RNA–Protein interactions for RNA: ENST00000601361.1

FARP1-234, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2

Gene FARP1, Length 457 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-234ENST00000601361 GPBP1L1Q9HC44 474 aaPredicted RBP12.34□□□□□ -0.43
FARP1-234ENST00000601361 IGSF1Q8N6C5 1336 aa12.34□□□□□ -0.43
FARP1-234ENST00000601361 C4BP0C0L5 1744 aa12.34□□□□□ -0.43
FARP1-234ENST00000601361 PHKG2P15735 406 aa12.33□□□□□ -0.44
FARP1-234ENST00000601361 PLEKHO1Q53GL0 409 aaPredicted RBP12.33□□□□□ -0.44
FARP1-234ENST00000601361 N4BP2Q86UW6 1770 aaPredicted RBP12.33□□□□□ -0.44
FARP1-234ENST00000601361 NKX1-1Q15270 411 aaPredicted RBP12.32□□□□□ -0.44
FARP1-234ENST00000601361 AMER1Q5JTC6 1135 aaPredicted RBP12.32□□□□□ -0.44
FARP1-234ENST00000601361 CC2D1BQ5T0F9 858 aaKnown RBP12.32□□□□□ -0.44
FARP1-234ENST00000601361 PIGBQ92521 554 aa12.32□□□□□ -0.44
FARP1-234ENST00000601361 HSP90AB1P08238 724 aaKnown RBP12.31□□□□□ -0.44
FARP1-234ENST00000601361 C1orf141Q5JVX7 400 aa12.31□□□□□ -0.44
FARP1-234ENST00000601361 SULT6B1Q6IMI4 303 aa12.31□□□□□ -0.44
FARP1-234ENST00000601361 ZNF530Q6P9A1 599 aaPredicted RBP12.31□□□□□ -0.44
FARP1-234ENST00000601361 COL23A1Q86Y22 540 aaPredicted RBP12.31□□□□□ -0.44
FARP1-234ENST00000601361 AK7Q96M32 723 aa12.31□□□□□ -0.44
FARP1-234ENST00000601361 ARFGEF1Q9Y6D6 1849 aa12.31□□□□□ -0.44
FARP1-234ENST00000601361 PLEKHG2Q9H7P9 1386 aa12.3□□□□□ -0.44
FARP1-234ENST00000601361 KIF3CO14782 793 aa12.3□□□□□ -0.44
FARP1-234ENST00000601361 AMOTQ4VCS5 1084 aa12.3□□□□□ -0.44
FARP1-234ENST00000601361 AEBP1Q8IUX7 1158 aa12.3□□□□□ -0.44
FARP1-234ENST00000601361 CD2APQ9Y5K6 639 aa12.3□□□□□ -0.44
FARP1-234ENST00000601361 MTHFSP49914 203 aa12.29□□□□□ -0.44
FARP1-234ENST00000601361 DNAJC5GQ8N7S2 189 aa12.29□□□□□ -0.44
FARP1-234ENST00000601361 FLAD1Q8NFF5 587 aa12.29□□□□□ -0.44
FARP1-234ENST00000601361 SBF1O95248 1867 aa12.28□□□□□ -0.44
FARP1-234ENST00000601361 LOC102724428A0A0B4J2F2 783 aa12.28□□□□□ -0.44
FARP1-234ENST00000601361 SIK1P57059 783 aa12.28□□□□□ -0.44
FARP1-234ENST00000601361 CABP4P57796 275 aa12.28□□□□□ -0.44
FARP1-234ENST00000601361 ZNF526Q8TF50 670 aaPredicted RBP12.28□□□□□ -0.44
FARP1-234ENST00000601361 DCAF5Q96JK2 942 aa12.28□□□□□ -0.44
FARP1-234ENST00000601361 ERVV-2B6SEH9 535 aa12.27□□□□□ -0.45
FARP1-234ENST00000601361 PHF14O94880 888 aa12.27□□□□□ -0.45
FARP1-234ENST00000601361 IL13P35225 146 aa12.27□□□□□ -0.45
FARP1-234ENST00000601361 ATP6V1AP38606 617 aa12.27□□□□□ -0.45
FARP1-234ENST00000601361 MSL1Q68DK7 614 aa12.27□□□□□ -0.45
FARP1-234ENST00000601361 RBM42Q9BTD8 480 aaKnown RBP12.27□□□□□ -0.45
FARP1-234ENST00000601361 ASAP1Q9ULH1 1129 aa12.27□□□□□ -0.45
FARP1-234ENST00000601361 PER1O15534 1290 aaPredicted RBP12.26□□□□□ -0.45
FARP1-234ENST00000601361 DIAPH1O60610 1272 aaKnown RBP12.26□□□□□ -0.45
FARP1-234ENST00000601361 HMOX1P09601 288 aa12.25□□□□□ -0.45
FARP1-234ENST00000601361 APLP1P51693 650 aa12.25□□□□□ -0.45
FARP1-234ENST00000601361 ATG3Q9NT62 314 aa12.25□□□□□ -0.45
FARP1-234ENST00000601361 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.24□□□□□ -0.45
FARP1-234ENST00000601361 U2SURPO15042 1029 aaKnown RBP12.24□□□□□ -0.45
FARP1-234ENST00000601361 GNPATO15228 680 aa12.24□□□□□ -0.45
FARP1-234ENST00000601361 KDRP35968 1356 aa12.24□□□□□ -0.45
FARP1-234ENST00000601361 LINC00116Q8NCU8 138 aa12.24□□□□□ -0.45
FARP1-234ENST00000601361 TNRC6CQ9HCJ0 1690 aaKnown RBP12.24□□□□□ -0.45
FARP1-234ENST00000601361 KDM6AO15550 1401 aaPredicted RBP12.23□□□□□ -0.45
FARP1-234ENST00000601361 ITPK1Q13572 414 aa12.23□□□□□ -0.45
FARP1-234ENST00000601361 AMIGO3Q86WK7 504 aa12.23□□□□□ -0.45
FARP1-234ENST00000601361 C4AP0C0L4 1744 aa12.23□□□□□ -0.45
FARP1-234ENST00000601361 NPC1L1Q9UHC9 1359 aa12.22□□□□□ -0.45
FARP1-234ENST00000601361 SSFA2P28290 1259 aa12.22□□□□□ -0.45
FARP1-234ENST00000601361 AKAP4Q5JQC9 854 aa12.22□□□□□ -0.45
FARP1-234ENST00000601361 NFATC2IPQ8NCF5 419 aa12.22□□□□□ -0.45
FARP1-234ENST00000601361 CFAP53Q96M91 514 aa12.22□□□□□ -0.45
FARP1-234ENST00000601361 COL5A3P25940 1745 aaPredicted RBP12.22□□□□□ -0.45
FARP1-234ENST00000601361 CCDC88AQ3V6T2 1871 aa12.21□□□□□ -0.45
FARP1-234ENST00000601361 PTCD1O75127 700 aaKnown RBP12.21□□□□□ -0.45
FARP1-234ENST00000601361 SMIM5Q71RC9 77 aa12.21□□□□□ -0.45
FARP1-234ENST00000601361 RTCBQ9Y3I0 505 aaKnown RBP12.21□□□□□ -0.45
FARP1-234ENST00000601361 ZNF831Q5JPB2 1677 aa12.21□□□□□ -0.45
FARP1-234ENST00000601361 PXDNLA1KZ92 1463 aa12.21□□□□□ -0.46
FARP1-234ENST00000601361 SCN11AQ9UI33 1791 aa12.2□□□□□ -0.46
FARP1-234ENST00000601361 TOMM70O94826 608 aa12.2□□□□□ -0.46
FARP1-234ENST00000601361 MYH14Q7Z406 1995 aaKnown RBP12.19□□□□□ -0.46
FARP1-234ENST00000601361 TRAPPC3LQ5T215 181 aa12.19□□□□□ -0.46
FARP1-234ENST00000601361 COL13A1Q5TAT6 717 aaPredicted RBP12.19□□□□□ -0.46
FARP1-234ENST00000601361 JMYQ8N9B5 988 aa12.19□□□□□ -0.46
FARP1-234ENST00000601361 MTHFSDQ2M296 383 aaKnown RBP12.18□□□□□ -0.46
FARP1-234ENST00000601361 NUDCQ9Y266 331 aa12.18□□□□□ -0.46
FARP1-234ENST00000601361 RNMTO43148 476 aaKnown RBP12.17□□□□□ -0.46
FARP1-234ENST00000601361 RFC4P35249 363 aa12.17□□□□□ -0.46
FARP1-234ENST00000601361 SLC4A9Q96Q91 983 aa12.17□□□□□ -0.46
FARP1-234ENST00000601361 SLC52A2Q9HAB3 445 aa12.17□□□□□ -0.46
FARP1-234ENST00000601361 LGR6Q9HBX8 967 aa12.17□□□□□ -0.46
FARP1-234ENST00000601361 WWC3Q9ULE0 1092 aa12.17□□□□□ -0.46
FARP1-234ENST00000601361 VIRMAQ69YN4 1812 aaKnown RBP12.16□□□□□ -0.46
FARP1-234ENST00000601361 CNTNAP4Q9C0A0 1308 aa12.16□□□□□ -0.46
FARP1-234ENST00000601361 COL3A1P02461 1466 aaPredicted RBP12.16□□□□□ -0.46
FARP1-234ENST00000601361 RC3H1Q5TC82 1133 aaKnown RBP12.16□□□□□ -0.46
FARP1-234ENST00000601361 GAS2L2Q8NHY3 880 aa12.16□□□□□ -0.46
FARP1-234ENST00000601361 KLRG1Q96E93 195 aa12.16□□□□□ -0.46
FARP1-234ENST00000601361 C10orf71Q711Q0 1435 aa12.16□□□□□ -0.46
FARP1-234ENST00000601361 TEFQ10587 303 aa12.15□□□□□ -0.46
FARP1-234ENST00000601361 TTC5Q8N0Z6 440 aa12.15□□□□□ -0.46
FARP1-234ENST00000601361 NMRK2Q9NPI5 230 aa12.15□□□□□ -0.46
FARP1-234ENST00000601361 GNAT3A8MTJ3 354 aa12.14□□□□□ -0.47
FARP1-234ENST00000601361 RPS6KA4O75676 772 aa12.14□□□□□ -0.47
FARP1-234ENST00000601361 MMP10P09238 476 aa12.14□□□□□ -0.47
FARP1-234ENST00000601361 U2AF1L5P0DN76 240 aaPredicted RBP12.14□□□□□ -0.47
FARP1-234ENST00000601361 PPP2R1AP30153 589 aa12.14□□□□□ -0.47
FARP1-234ENST00000601361 CRKLP46109 303 aaKnown RBP12.14□□□□□ -0.47
FARP1-234ENST00000601361 U2AF1Q01081 240 aaKnown RBP eCLIP12.14□□□□□ -0.47
FARP1-234ENST00000601361 SLC39A6Q13433 755 aa12.14□□□□□ -0.47
FARP1-234ENST00000601361 NLGN1Q8N2Q7 840 aa12.14□□□□□ -0.47
FARP1-234ENST00000601361 ARHGEF1Q92888 912 aaKnown RBP12.14□□□□□ -0.47
FARP1-234ENST00000601361 DLEC1Q9Y238 1755 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms