RNA–Protein interactions for RNA: ENST00000601009.1

FARP1-232, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-232ENST00000601009 MTHFSP49914 203 aa12.45□□□□□ -0.42
FARP1-232ENST00000601009 CABP4P57796 275 aa12.45□□□□□ -0.42
FARP1-232ENST00000601009 MSL1Q68DK7 614 aa12.45□□□□□ -0.42
FARP1-232ENST00000601009 SULT6B1Q6IMI4 303 aa12.45□□□□□ -0.42
FARP1-232ENST00000601009 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
FARP1-232ENST00000601009 ZNF831Q5JPB2 1677 aa12.45□□□□□ -0.42
FARP1-232ENST00000601009 GNPATO15228 680 aa12.44□□□□□ -0.42
FARP1-232ENST00000601009 GRIN3BO60391 1043 aa12.44□□□□□ -0.42
FARP1-232ENST00000601009 IL13P35225 146 aa12.44□□□□□ -0.42
FARP1-232ENST00000601009 LINC00116Q8NCU8 138 aa12.44□□□□□ -0.42
FARP1-232ENST00000601009 ATG3Q9NT62 314 aa12.44□□□□□ -0.42
FARP1-232ENST00000601009 CD2APQ9Y5K6 639 aa12.44□□□□□ -0.42
FARP1-232ENST00000601009 AEBP1Q8IUX7 1158 aa12.43□□□□□ -0.42
FARP1-232ENST00000601009 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
FARP1-232ENST00000601009 NPC1L1Q9UHC9 1359 aa12.43□□□□□ -0.42
FARP1-232ENST00000601009 ADRA2BP18089 450 aa12.42□□□□□ -0.42
FARP1-232ENST00000601009 NLGN2Q8NFZ4 835 aa12.42□□□□□ -0.42
FARP1-232ENST00000601009 RTCBQ9Y3I0 505 aaKnown RBP12.42□□□□□ -0.42
FARP1-232ENST00000601009 KDM6AO15550 1401 aaPredicted RBP12.42□□□□□ -0.42
FARP1-232ENST00000601009 DIAPH1O60610 1272 aaKnown RBP12.41□□□□□ -0.42
FARP1-232ENST00000601009 ITPK1Q13572 414 aa12.41□□□□□ -0.42
FARP1-232ENST00000601009 AKAP4Q5JQC9 854 aa12.41□□□□□ -0.42
FARP1-232ENST00000601009 CC2D1BQ5T0F9 858 aaKnown RBP12.41□□□□□ -0.42
FARP1-232ENST00000601009 RC3H1Q5TC82 1133 aaKnown RBP12.41□□□□□ -0.42
FARP1-232ENST00000601009 CNTNAP4Q9C0A0 1308 aa12.4□□□□□ -0.42
FARP1-232ENST00000601009 PER1O15534 1290 aaPredicted RBP12.4□□□□□ -0.42
FARP1-232ENST00000601009 TRAPPC3LQ5T215 181 aa12.4□□□□□ -0.42
FARP1-232ENST00000601009 ZNF784Q8NCA9 323 aaPredicted RBP12.4□□□□□ -0.42
FARP1-232ENST00000601009 SCN11AQ9UI33 1791 aa12.39□□□□□ -0.43
FARP1-232ENST00000601009 NFATC2IPQ8NCF5 419 aa12.39□□□□□ -0.43
FARP1-232ENST00000601009 COL5A3P25940 1745 aaPredicted RBP12.39□□□□□ -0.43
FARP1-232ENST00000601009 RFC4P35249 363 aa12.38□□□□□ -0.43
FARP1-232ENST00000601009 AMIGO3Q86WK7 504 aa12.38□□□□□ -0.43
FARP1-232ENST00000601009 NLGN1Q8N2Q7 840 aa12.38□□□□□ -0.43
FARP1-232ENST00000601009 PTCD1O75127 700 aaKnown RBP12.37□□□□□ -0.43
FARP1-232ENST00000601009 RPS6KA4O75676 772 aa12.37□□□□□ -0.43
FARP1-232ENST00000601009 HMOX1P09601 288 aa12.37□□□□□ -0.43
FARP1-232ENST00000601009 CFAP53Q96M91 514 aa12.37□□□□□ -0.43
FARP1-232ENST00000601009 SLC4A9Q96Q91 983 aa12.36□□□□□ -0.43
FARP1-232ENST00000601009 SLC52A2Q9HAB3 445 aa12.36□□□□□ -0.43
FARP1-232ENST00000601009 CICQ96RK0 1608 aaPredicted RBP12.36□□□□□ -0.43
FARP1-232ENST00000601009 MRC1P22897 1456 aa12.35□□□□□ -0.43
FARP1-232ENST00000601009 MMP10P09238 476 aa12.35□□□□□ -0.43
FARP1-232ENST00000601009 YBX3P16989 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
FARP1-232ENST00000601009 SMIM5Q71RC9 77 aa12.35□□□□□ -0.43
FARP1-232ENST00000601009 VIRMAQ69YN4 1812 aaKnown RBP12.34□□□□□ -0.43
FARP1-232ENST00000601009 U2SURPO15042 1029 aaKnown RBP12.34□□□□□ -0.43
FARP1-232ENST00000601009 RNMTO43148 476 aaKnown RBP12.34□□□□□ -0.43
FARP1-232ENST00000601009 CRKLP46109 303 aaKnown RBP12.34□□□□□ -0.43
FARP1-232ENST00000601009 CNGB1Q14028 1251 aaPredicted RBP12.34□□□□□ -0.43
FARP1-232ENST00000601009 GAS2L2Q8NHY3 880 aa12.34□□□□□ -0.43
FARP1-232ENST00000601009 ARHGEF1Q92888 912 aaKnown RBP12.34□□□□□ -0.43
FARP1-232ENST00000601009 CCDC87Q9NVE4 849 aa12.34□□□□□ -0.43
FARP1-232ENST00000601009 PARP3Q9Y6F1 533 aa12.34□□□□□ -0.43
FARP1-232ENST00000601009 MYH14Q7Z406 1995 aaKnown RBP12.33□□□□□ -0.44
FARP1-232ENST00000601009 MTHFSDQ2M296 383 aaKnown RBP12.33□□□□□ -0.44
FARP1-232ENST00000601009 NUDCQ9Y266 331 aa12.33□□□□□ -0.44
FARP1-232ENST00000601009 TJP1Q07157 1748 aa12.33□□□□□ -0.44
FARP1-232ENST00000601009 C4AP0C0L4 1744 aa12.32□□□□□ -0.44
FARP1-232ENST00000601009 GYS1P13807 737 aa12.32□□□□□ -0.44
FARP1-232ENST00000601009 TGFB2P61812 414 aa12.32□□□□□ -0.44
FARP1-232ENST00000601009 TTC5Q8N0Z6 440 aa12.32□□□□□ -0.44
FARP1-232ENST00000601009 LGR6Q9HBX8 967 aa12.32□□□□□ -0.44
FARP1-232ENST00000601009 COL3A1P02461 1466 aaPredicted RBP12.32□□□□□ -0.44
FARP1-232ENST00000601009 KIF13BQ9NQT8 1826 aa12.32□□□□□ -0.44
FARP1-232ENST00000601009 ADAMTS7Q9UKP4 1686 aa12.32□□□□□ -0.44
FARP1-232ENST00000601009 GNAT3A8MTJ3 354 aa12.31□□□□□ -0.44
FARP1-232ENST00000601009 ZPR1O75312 459 aa12.31□□□□□ -0.44
FARP1-232ENST00000601009 GIGYF1O75420 1035 aaPredicted RBP12.31□□□□□ -0.44
FARP1-232ENST00000601009 TEFQ10587 303 aa12.31□□□□□ -0.44
FARP1-232ENST00000601009 VSIG10Q8N0Z9 540 aa12.31□□□□□ -0.44
FARP1-232ENST00000601009 C10orf71Q711Q0 1435 aa12.3□□□□□ -0.44
FARP1-232ENST00000601009 USP42Q9H9J4 1324 aaKnown RBP12.3□□□□□ -0.44
FARP1-232ENST00000601009 STARD3NLO95772 234 aa12.29□□□□□ -0.44
FARP1-232ENST00000601009 SLC39A6Q13433 755 aa12.29□□□□□ -0.44
FARP1-232ENST00000601009 DNAJC10Q8IXB1 793 aa12.29□□□□□ -0.44
FARP1-232ENST00000601009 PXDNLA1KZ92 1463 aa12.28□□□□□ -0.44
FARP1-232ENST00000601009 KCPQ6ZWJ8 1503 aa12.28□□□□□ -0.44
FARP1-232ENST00000601009 CYP19A1P11511 503 aaPredicted RBP12.28□□□□□ -0.44
FARP1-232ENST00000601009 C1QTNF8P60827 252 aa12.28□□□□□ -0.44
FARP1-232ENST00000601009 INTS5Q6P9B9 1019 aaKnown RBP12.28□□□□□ -0.44
FARP1-232ENST00000601009 TEX13AQ9BXU3 409 aaPredicted RBP12.28□□□□□ -0.44
FARP1-232ENST00000601009 SOS1Q07889 1333 aaPredicted RBP12.28□□□□□ -0.44
FARP1-232ENST00000601009 UBR2Q8IWV8 1755 aa12.28□□□□□ -0.44
FARP1-232ENST00000601009 NPM2Q86SE8 214 aaKnown RBP12.27□□□□□ -0.45
FARP1-232ENST00000601009 GPBP1L1Q9HC44 474 aaPredicted RBP12.27□□□□□ -0.45
FARP1-232ENST00000601009 SRP68Q9UHB9 627 aaKnown RBP12.27□□□□□ -0.45
FARP1-232ENST00000601009 COL15A1P39059 1388 aa12.27□□□□□ -0.45
FARP1-232ENST00000601009 ATP10DQ9P241 1426 aa12.27□□□□□ -0.45
FARP1-232ENST00000601009 N4BP2Q86UW6 1770 aaPredicted RBP12.26□□□□□ -0.45
FARP1-232ENST00000601009 A0A087WZG4 1122 aa12.26□□□□□ -0.45
FARP1-232ENST00000601009 NEFMP07197 916 aa12.26□□□□□ -0.45
FARP1-232ENST00000601009 U2AF1L5P0DN76 240 aaPredicted RBP12.26□□□□□ -0.45
FARP1-232ENST00000601009 PPP2R1AP30153 589 aa12.26□□□□□ -0.45
FARP1-232ENST00000601009 PRKAR2BP31323 418 aa12.26□□□□□ -0.45
FARP1-232ENST00000601009 U2AF1Q01081 240 aaKnown RBP eCLIP12.26□□□□□ -0.45
FARP1-232ENST00000601009 FKBP8Q14318 412 aa12.26□□□□□ -0.45
FARP1-232ENST00000601009 RTF1Q92541 710 aaKnown RBP12.26□□□□□ -0.45
FARP1-232ENST00000601009 NARFQ9UHQ1 456 aa12.26□□□□□ -0.45
FARP1-232ENST00000601009 WWC3Q9ULE0 1092 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms