RNA–Protein interactions for RNA: ENST00000601415.5

ZNF550-208, Transcript of zinc finger protein 550, humanhuman

TSL 4 BASIC

Gene ZNF550, Length 515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-208ENST00000601415 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.85■■□□□ 1.09
ZNF550-208ENST00000601415 LINC00116Q8NCU8 138 aa21.85■■□□□ 1.09
ZNF550-208ENST00000601415 C5P01031 1676 aa21.85■■□□□ 1.09
ZNF550-208ENST00000601415 TUBGCP6Q96RT7 1819 aa21.85■■□□□ 1.09
ZNF550-208ENST00000601415 DIAPH1O60610 1272 aaKnown RBP21.84■■□□□ 1.09
ZNF550-208ENST00000601415 GNPATO15228 680 aa21.83■■□□□ 1.09
ZNF550-208ENST00000601415 HMOX1P09601 288 aa21.83■■□□□ 1.09
ZNF550-208ENST00000601415 SSFA2P28290 1259 aa21.83■■□□□ 1.09
ZNF550-208ENST00000601415 ITPK1Q13572 414 aa21.83■■□□□ 1.09
ZNF550-208ENST00000601415 SMIM5Q71RC9 77 aa21.82■■□□□ 1.08
ZNF550-208ENST00000601415 NFATC2IPQ8NCF5 419 aa21.81■■□□□ 1.08
ZNF550-208ENST00000601415 C4BP0C0L5 1744 aa21.8■■□□□ 1.08
ZNF550-208ENST00000601415 TAF1LQ8IZX4 1826 aa21.8■■□□□ 1.08
ZNF550-208ENST00000601415 AKAP4Q5JQC9 854 aa21.8■■□□□ 1.08
ZNF550-208ENST00000601415 KDRP35968 1356 aa21.79■■□□□ 1.08
ZNF550-208ENST00000601415 PTCD1O75127 700 aaKnown RBP21.79■■□□□ 1.08
ZNF550-208ENST00000601415 TRAPPC3LQ5T215 181 aa21.79■■□□□ 1.08
ZNF550-208ENST00000601415 NLGN2Q8NFZ4 835 aa21.79■■□□□ 1.08
ZNF550-208ENST00000601415 RTCBQ9Y3I0 505 aaKnown RBP21.79■■□□□ 1.08
ZNF550-208ENST00000601415 U2SURPO15042 1029 aaKnown RBP21.78■■□□□ 1.08
ZNF550-208ENST00000601415 AMIGO3Q86WK7 504 aa21.78■■□□□ 1.08
ZNF550-208ENST00000601415 CD2APQ9Y5K6 639 aa21.77■■□□□ 1.08
ZNF550-208ENST00000601415 KDM6AO15550 1401 aaPredicted RBP21.77■■□□□ 1.08
ZNF550-208ENST00000601415 NPC1L1Q9UHC9 1359 aa21.75■■□□□ 1.07
ZNF550-208ENST00000601415 RC3H1Q5TC82 1133 aaKnown RBP21.75■■□□□ 1.07
ZNF550-208ENST00000601415 GRIN3BO60391 1043 aa21.74■■□□□ 1.07
ZNF550-208ENST00000601415 CFAP53Q96M91 514 aa21.74■■□□□ 1.07
ZNF550-208ENST00000601415 SLC4A9Q96Q91 983 aa21.74■■□□□ 1.07
ZNF550-208ENST00000601415 COL24A1Q17RW2 1714 aa21.74■■□□□ 1.07
ZNF550-208ENST00000601415 RFC4P35249 363 aa21.73■■□□□ 1.07
ZNF550-208ENST00000601415 LGR6Q9HBX8 967 aa21.73■■□□□ 1.07
ZNF550-208ENST00000601415 RNMTO43148 476 aaKnown RBP21.72■■□□□ 1.07
ZNF550-208ENST00000601415 MTHFSDQ2M296 383 aaKnown RBP21.72■■□□□ 1.07
ZNF550-208ENST00000601415 SLC52A2Q9HAB3 445 aa21.72■■□□□ 1.07
ZNF550-208ENST00000601415 RPS6KA4O75676 772 aa21.71■■□□□ 1.07
ZNF550-208ENST00000601415 ADRA2BP18089 450 aa21.71■■□□□ 1.07
ZNF550-208ENST00000601415 UBR3Q6ZT12 1888 aa21.71■■□□□ 1.07
ZNF550-208ENST00000601415 NLGN1Q8N2Q7 840 aa21.7■■□□□ 1.06
ZNF550-208ENST00000601415 ARHGEF1Q92888 912 aaKnown RBP21.7■■□□□ 1.06
ZNF550-208ENST00000601415 CNTNAP4Q9C0A0 1308 aa21.7■■□□□ 1.06
ZNF550-208ENST00000601415 MMP10P09238 476 aa21.69■■□□□ 1.06
ZNF550-208ENST00000601415 ZNF784Q8NCA9 323 aaPredicted RBP21.69■■□□□ 1.06
ZNF550-208ENST00000601415 NUDCQ9Y266 331 aa21.69■■□□□ 1.06
ZNF550-208ENST00000601415 CRKLP46109 303 aaKnown RBP21.67■■□□□ 1.06
ZNF550-208ENST00000601415 GAS2L2Q8NHY3 880 aa21.67■■□□□ 1.06
ZNF550-208ENST00000601415 CHD4Q14839 1912 aa21.67■■□□□ 1.06
ZNF550-208ENST00000601415 YBX3P16989 372 aaKnown RBP eCLIP21.66■■□□□ 1.06
ZNF550-208ENST00000601415 SLC39A6Q13433 755 aa21.66■■□□□ 1.06
ZNF550-208ENST00000601415 GNAT3A8MTJ3 354 aa21.64■■□□□ 1.05
ZNF550-208ENST00000601415 TEFQ10587 303 aa21.64■■□□□ 1.05
ZNF550-208ENST00000601415 DNAJC10Q8IXB1 793 aa21.64■■□□□ 1.05
ZNF550-208ENST00000601415 TTC5Q8N0Z6 440 aa21.64■■□□□ 1.05
ZNF550-208ENST00000601415 WWC3Q9ULE0 1092 aa21.64■■□□□ 1.05
ZNF550-208ENST00000601415 PARP3Q9Y6F1 533 aa21.64■■□□□ 1.05
ZNF550-208ENST00000601415 SCN11AQ9UI33 1791 aa21.62■■□□□ 1.05
ZNF550-208ENST00000601415 U2AF1L5P0DN76 240 aaPredicted RBP21.62■■□□□ 1.05
ZNF550-208ENST00000601415 GYS1P13807 737 aa21.62■■□□□ 1.05
ZNF550-208ENST00000601415 PPP2R1AP30153 589 aa21.62■■□□□ 1.05
ZNF550-208ENST00000601415 U2AF1Q01081 240 aaKnown RBP eCLIP21.62■■□□□ 1.05
ZNF550-208ENST00000601415 CCDC87Q9NVE4 849 aa21.62■■□□□ 1.05
ZNF550-208ENST00000601415 ZNF831Q5JPB2 1677 aa21.61■■□□□ 1.05
ZNF550-208ENST00000601415 ZPR1O75312 459 aa21.61■■□□□ 1.05
ZNF550-208ENST00000601415 UTRNP46939 3433 aa21.61■■□□□ 1.05
ZNF550-208ENST00000601415 PRKAR2BP31323 418 aa21.6■■□□□ 1.05
ZNF550-208ENST00000601415 INTS5Q6P9B9 1019 aaKnown RBP21.59■■□□□ 1.05
ZNF550-208ENST00000601415 SRP68Q9UHB9 627 aaKnown RBP21.59■■□□□ 1.05
ZNF550-208ENST00000601415 COL3A1P02461 1466 aaPredicted RBP21.58■■□□□ 1.05
ZNF550-208ENST00000601415 TGFB2P61812 414 aa21.58■■□□□ 1.05
ZNF550-208ENST00000601415 STARD3NLO95772 234 aa21.57■■□□□ 1.04
ZNF550-208ENST00000601415 CYP19A1P11511 503 aaPredicted RBP21.57■■□□□ 1.04
ZNF550-208ENST00000601415 VSIG10Q8N0Z9 540 aa21.57■■□□□ 1.04
ZNF550-208ENST00000601415 IL17REQ8NFR9 667 aa21.57■■□□□ 1.04
ZNF550-208ENST00000601415 PHACTR3Q96KR7 559 aa21.57■■□□□ 1.04
ZNF550-208ENST00000601415 MYH14Q7Z406 1995 aaKnown RBP21.56■■□□□ 1.04
ZNF550-208ENST00000601415 COL5A3P25940 1745 aaPredicted RBP21.56■■□□□ 1.04
ZNF550-208ENST00000601415 RTF1Q92541 710 aaKnown RBP21.56■■□□□ 1.04
ZNF550-208ENST00000601415 RSPH6AQ9H0K4 717 aa21.56■■□□□ 1.04
ZNF550-208ENST00000601415 USP42Q9H9J4 1324 aaKnown RBP21.55■■□□□ 1.04
ZNF550-208ENST00000601415 A0A0G2JLW4 131 aa21.55■■□□□ 1.04
ZNF550-208ENST00000601415 NEFMP07197 916 aa21.55■■□□□ 1.04
ZNF550-208ENST00000601415 FKBP8Q14318 412 aa21.55■■□□□ 1.04
ZNF550-208ENST00000601415 FCHSD2O94868 740 aa21.54■■□□□ 1.04
ZNF550-208ENST00000601415 CANXP27824 592 aaKnown RBP21.54■■□□□ 1.04
ZNF550-208ENST00000601415 USPL1Q5W0Q7 1092 aa21.54■■□□□ 1.04
ZNF550-208ENST00000601415 TEX13AQ9BXU3 409 aaPredicted RBP21.54■■□□□ 1.04
ZNF550-208ENST00000601415 MRC1P22897 1456 aa21.53■■□□□ 1.04
ZNF550-208ENST00000601415 ZNF790Q6PG37 636 aa21.53■■□□□ 1.04
ZNF550-208ENST00000601415 NPM2Q86SE8 214 aaKnown RBP21.53■■□□□ 1.04
ZNF550-208ENST00000601415 BCS1LQ9Y276 419 aa21.53■■□□□ 1.04
ZNF550-208ENST00000601415 SOS1Q07889 1333 aaPredicted RBP21.53■■□□□ 1.04
ZNF550-208ENST00000601415 BTBD11A6QL63 1104 aa21.52■■□□□ 1.04
ZNF550-208ENST00000601415 ZBTB1Q9Y2K1 713 aa21.52■■□□□ 1.04
ZNF550-208ENST00000601415 CICQ96RK0 1608 aaPredicted RBP21.51■■□□□ 1.03
ZNF550-208ENST00000601415 ZNF496Q96IT1 587 aaPredicted RBP21.51■■□□□ 1.03
ZNF550-208ENST00000601415 FMNL2Q96PY5 1086 aa21.51■■□□□ 1.03
ZNF550-208ENST00000601415 TJP1Q07157 1748 aa21.5■■□□□ 1.03
ZNF550-208ENST00000601415 GIGYF1O75420 1035 aaPredicted RBP21.5■■□□□ 1.03
ZNF550-208ENST00000601415 DPEP1P16444 411 aa21.5■■□□□ 1.03
ZNF550-208ENST00000601415 NARFQ9UHQ1 456 aa21.5■■□□□ 1.03
ZNF550-208ENST00000601415 ZNF330Q9Y3S2 320 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms