RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-223ENST00000600872 ARXQ96QS3 562 aa17.35■□□□□ 0.37
FKRP-223ENST00000600872 ADAMTS7Q9UKP4 1686 aa17.35■□□□□ 0.37
FKRP-223ENST00000600872 COL5A3P25940 1745 aaPredicted RBP17.35■□□□□ 0.37
FKRP-223ENST00000600872 SMIM5Q71RC9 77 aa17.34■□□□□ 0.37
FKRP-223ENST00000600872 MYH14Q7Z406 1995 aaKnown RBP17.33■□□□□ 0.37
FKRP-223ENST00000600872 HSP90AB1P08238 724 aaKnown RBP17.33■□□□□ 0.36
FKRP-223ENST00000600872 DIAPH1O60610 1272 aaKnown RBP17.32■□□□□ 0.36
FKRP-223ENST00000600872 HMOX1P09601 288 aa17.32■□□□□ 0.36
FKRP-223ENST00000600872 CICQ96RK0 1608 aaPredicted RBP17.31■□□□□ 0.36
FKRP-223ENST00000600872 MRC1P22897 1456 aa17.31■□□□□ 0.36
FKRP-223ENST00000600872 HMGB2P26583 209 aaKnown RBP17.29■□□□□ 0.36
FKRP-223ENST00000600872 ATP6V1AP38606 617 aa17.29■□□□□ 0.36
FKRP-223ENST00000600872 AKAP4Q5JQC9 854 aa17.29■□□□□ 0.36
FKRP-223ENST00000600872 LGR6Q9HBX8 967 aa17.29■□□□□ 0.36
FKRP-223ENST00000600872 TJP1Q07157 1748 aa17.28■□□□□ 0.36
FKRP-223ENST00000600872 CABP4P57796 275 aa17.28■□□□□ 0.36
FKRP-223ENST00000600872 CNGB1Q14028 1251 aaPredicted RBP17.28■□□□□ 0.36
FKRP-223ENST00000600872 MTHFSDQ2M296 383 aaKnown RBP17.28■□□□□ 0.36
FKRP-223ENST00000600872 C1orf141Q5JVX7 400 aa17.28■□□□□ 0.36
FKRP-223ENST00000600872 NFATC2IPQ8NCF5 419 aa17.28■□□□□ 0.36
FKRP-223ENST00000600872 FLAD1Q8NFF5 587 aa17.28■□□□□ 0.36
FKRP-223ENST00000600872 AK7Q96M32 723 aa17.28■□□□□ 0.36
FKRP-223ENST00000600872 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.27■□□□□ 0.36
FKRP-223ENST00000600872 SSFA2P28290 1259 aa17.27■□□□□ 0.36
FKRP-223ENST00000600872 POLD1P28340 1107 aa17.27■□□□□ 0.36
FKRP-223ENST00000600872 MSL1Q68DK7 614 aa17.27■□□□□ 0.36
FKRP-223ENST00000600872 RNMTO43148 476 aaKnown RBP17.25■□□□□ 0.35
FKRP-223ENST00000600872 MSH5O43196 834 aa17.25■□□□□ 0.35
FKRP-223ENST00000600872 PPP2R1AP30153 589 aa17.25■□□□□ 0.35
FKRP-223ENST00000600872 CHD4Q14839 1912 aa17.24■□□□□ 0.35
FKRP-223ENST00000600872 PHF14O94880 888 aa17.24■□□□□ 0.35
FKRP-223ENST00000600872 RC3H1Q5TC82 1133 aaKnown RBP17.24■□□□□ 0.35
FKRP-223ENST00000600872 NLGN2Q8NFZ4 835 aa17.24■□□□□ 0.35
FKRP-223ENST00000600872 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
FKRP-223ENST00000600872 SLC52A2Q9HAB3 445 aa17.24■□□□□ 0.35
FKRP-223ENST00000600872 SIPA1L3O60292 1781 aaPredicted RBP17.24■□□□□ 0.35
FKRP-223ENST00000600872 C4AP0C0L4 1744 aa17.24■□□□□ 0.35
FKRP-223ENST00000600872 CNTNAP4Q9C0A0 1308 aa17.23■□□□□ 0.35
FKRP-223ENST00000600872 UBR2Q8IWV8 1755 aa17.23■□□□□ 0.35
FKRP-223ENST00000600872 KCPQ6ZWJ8 1503 aa17.23■□□□□ 0.35
FKRP-223ENST00000600872 GNPATO15228 680 aa17.23■□□□□ 0.35
FKRP-223ENST00000600872 PTCD1O75127 700 aaKnown RBP17.22■□□□□ 0.35
FKRP-223ENST00000600872 RSPH6AQ9H0K4 717 aa17.22■□□□□ 0.35
FKRP-223ENST00000600872 U2SURPO15042 1029 aaKnown RBP17.21■□□□□ 0.35
FKRP-223ENST00000600872 RPS6KA4O75676 772 aa17.2■□□□□ 0.34
FKRP-223ENST00000600872 IL17REQ8NFR9 667 aa17.2■□□□□ 0.34
FKRP-223ENST00000600872 PHACTR3Q96KR7 559 aa17.2■□□□□ 0.34
FKRP-223ENST00000600872 YY1P25490 414 aa17.19■□□□□ 0.34
FKRP-223ENST00000600872 SLC39A6Q13433 755 aa17.19■□□□□ 0.34
FKRP-223ENST00000600872 ARHGEF1Q92888 912 aaKnown RBP17.19■□□□□ 0.34
FKRP-223ENST00000600872 RTCBQ9Y3I0 505 aaKnown RBP17.19■□□□□ 0.34
FKRP-223ENST00000600872 KIF13BQ9NQT8 1826 aa17.19■□□□□ 0.34
FKRP-223ENST00000600872 CRKLP46109 303 aaKnown RBP17.18■□□□□ 0.34
FKRP-223ENST00000600872 INTS5Q6P9B9 1019 aaKnown RBP17.18■□□□□ 0.34
FKRP-223ENST00000600872 KIAA1551Q9HCM1 1747 aa17.18■□□□□ 0.34
FKRP-223ENST00000600872 CEMIPQ8WUJ3 1361 aa17.17■□□□□ 0.34
FKRP-223ENST00000600872 DCAF8L1A6NGE4 600 aa17.17■□□□□ 0.34
FKRP-223ENST00000600872 TRAPPC3LQ5T215 181 aa17.17■□□□□ 0.34
FKRP-223ENST00000600872 KLHL34Q8N239 644 aa17.17■□□□□ 0.34
FKRP-223ENST00000600872 CD2APQ9Y5K6 639 aa17.17■□□□□ 0.34
FKRP-223ENST00000600872 YBX3P16989 372 aaKnown RBP eCLIP17.16■□□□□ 0.34
FKRP-223ENST00000600872 ADRA2BP18089 450 aa17.16■□□□□ 0.34
FKRP-223ENST00000600872 PRKAR2BP31323 418 aa17.16■□□□□ 0.34
FKRP-223ENST00000600872 DNAJC10Q8IXB1 793 aa17.16■□□□□ 0.34
FKRP-223ENST00000600872 GAS2L2Q8NHY3 880 aa17.16■□□□□ 0.34
FKRP-223ENST00000600872 CFAP53Q96M91 514 aa17.16■□□□□ 0.34
FKRP-223ENST00000600872 GNAT3A8MTJ3 354 aa17.15■□□□□ 0.34
FKRP-223ENST00000600872 GYS1P13807 737 aa17.15■□□□□ 0.34
FKRP-223ENST00000600872 CYP19A1P11511 503 aaPredicted RBP17.14■□□□□ 0.33
FKRP-223ENST00000600872 FCHSD2O94868 740 aa17.13■□□□□ 0.33
FKRP-223ENST00000600872 DLG5Q8TDM6 1919 aa17.12■□□□□ 0.33
FKRP-223ENST00000600872 MMP10P09238 476 aa17.12■□□□□ 0.33
FKRP-223ENST00000600872 U2AF1L5P0DN76 240 aaPredicted RBP17.12■□□□□ 0.33
FKRP-223ENST00000600872 U2AF1Q01081 240 aaKnown RBP eCLIP17.12■□□□□ 0.33
FKRP-223ENST00000600872 GPR162Q16538 588 aa17.12■□□□□ 0.33
FKRP-223ENST00000600872 VSIG10Q8N0Z9 540 aa17.12■□□□□ 0.33
FKRP-223ENST00000600872 NUDCQ9Y266 331 aa17.12■□□□□ 0.33
FKRP-223ENST00000600872 SOS1Q07889 1333 aaPredicted RBP17.12■□□□□ 0.33
FKRP-223ENST00000600872 NLGN1Q8N2Q7 840 aa17.11■□□□□ 0.33
FKRP-223ENST00000600872 CCDC87Q9NVE4 849 aa17.11■□□□□ 0.33
FKRP-223ENST00000600872 SRP68Q9UHB9 627 aaKnown RBP17.11■□□□□ 0.33
FKRP-223ENST00000600872 USP42Q9H9J4 1324 aaKnown RBP17.11■□□□□ 0.33
FKRP-223ENST00000600872 RFC4P35249 363 aa17.1■□□□□ 0.33
FKRP-223ENST00000600872 ZNF790Q6PG37 636 aa17.1■□□□□ 0.33
FKRP-223ENST00000600872 ZNF496Q96IT1 587 aaPredicted RBP17.1■□□□□ 0.33
FKRP-223ENST00000600872 ZBTB1Q9Y2K1 713 aa17.1■□□□□ 0.33
FKRP-223ENST00000600872 C10orf71Q711Q0 1435 aa17.1■□□□□ 0.33
FKRP-223ENST00000600872 N4BP2Q86UW6 1770 aaPredicted RBP17.1■□□□□ 0.33
FKRP-223ENST00000600872 BRCA1P38398 1863 aaKnown RBP17.1■□□□□ 0.33
FKRP-223ENST00000600872 KCNQ3O43525 872 aa17.09■□□□□ 0.33
FKRP-223ENST00000600872 PLEKHF1Q96S99 279 aa17.09■□□□□ 0.33
FKRP-223ENST00000600872 PXDNLA1KZ92 1463 aa17.08■□□□□ 0.32
FKRP-223ENST00000600872 HEG1Q9ULI3 1381 aa17.08■□□□□ 0.32
FKRP-223ENST00000600872 FKBP8Q14318 412 aa17.08■□□□□ 0.32
FKRP-223ENST00000600872 ZNF784Q8NCA9 323 aaPredicted RBP17.08■□□□□ 0.32
FKRP-223ENST00000600872 TEFQ10587 303 aa17.07■□□□□ 0.32
FKRP-223ENST00000600872 BCL2L12Q9HB09 334 aa17.07■□□□□ 0.32
FKRP-223ENST00000600872 AFDNP55196 1824 aaKnown RBP17.07■□□□□ 0.32
FKRP-223ENST00000600872 TM4SF1P30408 202 aa17.06■□□□□ 0.32
FKRP-223ENST00000600872 DDR1Q08345 913 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms