RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 TWISTNBQ3B726 338 aaPredicted RBP18.51■□□□□ 0.55
ZNF548-212ENST00000602086 DEFB132Q7Z7B7 95 aa18.51■□□□□ 0.55
ZNF548-212ENST00000602086 ZCRB1Q8TBF4 217 aaKnown RBP18.51■□□□□ 0.55
ZNF548-212ENST00000602086 CDCA7Q9BWT1 371 aaPredicted RBP18.51■□□□□ 0.55
ZNF548-212ENST00000602086 THRAP3Q9Y2W1 955 aaKnown RBP18.51■□□□□ 0.55
ZNF548-212ENST00000602086 SHANK3Q9BYB0 1731 aa18.51■□□□□ 0.55
ZNF548-212ENST00000602086 TEFQ10587 303 aa18.5■□□□□ 0.55
ZNF548-212ENST00000602086 NKX1-1Q15270 411 aaPredicted RBP18.5■□□□□ 0.55
ZNF548-212ENST00000602086 DCAF5Q96JK2 942 aa18.5■□□□□ 0.55
ZNF548-212ENST00000602086 CYP27B1O15528 508 aa18.49■□□□□ 0.55
ZNF548-212ENST00000602086 MS4A1P11836 297 aa18.49■□□□□ 0.55
ZNF548-212ENST00000602086 C8orf58Q8NAV2 365 aa18.49■□□□□ 0.55
ZNF548-212ENST00000602086 LGR6Q9HBX8 967 aa18.49■□□□□ 0.55
ZNF548-212ENST00000602086 CCDC9Q9Y3X0 531 aaKnown RBP18.49■□□□□ 0.55
ZNF548-212ENST00000602086 SRCAPQ6ZRS2 3230 aa18.49■□□□□ 0.55
ZNF548-212ENST00000602086 KDM6AO15550 1401 aaPredicted RBP18.49■□□□□ 0.55
ZNF548-212ENST00000602086 MPRIPQ6WCQ1 1025 aa18.48■□□□□ 0.55
ZNF548-212ENST00000602086 SSH1Q8WYL5 1049 aa18.48■□□□□ 0.55
ZNF548-212ENST00000602086 CHMP4AQ9BY43 222 aa18.48■□□□□ 0.55
ZNF548-212ENST00000602086 PPP4R2Q9NY27 417 aa18.48■□□□□ 0.55
ZNF548-212ENST00000602086 KIF16BQ96L93 1317 aa18.48■□□□□ 0.55
ZNF548-212ENST00000602086 HOXB7P09629 217 aa18.47■□□□□ 0.55
ZNF548-212ENST00000602086 CCDC125Q86Z20 511 aa18.47■□□□□ 0.55
ZNF548-212ENST00000602086 SEPT12Q8IYM1 358 aa18.47■□□□□ 0.55
ZNF548-212ENST00000602086 TSPYL6Q8N831 410 aa18.47■□□□□ 0.55
ZNF548-212ENST00000602086 CACNA1FO60840 1977 aa18.46■□□□□ 0.55
ZNF548-212ENST00000602086 IRX6P78412 446 aaPredicted RBP18.46■□□□□ 0.55
ZNF548-212ENST00000602086 SMC4Q9NTJ3 1288 aa18.46■□□□□ 0.55
ZNF548-212ENST00000602086 SPATA31A1Q5TZJ5 1347 aa18.46■□□□□ 0.55
ZNF548-212ENST00000602086 A0A0G2JS52 829 aa18.45■□□□□ 0.54
ZNF548-212ENST00000602086 IPO8O15397 1037 aaKnown RBP18.45■□□□□ 0.54
ZNF548-212ENST00000602086 PLIN1O60240 522 aa18.45■□□□□ 0.54
ZNF548-212ENST00000602086 MYT1Q01538 1121 aa18.45■□□□□ 0.54
ZNF548-212ENST00000602086 ARHGAP45Q92619 1136 aa18.45■□□□□ 0.54
ZNF548-212ENST00000602086 SLC52A2Q9HAB3 445 aa18.45■□□□□ 0.54
ZNF548-212ENST00000602086 SPATA31A5Q5VU36 1347 aa18.45■□□□□ 0.54
ZNF548-212ENST00000602086 SPATA31A7Q8IWB4 1347 aa18.45■□□□□ 0.54
ZNF548-212ENST00000602086 LRP5O75197 1615 aa18.45■□□□□ 0.54
ZNF548-212ENST00000602086 ZKSCAN2Q63HK3 967 aa18.44■□□□□ 0.54
ZNF548-212ENST00000602086 BARGINQ6ZT62 677 aa18.44■□□□□ 0.54
ZNF548-212ENST00000602086 BTBD11A6QL63 1104 aa18.43■□□□□ 0.54
ZNF548-212ENST00000602086 ERVV-2B6SEH9 535 aa18.43■□□□□ 0.54
ZNF548-212ENST00000602086 AAMPQ13685 434 aa18.43■□□□□ 0.54
ZNF548-212ENST00000602086 VPS72Q15906 364 aa18.43■□□□□ 0.54
ZNF548-212ENST00000602086 MRPL50Q8N5N7 158 aaKnown RBP18.43■□□□□ 0.54
ZNF548-212ENST00000602086 MIS18AQ9NYP9 233 aa18.43■□□□□ 0.54
ZNF548-212ENST00000602086 HEG1Q9ULI3 1381 aa18.42■□□□□ 0.54
ZNF548-212ENST00000602086 CANXP27824 592 aaKnown RBP18.42■□□□□ 0.54
ZNF548-212ENST00000602086 EIF4A1P60842 406 aaKnown RBP18.42■□□□□ 0.54
ZNF548-212ENST00000602086 SF3B2Q13435 895 aaKnown RBP18.42■□□□□ 0.54
ZNF548-212ENST00000602086 TNS2Q63HR2 1409 aa18.41■□□□□ 0.54
ZNF548-212ENST00000602086 TNS1Q9HBL0 1735 aaKnown RBP18.41■□□□□ 0.54
ZNF548-212ENST00000602086 ELL2O00472 640 aaPredicted RBP18.4■□□□□ 0.54
ZNF548-212ENST00000602086 C20orf194Q5TEA3 1177 aa18.4■□□□□ 0.54
ZNF548-212ENST00000602086 ATF7IPQ6VMQ6 1270 aa18.4■□□□□ 0.54
ZNF548-212ENST00000602086 KRT27Q7Z3Y8 459 aa18.4■□□□□ 0.54
ZNF548-212ENST00000602086 PSDA5PKW4 1024 aaPredicted RBP18.39■□□□□ 0.53
ZNF548-212ENST00000602086 EXOC6Q8TAG9 804 aa18.39■□□□□ 0.53
ZNF548-212ENST00000602086 FRAT1Q92837 279 aaPredicted RBP18.39■□□□□ 0.53
ZNF548-212ENST00000602086 CRBNQ96SW2 442 aa18.39■□□□□ 0.53
ZNF548-212ENST00000602086 BCL2L13Q9BXK5 485 aa18.39■□□□□ 0.53
ZNF548-212ENST00000602086 EXOC5O00471 708 aa18.38■□□□□ 0.53
ZNF548-212ENST00000602086 FAM98CQ17RN3 349 aaKnown RBP18.38■□□□□ 0.53
ZNF548-212ENST00000602086 KRT24Q2M2I5 525 aa18.38■□□□□ 0.53
ZNF548-212ENST00000602086 CCDC30Q5VVM6 783 aa18.38■□□□□ 0.53
ZNF548-212ENST00000602086 USP35Q9P2H5 1018 aa18.38■□□□□ 0.53
ZNF548-212ENST00000602086 NOB1Q9ULX3 412 aaKnown RBP18.38■□□□□ 0.53
ZNF548-212ENST00000602086 THSD7AQ9UPZ6 1657 aa18.38■□□□□ 0.53
ZNF548-212ENST00000602086 CABP4P57796 275 aa18.37■□□□□ 0.53
ZNF548-212ENST00000602086 FAM182BQ5T319 152 aa18.37■□□□□ 0.53
ZNF548-212ENST00000602086 DZIP1LQ8IYY4 767 aaKnown RBP18.37■□□□□ 0.53
ZNF548-212ENST00000602086 PTPRCP08575 1304 aa18.37■□□□□ 0.53
ZNF548-212ENST00000602086 PAPPAQ13219 1627 aa18.37■□□□□ 0.53
ZNF548-212ENST00000602086 TRIM27P14373 513 aa18.36■□□□□ 0.53
ZNF548-212ENST00000602086 ZNF790Q6PG37 636 aa18.36■□□□□ 0.53
ZNF548-212ENST00000602086 NFATC2IPQ8NCF5 419 aa18.36■□□□□ 0.53
ZNF548-212ENST00000602086 API5Q9BZZ5 524 aaKnown RBP18.36■□□□□ 0.53
ZNF548-212ENST00000602086 TOGARAM1Q9Y4F4 1720 aa18.35■□□□□ 0.53
ZNF548-212ENST00000602086 DDX54Q8TDD1 881 aaKnown RBP18.35■□□□□ 0.53
ZNF548-212ENST00000602086 STK31Q9BXU1 1019 aa18.35■□□□□ 0.53
ZNF548-212ENST00000602086 UBR2Q8IWV8 1755 aa18.35■□□□□ 0.53
ZNF548-212ENST00000602086 GIGYF1O75420 1035 aaPredicted RBP18.34■□□□□ 0.53
ZNF548-212ENST00000602086 FTSJ3Q8IY81 847 aaKnown RBP18.34■□□□□ 0.53
ZNF548-212ENST00000602086 KCNQ3O43525 872 aa18.33■□□□□ 0.52
ZNF548-212ENST00000602086 MVPQ14764 893 aaKnown RBP18.33■□□□□ 0.52
ZNF548-212ENST00000602086 DDB1Q16531 1140 aa18.33■□□□□ 0.52
ZNF548-212ENST00000602086 ABCC4O15439 1325 aa18.32■□□□□ 0.52
ZNF548-212ENST00000602086 ONECUT3O60422 494 aaPredicted RBP18.32■□□□□ 0.52
ZNF548-212ENST00000602086 RLBP1P12271 317 aa18.32■□□□□ 0.52
ZNF548-212ENST00000602086 PANK1Q8TE04 598 aa18.32■□□□□ 0.52
ZNF548-212ENST00000602086 CHMP4BQ9H444 224 aaKnown RBP18.32■□□□□ 0.52
ZNF548-212ENST00000602086 ITGB4P16144 1822 aa18.32■□□□□ 0.52
ZNF548-212ENST00000602086 SLC4A2P04920 1241 aa18.31■□□□□ 0.52
ZNF548-212ENST00000602086 BAG6P46379 1132 aa18.31■□□□□ 0.52
ZNF548-212ENST00000602086 HDGFL1Q5TGJ6 251 aa18.31■□□□□ 0.52
ZNF548-212ENST00000602086 TTC5Q8N0Z6 440 aa18.31■□□□□ 0.52
ZNF548-212ENST00000602086 FMNL2Q96PY5 1086 aa18.31■□□□□ 0.52
ZNF548-212ENST00000602086 DDX19BQ9UMR2 479 aa18.31■□□□□ 0.52
ZNF548-212ENST00000602086 EN1Q05925 392 aaPredicted RBP18.3■□□□□ 0.52
ZNF548-212ENST00000602086 CCDC136Q96JN2 1154 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms