RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 RBM19Q9Y4C8 960 aaKnown RBP25.48■■□□□ 1.67
PNKP-214ENST00000600573 ZCRB1Q8TBF4 217 aaKnown RBP25.48■■□□□ 1.67
PNKP-214ENST00000600573 STK31Q9BXU1 1019 aa25.48■■□□□ 1.67
PNKP-214ENST00000600573 STRN4Q9NRL3 753 aa25.48■■□□□ 1.67
PNKP-214ENST00000600573 BTG4Q9NY30 223 aa25.48■■□□□ 1.67
PNKP-214ENST00000600573 TCERG1O14776 1098 aaKnown RBP25.47■■□□□ 1.67
PNKP-214ENST00000600573 LARP1Q6PKG0 1096 aaKnown RBP25.47■■□□□ 1.67
PNKP-214ENST00000600573 EIF4A1P60842 406 aaKnown RBP25.46■■□□□ 1.67
PNKP-214ENST00000600573 KRT24Q2M2I5 525 aa25.46■■□□□ 1.67
PNKP-214ENST00000600573 PCDH11XQ9BZA7 1347 aa25.46■■□□□ 1.67
PNKP-214ENST00000600573 PCDH11YQ9BZA8 1340 aa25.46■■□□□ 1.67
PNKP-214ENST00000600573 PKD1L3Q7Z443 1732 aa25.45■■□□□ 1.67
PNKP-214ENST00000600573 PARP4Q9UKK3 1724 aaKnown RBP25.44■■□□□ 1.66
PNKP-214ENST00000600573 SLC52A2Q9HAB3 445 aa25.44■■□□□ 1.66
PNKP-214ENST00000600573 SLC4A2P04920 1241 aa25.43■■□□□ 1.66
PNKP-214ENST00000600573 ITPRIPQ8IWB1 547 aa25.43■■□□□ 1.66
PNKP-214ENST00000600573 TMEM57Q8N5G2 664 aa25.43■■□□□ 1.66
PNKP-214ENST00000600573 ABCC4O15439 1325 aa25.43■■□□□ 1.66
PNKP-214ENST00000600573 CYP27B1O15528 508 aa25.42■■□□□ 1.66
PNKP-214ENST00000600573 NKX1-1Q15270 411 aaPredicted RBP25.42■■□□□ 1.66
PNKP-214ENST00000600573 FBXO41Q8TF61 875 aa25.42■■□□□ 1.66
PNKP-214ENST00000600573 VIRMAQ69YN4 1812 aaKnown RBP25.4■■□□□ 1.66
PNKP-214ENST00000600573 KDM3BQ7LBC6 1761 aa25.4■■□□□ 1.66
PNKP-214ENST00000600573 KDM6AO15550 1401 aaPredicted RBP25.39■■□□□ 1.66
PNKP-214ENST00000600573 ERVV-2B6SEH9 535 aa25.38■■□□□ 1.65
PNKP-214ENST00000600573 CDCA7Q9BWT1 371 aaPredicted RBP25.38■■□□□ 1.65
PNKP-214ENST00000600573 HEG1Q9ULI3 1381 aa25.38■■□□□ 1.65
PNKP-214ENST00000600573 HDGFL1Q5TGJ6 251 aa25.37■■□□□ 1.65
PNKP-214ENST00000600573 RWDD1Q9H446 243 aaPredicted RBP25.37■■□□□ 1.65
PNKP-214ENST00000600573 MRC1P22897 1456 aa25.37■■□□□ 1.65
PNKP-214ENST00000600573 INTS3Q68E01 1043 aaKnown RBP25.37■■□□□ 1.65
PNKP-214ENST00000600573 ZBTB40Q9NUA8 1239 aa25.37■■□□□ 1.65
PNKP-214ENST00000600573 THRAP3Q9Y2W1 955 aaKnown RBP25.37■■□□□ 1.65
PNKP-214ENST00000600573 JCADQ9P266 1359 aa25.36■■□□□ 1.65
PNKP-214ENST00000600573 SCN11AQ9UI33 1791 aa25.36■■□□□ 1.65
PNKP-214ENST00000600573 CABP4P57796 275 aa25.35■■□□□ 1.65
PNKP-214ENST00000600573 ZNF790Q6PG37 636 aa25.35■■□□□ 1.65
PNKP-214ENST00000600573 NFATC2IPQ8NCF5 419 aa25.34■■□□□ 1.65
PNKP-214ENST00000600573 SIPA1L3O60292 1781 aaPredicted RBP25.34■■□□□ 1.65
PNKP-214ENST00000600573 ZBTB7BO15156 539 aaPredicted RBP25.34■■□□□ 1.65
PNKP-214ENST00000600573 GIGYF1O75420 1035 aaPredicted RBP25.34■■□□□ 1.65
PNKP-214ENST00000600573 KCNQ3O43525 872 aa25.32■■□□□ 1.64
PNKP-214ENST00000600573 ADAMTS2O95450 1211 aa25.32■■□□□ 1.64
PNKP-214ENST00000600573 IGHDP01880 384 aa25.32■■□□□ 1.64
PNKP-214ENST00000600573 PCDHB15Q9Y5E8 787 aa25.32■■□□□ 1.64
PNKP-214ENST00000600573 CACNA1FO60840 1977 aa25.32■■□□□ 1.64
PNKP-214ENST00000600573 CCT4P50991 539 aaKnown RBP25.31■■□□□ 1.64
PNKP-214ENST00000600573 FLIIQ13045 1269 aa25.31■■□□□ 1.64
PNKP-214ENST00000600573 TTC5Q8N0Z6 440 aa25.31■■□□□ 1.64
PNKP-214ENST00000600573 HDAC1Q13547 482 aaPredicted RBP25.3■■□□□ 1.64
PNKP-214ENST00000600573 DBF4Q9UBU7 674 aaPredicted RBP25.3■■□□□ 1.64
PNKP-214ENST00000600573 DISP2A7MBM2 1401 aa25.3■■□□□ 1.64
PNKP-214ENST00000600573 SPATA31A6Q5VVP1 1343 aa25.29■■□□□ 1.64
PNKP-214ENST00000600573 USP35Q9P2H5 1018 aa25.29■■□□□ 1.64
PNKP-214ENST00000600573 RGS12O14924 1447 aa25.29■■□□□ 1.64
PNKP-214ENST00000600573 NUTM2BA6NNL0 878 aaPredicted RBP25.28■■□□□ 1.64
PNKP-214ENST00000600573 NUTM2EB1AL46 878 aaPredicted RBP25.28■■□□□ 1.64
PNKP-214ENST00000600573 NUTM2AQ8IVF1 878 aaPredicted RBP25.28■■□□□ 1.64
PNKP-214ENST00000600573 DDX54Q8TDD1 881 aaKnown RBP25.28■■□□□ 1.64
PNKP-214ENST00000600573 EXOC5O00471 708 aa25.27■■□□□ 1.64
PNKP-214ENST00000600573 EIF2S2P20042 333 aaKnown RBP25.27■■□□□ 1.64
PNKP-214ENST00000600573 FMNL2Q96PY5 1086 aa25.27■■□□□ 1.64
PNKP-214ENST00000600573 G2E3Q7L622 706 aa25.26■■□□□ 1.63
PNKP-214ENST00000600573 SPATA31A1Q5TZJ5 1347 aa25.26■■□□□ 1.63
PNKP-214ENST00000600573 SLIT2O94813 1529 aa25.26■■□□□ 1.63
PNKP-214ENST00000600573 FKBP5Q13451 457 aaPredicted RBP25.26■■□□□ 1.63
PNKP-214ENST00000600573 PLCH1Q4KWH8 1693 aa25.25■■□□□ 1.63
PNKP-214ENST00000600573 NWD2Q9ULI1 1742 aa25.25■■□□□ 1.63
PNKP-214ENST00000600573 SNRPA1P09661 255 aaKnown RBP25.25■■□□□ 1.63
PNKP-214ENST00000600573 HSPA1LP34931 641 aa25.24■■□□□ 1.63
PNKP-214ENST00000600573 HYPKQ9NX55 129 aa25.24■■□□□ 1.63
PNKP-214ENST00000600573 SKAP1Q86WV1 359 aa25.23■■□□□ 1.63
PNKP-214ENST00000600573 NECTIN2Q92692 538 aa25.23■■□□□ 1.63
PNKP-214ENST00000600573 N4BP2Q86UW6 1770 aaPredicted RBP25.23■■□□□ 1.63
PNKP-214ENST00000600573 SLC39A6Q13433 755 aa25.23■■□□□ 1.63
PNKP-214ENST00000600573 BARGINQ6ZT62 677 aa25.23■■□□□ 1.63
PNKP-214ENST00000600573 PXDNLA1KZ92 1463 aa25.22■■□□□ 1.63
PNKP-214ENST00000600573 UNC5CLQ8IV45 518 aa25.22■■□□□ 1.63
PNKP-214ENST00000600573 DDX21Q9NR30 783 aaKnown RBP eCLIP25.22■■□□□ 1.63
PNKP-214ENST00000600573 CHPF2Q9P2E5 772 aa25.22■■□□□ 1.63
PNKP-214ENST00000600573 SPATA31A5Q5VU36 1347 aa25.22■■□□□ 1.63
PNKP-214ENST00000600573 SPATA31A7Q8IWB4 1347 aa25.22■■□□□ 1.63
PNKP-214ENST00000600573 NRAPQ86VF7 1730 aa25.21■■□□□ 1.63
PNKP-214ENST00000600573 PDE4AP27815 886 aa25.2■■□□□ 1.62
PNKP-214ENST00000600573 ZNF496Q96IT1 587 aaPredicted RBP25.2■■□□□ 1.62
PNKP-214ENST00000600573 SHANK3Q9BYB0 1731 aa25.19■■□□□ 1.62
PNKP-214ENST00000600573 RPAP2Q8IXW5 612 aaPredicted RBP25.19■■□□□ 1.62
PNKP-214ENST00000600573 BACH2Q9BYV9 841 aa25.19■■□□□ 1.62
PNKP-214ENST00000600573 TMOD3Q9NYL9 352 aa25.19■■□□□ 1.62
PNKP-214ENST00000600573 ERBB4Q15303 1308 aa25.18■■□□□ 1.62
PNKP-214ENST00000600573 SLC4A10Q6U841 1118 aa25.18■■□□□ 1.62
PNKP-214ENST00000600573 FNBP4Q8N3X1 1017 aaPredicted RBP25.18■■□□□ 1.62
PNKP-214ENST00000600573 NGLY1Q96IV0 654 aa25.18■■□□□ 1.62
PNKP-214ENST00000600573 DDX58O95786 925 aaKnown RBP25.17■■□□□ 1.62
PNKP-214ENST00000600573 GNAI3P08754 354 aa25.17■■□□□ 1.62
PNKP-214ENST00000600573 RGS3P49796 1198 aa25.17■■□□□ 1.62
PNKP-214ENST00000600573 PHAXQ9H814 394 aaKnown RBP25.17■■□□□ 1.62
PNKP-214ENST00000600573 TNS2Q63HR2 1409 aa25.17■■□□□ 1.62
PNKP-214ENST00000600573 VPS72Q15906 364 aa25.16■■□□□ 1.62
PNKP-214ENST00000600573 F6X3S4 739 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms