RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 ATP10DQ9P241 1426 aa18.85■□□□□ 0.61
IRF3-225ENST00000600022 IGSF1Q8N6C5 1336 aa18.85■□□□□ 0.61
IRF3-225ENST00000600022 GNPATO15228 680 aa18.85■□□□□ 0.61
IRF3-225ENST00000600022 ZNF526Q8TF50 670 aaPredicted RBP18.85■□□□□ 0.61
IRF3-225ENST00000600022 SSFA2P28290 1259 aa18.84■□□□□ 0.61
IRF3-225ENST00000600022 PANK3Q9H999 370 aa18.83■□□□□ 0.6
IRF3-225ENST00000600022 HSPA5P11021 654 aaKnown RBP18.81■□□□□ 0.6
IRF3-225ENST00000600022 AEBP1Q8IUX7 1158 aa18.81■□□□□ 0.6
IRF3-225ENST00000600022 MMP10P09238 476 aa18.8■□□□□ 0.6
IRF3-225ENST00000600022 RBM42Q9BTD8 480 aaKnown RBP18.8■□□□□ 0.6
IRF3-225ENST00000600022 ADCY9O60503 1353 aa18.79■□□□□ 0.6
IRF3-225ENST00000600022 HMGB2P26583 209 aaKnown RBP18.78■□□□□ 0.6
IRF3-225ENST00000600022 ARHGEF1Q92888 912 aaKnown RBP18.78■□□□□ 0.6
IRF3-225ENST00000600022 GPBP1L1Q9HC44 474 aaPredicted RBP18.78■□□□□ 0.6
IRF3-225ENST00000600022 KDRP35968 1356 aa18.78■□□□□ 0.6
IRF3-225ENST00000600022 A0A0G2JLW4 131 aa18.77■□□□□ 0.6
IRF3-225ENST00000600022 ERVV-2B6SEH9 535 aa18.77■□□□□ 0.6
IRF3-225ENST00000600022 TRAPPC3LQ5T215 181 aa18.77■□□□□ 0.6
IRF3-225ENST00000600022 KDM6AO15550 1401 aaPredicted RBP18.76■□□□□ 0.59
IRF3-225ENST00000600022 ZNF530Q6P9A1 599 aaPredicted RBP18.76■□□□□ 0.59
IRF3-225ENST00000600022 ZNF316A6NFI3 1004 aaPredicted RBP18.75■□□□□ 0.59
IRF3-225ENST00000600022 PLEKHO1Q53GL0 409 aaPredicted RBP18.75■□□□□ 0.59
IRF3-225ENST00000600022 DCAF5Q96JK2 942 aa18.75■□□□□ 0.59
IRF3-225ENST00000600022 RTCBQ9Y3I0 505 aaKnown RBP18.75■□□□□ 0.59
IRF3-225ENST00000600022 PTCD1O75127 700 aaKnown RBP18.74■□□□□ 0.59
IRF3-225ENST00000600022 GYS1P13807 737 aa18.74■□□□□ 0.59
IRF3-225ENST00000600022 CABP4P57796 275 aa18.74■□□□□ 0.59
IRF3-225ENST00000600022 EIF4G2P78344 907 aaKnown RBP eCLIP18.74■□□□□ 0.592e-7■■■■■ 34.3
IRF3-225ENST00000600022 NFATC2IPQ8NCF5 419 aa18.74■□□□□ 0.59
IRF3-225ENST00000600022 PXDNLA1KZ92 1463 aa18.73■□□□□ 0.59
IRF3-225ENST00000600022 RPS6KA4O75676 772 aa18.72■□□□□ 0.59
IRF3-225ENST00000600022 DPEP1P16444 411 aa18.72■□□□□ 0.59
IRF3-225ENST00000600022 MTHFSP49914 203 aa18.72■□□□□ 0.59
IRF3-225ENST00000600022 RC3H1Q5TC82 1133 aaKnown RBP18.72■□□□□ 0.59
IRF3-225ENST00000600022 SULT6B1Q6IMI4 303 aa18.72■□□□□ 0.59
IRF3-225ENST00000600022 MORC1Q86VD1 984 aa18.72■□□□□ 0.59
IRF3-225ENST00000600022 NLGN1Q8N2Q7 840 aa18.71■□□□□ 0.59
IRF3-225ENST00000600022 SRP68Q9UHB9 627 aaKnown RBP18.71■□□□□ 0.59
IRF3-225ENST00000600022 BCS1LQ9Y276 419 aa18.71■□□□□ 0.59
IRF3-225ENST00000600022 CICQ96RK0 1608 aaPredicted RBP18.71■□□□□ 0.58
IRF3-225ENST00000600022 MYH14Q7Z406 1995 aaKnown RBP18.7■□□□□ 0.58
IRF3-225ENST00000600022 KIF3CO14782 793 aa18.7■□□□□ 0.58
IRF3-225ENST00000600022 KCNA3P22001 575 aa18.7■□□□□ 0.58
IRF3-225ENST00000600022 KIAA1551Q9HCM1 1747 aa18.7■□□□□ 0.58
IRF3-225ENST00000600022 N4BP2Q86UW6 1770 aaPredicted RBP18.7■□□□□ 0.58
IRF3-225ENST00000600022 HSP90AB1P08238 724 aaKnown RBP18.69■□□□□ 0.58
IRF3-225ENST00000600022 IL13P35225 146 aa18.69■□□□□ 0.58
IRF3-225ENST00000600022 RFC4P35249 363 aa18.69■□□□□ 0.58
IRF3-225ENST00000600022 AMOTQ4VCS5 1084 aa18.69■□□□□ 0.58
IRF3-225ENST00000600022 CNTNAP4Q9C0A0 1308 aa18.69■□□□□ 0.58
IRF3-225ENST00000600022 CRKLP46109 303 aaKnown RBP18.68■□□□□ 0.58
IRF3-225ENST00000600022 TGFB2P61812 414 aa18.68■□□□□ 0.58
IRF3-225ENST00000600022 FKBP8Q14318 412 aa18.68■□□□□ 0.58
IRF3-225ENST00000600022 ARHGAP27Q6ZUM4 889 aa18.68■□□□□ 0.58
IRF3-225ENST00000600022 LGR6Q9HBX8 967 aa18.68■□□□□ 0.58
IRF3-225ENST00000600022 HSPA6P17066 643 aa18.67■□□□□ 0.58
IRF3-225ENST00000600022 INTS5Q6P9B9 1019 aaKnown RBP18.67■□□□□ 0.58
IRF3-225ENST00000600022 C10orf71Q711Q0 1435 aa18.66■□□□□ 0.58
IRF3-225ENST00000600022 COL5A3P25940 1745 aaPredicted RBP18.66■□□□□ 0.58
IRF3-225ENST00000600022 ADRA2BP18089 450 aa18.66■□□□□ 0.58
IRF3-225ENST00000600022 DDR1Q08345 913 aa18.66■□□□□ 0.58
IRF3-225ENST00000600022 C1orf141Q5JVX7 400 aa18.66■□□□□ 0.58
IRF3-225ENST00000600022 KIF13BQ9NQT8 1826 aa18.65■□□□□ 0.58
IRF3-225ENST00000600022 FCHSD2O94868 740 aa18.65■□□□□ 0.58
IRF3-225ENST00000600022 CCDC87Q9NVE4 849 aa18.65■□□□□ 0.58
IRF3-225ENST00000600022 PARP3Q9Y6F1 533 aa18.65■□□□□ 0.58
IRF3-225ENST00000600022 PLEKHG2Q9H7P9 1386 aa18.65■□□□□ 0.58
IRF3-225ENST00000600022 ZNF831Q5JPB2 1677 aa18.64■□□□□ 0.57
IRF3-225ENST00000600022 AMER1Q5JTC6 1135 aaPredicted RBP18.64■□□□□ 0.57
IRF3-225ENST00000600022 HMOX1P09601 288 aa18.63■□□□□ 0.57
IRF3-225ENST00000600022 SLC39A6Q13433 755 aa18.63■□□□□ 0.57
IRF3-225ENST00000600022 DNAJC10Q8IXB1 793 aa18.63■□□□□ 0.57
IRF3-225ENST00000600022 KNSTRNQ9Y448 316 aa18.63■□□□□ 0.57
IRF3-225ENST00000600022 C4AP0C0L4 1744 aa18.63■□□□□ 0.57
IRF3-225ENST00000600022 CHRNA5P30532 468 aa18.62■□□□□ 0.57
IRF3-225ENST00000600022 NMRK2Q9NPI5 230 aa18.62■□□□□ 0.57
IRF3-225ENST00000600022 USP42Q9H9J4 1324 aaKnown RBP18.61■□□□□ 0.57
IRF3-225ENST00000600022 TM4SF1P30408 202 aa18.6■□□□□ 0.57
IRF3-225ENST00000600022 IFFO2Q5TF58 517 aa18.6■□□□□ 0.57
IRF3-225ENST00000600022 TJP1Q07157 1748 aa18.6■□□□□ 0.57
IRF3-225ENST00000600022 AKAP4Q5JQC9 854 aa18.59■□□□□ 0.57
IRF3-225ENST00000600022 C9orf131Q5VYM1 1079 aa18.59■□□□□ 0.57
IRF3-225ENST00000600022 USPL1Q5W0Q7 1092 aa18.59■□□□□ 0.57
IRF3-225ENST00000600022 SLC52A2Q9HAB3 445 aa18.59■□□□□ 0.57
IRF3-225ENST00000600022 KIF7Q2M1P5 1343 aa18.58■□□□□ 0.57
IRF3-225ENST00000600022 POLRMTO00411 1230 aaKnown RBP18.58■□□□□ 0.56
IRF3-225ENST00000600022 RNMTO43148 476 aaKnown RBP18.58■□□□□ 0.56
IRF3-225ENST00000600022 MTHFSDQ2M296 383 aaKnown RBP18.58■□□□□ 0.56
IRF3-225ENST00000600022 PIM2Q9P1W9 311 aa18.58■□□□□ 0.56
IRF3-225ENST00000600022 PER1O15534 1290 aaPredicted RBP18.57■□□□□ 0.56
IRF3-225ENST00000600022 CYP19A1P11511 503 aaPredicted RBP18.57■□□□□ 0.56
IRF3-225ENST00000600022 CNGB1Q14028 1251 aaPredicted RBP18.57■□□□□ 0.56
IRF3-225ENST00000600022 ADAMTS7Q9UKP4 1686 aa18.57■□□□□ 0.56
IRF3-225ENST00000600022 BRCA1P38398 1863 aaKnown RBP18.56■□□□□ 0.56
IRF3-225ENST00000600022 SCN11AQ9UI33 1791 aa18.56■□□□□ 0.56
IRF3-225ENST00000600022 DALRD3Q5D0E6 543 aaKnown RBP18.56■□□□□ 0.56
IRF3-225ENST00000600022 CC2D1BQ5T0F9 858 aaKnown RBP18.56■□□□□ 0.56
IRF3-225ENST00000600022 SOS1Q07889 1333 aaPredicted RBP18.55■□□□□ 0.56
IRF3-225ENST00000600022 TOMM70O94826 608 aa18.55■□□□□ 0.56
IRF3-225ENST00000600022 DNAJC5GQ8N7S2 189 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms