RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 FILIP1Q7Z7B0 1213 aa11.65□□□□□ -0.54
NFKB1-212ENST00000600343 ZNF526Q8TF50 670 aaPredicted RBP11.65□□□□□ -0.54
NFKB1-212ENST00000600343 TERF2IPQ9NYB0 399 aa11.65□□□□□ -0.54
NFKB1-212ENST00000600343 PSD3Q9NYI0 1048 aa11.65□□□□□ -0.54
NFKB1-212ENST00000600343 NBPF6Q5VWK0 638 aa11.65□□□□□ -0.54
NFKB1-212ENST00000600343 NBPF5PQ86XG9 351 aaPredicted RBP11.65□□□□□ -0.54
NFKB1-212ENST00000600343 NBPF4Q96M43 638 aa11.65□□□□□ -0.54
NFKB1-212ENST00000600343 ROCK1Q13464 1354 aa11.65□□□□□ -0.55
NFKB1-212ENST00000600343 TPM1P09493 284 aa11.64□□□□□ -0.55
NFKB1-212ENST00000600343 PDRG1Q9NUG6 133 aa11.64□□□□□ -0.55
NFKB1-212ENST00000600343 ARHGEF12Q9NZN5 1544 aa11.64□□□□□ -0.55
NFKB1-212ENST00000600343 SCP2P22307 547 aa11.64□□□□□ -0.55
NFKB1-212ENST00000600343 CORO7P57737 925 aa11.64□□□□□ -0.55
NFKB1-212ENST00000600343 SMC1AQ14683 1233 aaKnown RBP11.64□□□□□ -0.55
NFKB1-212ENST00000600343 ZKSCAN8Q15776 578 aaPredicted RBP11.64□□□□□ -0.55
NFKB1-212ENST00000600343 LIG1P18858 919 aa11.64□□□□□ -0.55
NFKB1-212ENST00000600343 ZSCAN16Q9H4T2 348 aaPredicted RBP11.64□□□□□ -0.55
NFKB1-212ENST00000600343 ADAM21Q9UKJ8 722 aa11.64□□□□□ -0.55
NFKB1-212ENST00000600343 KANK1Q14678 1352 aa11.64□□□□□ -0.55
NFKB1-212ENST00000600343 GPRASP1Q5JY77 1395 aa11.64□□□□□ -0.55
NFKB1-212ENST00000600343 SCAF11Q99590 1463 aaKnown RBP11.64□□□□□ -0.55
NFKB1-212ENST00000600343 SMC2O95347 1197 aa11.64□□□□□ -0.55
NFKB1-212ENST00000600343 CASTP20810 708 aaKnown RBP11.64□□□□□ -0.55
NFKB1-212ENST00000600343 TMF1P82094 1093 aa11.64□□□□□ -0.55
NFKB1-212ENST00000600343 FUCA2Q9BTY2 467 aa11.64□□□□□ -0.55
NFKB1-212ENST00000600343 PIK3C2GO75747 1445 aa11.63□□□□□ -0.55
NFKB1-212ENST00000600343 USP27XA6NNY8 438 aa11.63□□□□□ -0.55
NFKB1-212ENST00000600343 LAMC3Q9Y6N6 1575 aa11.63□□□□□ -0.55
NFKB1-212ENST00000600343 KLHL33A6NCF5 533 aa11.63□□□□□ -0.55
NFKB1-212ENST00000600343 C11orf91Q3C1V1 193 aa11.63□□□□□ -0.55
NFKB1-212ENST00000600343 NYAP1Q6ZVC0 841 aa11.63□□□□□ -0.55
NFKB1-212ENST00000600343 CACTINQ8WUQ7 758 aaKnown RBP11.63□□□□□ -0.55
NFKB1-212ENST00000600343 UBXN6Q9BZV1 441 aa11.63□□□□□ -0.55
NFKB1-212ENST00000600343 BSDC1Q9NW68 430 aaPredicted RBP11.63□□□□□ -0.55
NFKB1-212ENST00000600343 SEC31AO94979 1220 aaKnown RBP11.63□□□□□ -0.55
NFKB1-212ENST00000600343 CPP00450 1065 aa11.63□□□□□ -0.55
NFKB1-212ENST00000600343 TBC1D22AQ8WUA7 517 aa11.63□□□□□ -0.55
NFKB1-212ENST00000600343 CCDC34Q96HJ3 373 aa11.63□□□□□ -0.55
NFKB1-212ENST00000600343 TRIM5Q9C035 493 aa11.63□□□□□ -0.55
NFKB1-212ENST00000600343 ANKRD65E5RJM6 399 aa11.62□□□□□ -0.55
NFKB1-212ENST00000600343 ATP8B1O43520 1251 aa11.62□□□□□ -0.55
NFKB1-212ENST00000600343 KDM5DQ9BY66 1539 aa11.62□□□□□ -0.55
NFKB1-212ENST00000600343 CCDC192P0DO97 292 aa11.62□□□□□ -0.55
NFKB1-212ENST00000600343 EFCAB13Q8IY85 973 aa11.62□□□□□ -0.55
NFKB1-212ENST00000600343 GIMAP7Q8NHV1 300 aa11.62□□□□□ -0.55
NFKB1-212ENST00000600343 ARHGEF11O15085 1522 aa11.62□□□□□ -0.55
NFKB1-212ENST00000600343 MICALL1Q8N3F8 863 aa11.61□□□□□ -0.55
NFKB1-212ENST00000600343 TRMT1Q9NXH9 659 aaKnown RBP11.61□□□□□ -0.55
NFKB1-212ENST00000600343 MRVI1Q9Y6F6 885 aa11.61□□□□□ -0.55
NFKB1-212ENST00000600343 YEATS2Q9ULM3 1422 aa11.61□□□□□ -0.55
NFKB1-212ENST00000600343 ELP1O95163 1332 aa11.61□□□□□ -0.55
NFKB1-212ENST00000600343 ARID4AP29374 1257 aaPredicted RBP11.61□□□□□ -0.55
NFKB1-212ENST00000600343 FOXR1Q6PIV2 292 aa11.61□□□□□ -0.55
NFKB1-212ENST00000600343 FAM200AQ8TCP9 573 aa11.61□□□□□ -0.55
NFKB1-212ENST00000600343 RRP7AQ9Y3A4 280 aaKnown RBP11.61□□□□□ -0.55
NFKB1-212ENST00000600343 KIAA0586Q9BVV6 1533 aa11.61□□□□□ -0.55
NFKB1-212ENST00000600343 PLB1Q6P1J6 1458 aa11.61□□□□□ -0.55
NFKB1-212ENST00000600343 TTC19Q6DKK2 380 aaPredicted RBP11.61□□□□□ -0.55
NFKB1-212ENST00000600343 UBXN4Q92575 508 aa11.61□□□□□ -0.55
NFKB1-212ENST00000600343 TMX3Q96JJ7 454 aa11.61□□□□□ -0.55
NFKB1-212ENST00000600343 ERBINQ96RT1 1412 aa11.6□□□□□ -0.55
NFKB1-212ENST00000600343 TRIM27P14373 513 aa11.6□□□□□ -0.55
NFKB1-212ENST00000600343 USP8P40818 1118 aa11.6□□□□□ -0.55
NFKB1-212ENST00000600343 UBE2HP62256 183 aa11.6□□□□□ -0.55
NFKB1-212ENST00000600343 TADA2BQ86TJ2 420 aa11.6□□□□□ -0.55
NFKB1-212ENST00000600343 NEBLO76041 1014 aa11.6□□□□□ -0.55
NFKB1-212ENST00000600343 LRRN4CLQ8ND94 238 aa11.6□□□□□ -0.55
NFKB1-212ENST00000600343 ITFG2Q969R8 447 aa11.6□□□□□ -0.55
NFKB1-212ENST00000600343 TESK2Q96S53 571 aa11.6□□□□□ -0.55
NFKB1-212ENST00000600343 CLIP2Q9UDT6 1046 aa11.6□□□□□ -0.55
NFKB1-212ENST00000600343 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.6□□□□□ -0.55
NFKB1-212ENST00000600343 ZNF75DP51815 510 aa11.59□□□□□ -0.55
NFKB1-212ENST00000600343 NAIF1Q69YI7 327 aaPredicted RBP11.59□□□□□ -0.55
NFKB1-212ENST00000600343 CWC27Q6UX04 472 aaKnown RBP11.59□□□□□ -0.55
NFKB1-212ENST00000600343 LUZP1Q86V48 1076 aa11.59□□□□□ -0.55
NFKB1-212ENST00000600343 BORCS6Q96GS4 357 aa11.59□□□□□ -0.55
NFKB1-212ENST00000600343 DAPK1P53355 1430 aa11.59□□□□□ -0.55
NFKB1-212ENST00000600343 TMEM87AQ8NBN3 555 aa11.59□□□□□ -0.55
NFKB1-212ENST00000600343 SLC24A3Q9HC58 644 aa11.59□□□□□ -0.55
NFKB1-212ENST00000600343 ORC3Q9UBD5 711 aaPredicted RBP11.59□□□□□ -0.55
NFKB1-212ENST00000600343 SPAG9O60271 1321 aaKnown RBP11.59□□□□□ -0.55
NFKB1-212ENST00000600343 SASH3O75995 380 aa11.59□□□□□ -0.55
NFKB1-212ENST00000600343 OTUD6BQ8N6M0 293 aa11.59□□□□□ -0.55
NFKB1-212ENST00000600343 ZBTB40Q9NUA8 1239 aa11.59□□□□□ -0.55
NFKB1-212ENST00000600343 CNPY2Q9Y2B0 182 aa11.59□□□□□ -0.55
NFKB1-212ENST00000600343 CCDC141Q6ZP82 1450 aa11.59□□□□□ -0.55
NFKB1-212ENST00000600343 L2HGDHQ9H9P8 463 aa11.58□□□□□ -0.55
NFKB1-212ENST00000600343 MKRN1Q9UHC7 482 aaKnown RBP11.58□□□□□ -0.55
NFKB1-212ENST00000600343 WDR33Q9C0J8 1336 aaKnown RBP11.58□□□□□ -0.56
NFKB1-212ENST00000600343 TBC1D8O95759 1140 aa11.58□□□□□ -0.56
NFKB1-212ENST00000600343 ZNF428Q96B54 188 aa11.58□□□□□ -0.56
NFKB1-212ENST00000600343 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.58□□□□□ -0.56
NFKB1-212ENST00000600343 ANKRD50Q9ULJ7 1429 aa11.58□□□□□ -0.56
NFKB1-212ENST00000600343 ATP10AO60312 1499 aa11.58□□□□□ -0.56
NFKB1-212ENST00000600343 A0A087WUV0 522 aaPredicted RBP11.58□□□□□ -0.56
NFKB1-212ENST00000600343 GBP6Q6ZN66 633 aa11.58□□□□□ -0.56
NFKB1-212ENST00000600343 LRRIQ1Q96JM4 1722 aa11.58□□□□□ -0.56
NFKB1-212ENST00000600343 SKILP12757 684 aa11.57□□□□□ -0.56
NFKB1-212ENST00000600343 GORABQ5T7V8 394 aa11.57□□□□□ -0.56
NFKB1-212ENST00000600343 MIEF2Q96C03 454 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms