RNA–Protein interactions for RNA: ENST00000602287.5

SFXN2-204, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-204ENST00000602287 LINC00116Q8NCU8 138 aa20.82■□□□□ 0.92
SFXN2-204ENST00000602287 COL5A3P25940 1745 aaPredicted RBP20.81■□□□□ 0.92
SFXN2-204ENST00000602287 ATP6V1AP38606 617 aa20.81■□□□□ 0.92
SFXN2-204ENST00000602287 ATG3Q9NT62 314 aa20.81■□□□□ 0.92
SFXN2-204ENST00000602287 KDRP35968 1356 aa20.81■□□□□ 0.92
SFXN2-204ENST00000602287 PHF14O94880 888 aa20.8■□□□□ 0.92
SFXN2-204ENST00000602287 AMIGO3Q86WK7 504 aa20.8■□□□□ 0.92
SFXN2-204ENST00000602287 ITPK1Q13572 414 aa20.79■□□□□ 0.92
SFXN2-204ENST00000602287 GNPATO15228 680 aa20.78■□□□□ 0.92
SFXN2-204ENST00000602287 YBX3P16989 372 aaKnown RBP eCLIP20.78■□□□□ 0.92
SFXN2-204ENST00000602287 ZNF530Q6P9A1 599 aaPredicted RBP20.78■□□□□ 0.92
SFXN2-204ENST00000602287 KDM6AO15550 1401 aaPredicted RBP20.78■□□□□ 0.92
SFXN2-204ENST00000602287 SCN11AQ9UI33 1791 aa20.77■□□□□ 0.91
SFXN2-204ENST00000602287 C1orf141Q5JVX7 400 aa20.76■□□□□ 0.91
SFXN2-204ENST00000602287 CICQ96RK0 1608 aaPredicted RBP20.75■□□□□ 0.91
SFXN2-204ENST00000602287 CABP4P57796 275 aa20.75■□□□□ 0.91
SFXN2-204ENST00000602287 KIF13BQ9NQT8 1826 aa20.74■□□□□ 0.91
SFXN2-204ENST00000602287 AMER1Q5JTC6 1135 aaPredicted RBP20.74■□□□□ 0.91
SFXN2-204ENST00000602287 RC3H1Q5TC82 1133 aaKnown RBP20.74■□□□□ 0.91
SFXN2-204ENST00000602287 RTCBQ9Y3I0 505 aaKnown RBP20.74■□□□□ 0.91
SFXN2-204ENST00000602287 ADRA2BP18089 450 aa20.73■□□□□ 0.91
SFXN2-204ENST00000602287 MTHFSP49914 203 aa20.73■□□□□ 0.91
SFXN2-204ENST00000602287 SULT6B1Q6IMI4 303 aa20.73■□□□□ 0.91
SFXN2-204ENST00000602287 AEBP1Q8IUX7 1158 aa20.73■□□□□ 0.91
SFXN2-204ENST00000602287 RBM42Q9BTD8 480 aaKnown RBP20.73■□□□□ 0.91
SFXN2-204ENST00000602287 KIF7Q2M1P5 1343 aa20.73■□□□□ 0.91
SFXN2-204ENST00000602287 CNTNAP4Q9C0A0 1308 aa20.73■□□□□ 0.91
SFXN2-204ENST00000602287 VIRMAQ69YN4 1812 aaKnown RBP20.72■□□□□ 0.91
SFXN2-204ENST00000602287 IL13P35225 146 aa20.72■□□□□ 0.91
SFXN2-204ENST00000602287 SMIM5Q71RC9 77 aa20.72■□□□□ 0.91
SFXN2-204ENST00000602287 C4AP0C0L4 1744 aa20.72■□□□□ 0.91
SFXN2-204ENST00000602287 MYH14Q7Z406 1995 aaKnown RBP20.72■□□□□ 0.91
SFXN2-204ENST00000602287 ZEB1P37275 1124 aaPredicted RBP20.71■□□□□ 0.91
SFXN2-204ENST00000602287 C1QTNF8P60827 252 aa20.71■□□□□ 0.91
SFXN2-204ENST00000602287 TRAPPC3LQ5T215 181 aa20.71■□□□□ 0.91
SFXN2-204ENST00000602287 SLC4A9Q96Q91 983 aa20.71■□□□□ 0.91
SFXN2-204ENST00000602287 GIGYF1O75420 1035 aaPredicted RBP20.69■□□□□ 0.9
SFXN2-204ENST00000602287 NLGN1Q8N2Q7 840 aa20.69■□□□□ 0.9
SFXN2-204ENST00000602287 TJP1Q07157 1748 aa20.69■□□□□ 0.9
SFXN2-204ENST00000602287 RPS6KA4O75676 772 aa20.68■□□□□ 0.9
SFXN2-204ENST00000602287 MMP10P09238 476 aa20.67■□□□□ 0.9
SFXN2-204ENST00000602287 AKAP4Q5JQC9 854 aa20.67■□□□□ 0.9
SFXN2-204ENST00000602287 NFATC2IPQ8NCF5 419 aa20.67■□□□□ 0.9
SFXN2-204ENST00000602287 KIAA1551Q9HCM1 1747 aa20.67■□□□□ 0.9
SFXN2-204ENST00000602287 RFC4P35249 363 aa20.66■□□□□ 0.9
SFXN2-204ENST00000602287 MRC1P22897 1456 aa20.65■□□□□ 0.9
SFXN2-204ENST00000602287 PER1O15534 1290 aaPredicted RBP20.65■□□□□ 0.9
SFXN2-204ENST00000602287 PTCD1O75127 700 aaKnown RBP20.65■□□□□ 0.9
SFXN2-204ENST00000602287 ARHGEF1Q92888 912 aaKnown RBP20.65■□□□□ 0.9
SFXN2-204ENST00000602287 ADAMTS7Q9UKP4 1686 aa20.64■□□□□ 0.9
SFXN2-204ENST00000602287 C10orf71Q711Q0 1435 aa20.64■□□□□ 0.89
SFXN2-204ENST00000602287 ATP10DQ9P241 1426 aa20.64■□□□□ 0.89
SFXN2-204ENST00000602287 ADCY9O60503 1353 aa20.64■□□□□ 0.89
SFXN2-204ENST00000602287 NPC1L1Q9UHC9 1359 aa20.64■□□□□ 0.89
SFXN2-204ENST00000602287 N4BP2Q86UW6 1770 aaPredicted RBP20.64■□□□□ 0.89
SFXN2-204ENST00000602287 PXDNLA1KZ92 1463 aa20.63■□□□□ 0.89
SFXN2-204ENST00000602287 GYS1P13807 737 aa20.63■□□□□ 0.89
SFXN2-204ENST00000602287 TGFB2P61812 414 aa20.63■□□□□ 0.89
SFXN2-204ENST00000602287 SENP3-EIF4A1A0A087X0R7 540 aa20.62■□□□□ 0.89
SFXN2-204ENST00000602287 CRKLP46109 303 aaKnown RBP20.62■□□□□ 0.89
SFXN2-204ENST00000602287 CCDC87Q9NVE4 849 aa20.62■□□□□ 0.89
SFXN2-204ENST00000602287 BRCA1P38398 1863 aaKnown RBP20.62■□□□□ 0.89
SFXN2-204ENST00000602287 DIAPH1O60610 1272 aaKnown RBP20.61■□□□□ 0.89
SFXN2-204ENST00000602287 SLC52A2Q9HAB3 445 aa20.61■□□□□ 0.89
SFXN2-204ENST00000602287 PARP3Q9Y6F1 533 aa20.6■□□□□ 0.89
SFXN2-204ENST00000602287 HMOX1P09601 288 aa20.59■□□□□ 0.89
SFXN2-204ENST00000602287 CC2D1BQ5T0F9 858 aaKnown RBP20.59■□□□□ 0.89
SFXN2-204ENST00000602287 CEP350Q5VT06 3117 aa20.59■□□□□ 0.89
SFXN2-204ENST00000602287 GPBP1L1Q9HC44 474 aaPredicted RBP20.58■□□□□ 0.89
SFXN2-204ENST00000602287 UBR2Q8IWV8 1755 aa20.58■□□□□ 0.89
SFXN2-204ENST00000602287 ARFGEF1Q9Y6D6 1849 aa20.57■□□□□ 0.88
SFXN2-204ENST00000602287 USP42Q9H9J4 1324 aaKnown RBP20.57■□□□□ 0.88
SFXN2-204ENST00000602287 COL3A1P02461 1466 aaPredicted RBP20.57■□□□□ 0.88
SFXN2-204ENST00000602287 RNMTO43148 476 aaKnown RBP20.57■□□□□ 0.88
SFXN2-204ENST00000602287 WWC3Q9ULE0 1092 aa20.57■□□□□ 0.88
SFXN2-204ENST00000602287 LGR6Q9HBX8 967 aa20.56■□□□□ 0.88
SFXN2-204ENST00000602287 KCPQ6ZWJ8 1503 aa20.56■□□□□ 0.88
SFXN2-204ENST00000602287 MTHFSDQ2M296 383 aaKnown RBP20.55■□□□□ 0.88
SFXN2-204ENST00000602287 INTS5Q6P9B9 1019 aaKnown RBP20.55■□□□□ 0.88
SFXN2-204ENST00000602287 A0A0G2JLW4 131 aa20.53■□□□□ 0.88
SFXN2-204ENST00000602287 DNAJC10Q8IXB1 793 aa20.53■□□□□ 0.88
SFXN2-204ENST00000602287 VSIG10Q8N0Z9 540 aa20.53■□□□□ 0.88
SFXN2-204ENST00000602287 BCS1LQ9Y276 419 aa20.53■□□□□ 0.88
SFXN2-204ENST00000602287 SIPA1L3O60292 1781 aaPredicted RBP20.52■□□□□ 0.88
SFXN2-204ENST00000602287 FKBP8Q14318 412 aa20.52■□□□□ 0.88
SFXN2-204ENST00000602287 SRP68Q9UHB9 627 aaKnown RBP20.52■□□□□ 0.88
SFXN2-204ENST00000602287 SOS1Q07889 1333 aaPredicted RBP20.52■□□□□ 0.87
SFXN2-204ENST00000602287 ZPR1O75312 459 aa20.51■□□□□ 0.87
SFXN2-204ENST00000602287 CYP19A1P11511 503 aaPredicted RBP20.51■□□□□ 0.87
SFXN2-204ENST00000602287 DPEP1P16444 411 aa20.51■□□□□ 0.87
SFXN2-204ENST00000602287 SLC39A6Q13433 755 aa20.5■□□□□ 0.87
SFXN2-204ENST00000602287 GAS2L2Q8NHY3 880 aa20.5■□□□□ 0.87
SFXN2-204ENST00000602287 COL15A1P39059 1388 aa20.49■□□□□ 0.87
SFXN2-204ENST00000602287 AFDNP55196 1824 aaKnown RBP20.49■□□□□ 0.87
SFXN2-204ENST00000602287 U2SURPO15042 1029 aaKnown RBP20.49■□□□□ 0.87
SFXN2-204ENST00000602287 FCHSD2O94868 740 aa20.49■□□□□ 0.87
SFXN2-204ENST00000602287 ZNF526Q8TF50 670 aaPredicted RBP20.49■□□□□ 0.87
SFXN2-204ENST00000602287 NRXN2Q9P2S2 1712 aa20.49■□□□□ 0.87
SFXN2-204ENST00000602287 DDR1Q08345 913 aa20.48■□□□□ 0.87
SFXN2-204ENST00000602287 TTC5Q8N0Z6 440 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms