602308 RBM42Q9BTD8 480 aaKnown RBP20.39■□□□□ 0.85
TRIM11-205ENST00000602308 CCDC88AQ3V6T2 1871 aa20.39■□□□□ 0.85
TRIM11-205ENST00000602308 SPG7Q9UQ90 795 aa20.38■□□□□ 0.85
TRIM11-205ENST00000602308 USP42Q9H9J4 1324 aaKnown RBP20.37■□□□□ 0.85
TRIM11-205ENST00000602308 TM4SF1P30408 202 aa20.37■□□□□ 0.85
TRIM11-205ENST00000602308 MYH14Q7Z406 1995 aaKnown RBP20.36■□□□□ 0.85
TRIM11-205ENST00000602308 COL5A3P25940 1745 aaPredicted RBP20.36■□□□□ 0.85
TRIM11-205ENST00000602308 ITGBL1O95965 494 aaPredicted RBP20.35■□□□□ 0.85
TRIM11-205ENST00000602308 MAP2K1Q02750 393 aaPredicted RBP20.35■□□□□ 0.85
TRIM11-205ENST00000602308 TTLL6Q8N841 843 aa20.35■□□□□ 0.85
TRIM11-205ENST00000602308 RASSF10A6NK89 507 aa20.34■□□□□ 0.85
TRIM11-205ENST00000602308 DDNO94850 711 aaPredicted RBP20.34■□□□□ 0.85
TRIM11-205ENST00000602308 PHKG2P15735 406 aa20.34■□□□□ 0.85
TRIM11-205ENST00000602308 ERFEQ4G0M1 354 aa20.34■□□□□ 0.85
TRIM11-205ENST00000602308 CFAP44Q96MT7 982 aa20.34■□□□□ 0.85
TRIM11-205ENST00000602308 PDE4DIPQ5VU43 2346 aa20.34■□□□□ 0.85
TRIM11-205ENST00000602308 ZNF831Q5JPB2 1677 aa20.33■□□□□ 0.85
TRIM11-205ENST00000602308 DEFB115Q30KQ5 88 aa20.33■□□□□ 0.85
TRIM11-205ENST00000602308 LDHDQ86WU2 507 aa20.33■□□□□ 0.85
TRIM11-205ENST00000602308 WDR33Q9C0J8 1336 aaKnown RBP20.32■□□□□ 0.84
TRIM11-205ENST00000602308 IFNL2Q8IZJ0 200 aa20.32■□□□□ 0.84
TRIM11-205ENST00000602308 GGNBP2Q9H3C7 697 aa20.32■□□□□ 0.84
TRIM11-205ENST00000602308 NCAPD2Q15021 1401 aa20.32■□□□□ 0.84
TRIM11-205ENST00000602308 FLT4P35916 1363 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms