RNA–Protein interactions for RNA: ENST00000599953.1

ZNF544-215, Transcript of zinc finger protein 544, humanhuman

TSL 5 BASIC

Gene ZNF544, Length 2,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-215ENST00000599953 PXDNLA1KZ92 1463 aa13.26□□□□□ -0.29
ZNF544-215ENST00000599953 KCNA6P17658 529 aa13.25□□□□□ -0.29
ZNF544-215ENST00000599953 NUCB2P80303 420 aa13.25□□□□□ -0.29
ZNF544-215ENST00000599953 XRCC6P12956 609 aaKnown RBP eCLIP13.25□□□□□ -0.29
ZNF544-215ENST00000599953 PDE1AP54750 535 aa13.25□□□□□ -0.29
ZNF544-215ENST00000599953 CLEC17AQ6ZS10 378 aa13.25□□□□□ -0.29
ZNF544-215ENST00000599953 LRRCC1Q9C099 1032 aa13.25□□□□□ -0.29
ZNF544-215ENST00000599953 FOXD4L1Q9NU39 408 aa13.25□□□□□ -0.29
ZNF544-215ENST00000599953 NWD1Q149M9 1564 aa13.24□□□□□ -0.29
ZNF544-215ENST00000599953 CWC22Q9HCG8 908 aaKnown RBP13.24□□□□□ -0.29
ZNF544-215ENST00000599953 MARF1Q9Y4F3 1742 aaKnown RBP13.23□□□□□ -0.29
ZNF544-215ENST00000599953 ATP8B2P98198 1209 aa13.23□□□□□ -0.29
ZNF544-215ENST00000599953 SRCIN1Q9C0H9 1055 aa13.23□□□□□ -0.29
ZNF544-215ENST00000599953 N4BP2Q86UW6 1770 aaPredicted RBP13.23□□□□□ -0.29
ZNF544-215ENST00000599953 NUTM2GQ5VZR2 741 aa13.23□□□□□ -0.29
ZNF544-215ENST00000599953 IL17REQ8NFR9 667 aa13.23□□□□□ -0.29
ZNF544-215ENST00000599953 MCCP23508 829 aa13.22□□□□□ -0.29
ZNF544-215ENST00000599953 C14orf37Q86TY3 774 aa13.22□□□□□ -0.29
ZNF544-215ENST00000599953 ARXQ96QS3 562 aa13.22□□□□□ -0.29
ZNF544-215ENST00000599953 PHF8Q9UPP1 1060 aa13.22□□□□□ -0.29
ZNF544-215ENST00000599953 EXOC6BQ9Y2D4 811 aa13.22□□□□□ -0.29
ZNF544-215ENST00000599953 MX1P20591 662 aa13.22□□□□□ -0.29
ZNF544-215ENST00000599953 LTV1Q96GA3 475 aaPredicted RBP13.22□□□□□ -0.29
ZNF544-215ENST00000599953 GRPEL1Q9HAV7 217 aa13.22□□□□□ -0.29
ZNF544-215ENST00000599953 IBTKQ9P2D0 1353 aaPredicted RBP13.21□□□□□ -0.29
ZNF544-215ENST00000599953 UBTFL1P0CB47 393 aaPredicted RBP13.21□□□□□ -0.29
ZNF544-215ENST00000599953 SSFA2P28290 1259 aa13.21□□□□□ -0.29
ZNF544-215ENST00000599953 HDGFL1Q5TGJ6 251 aa13.21□□□□□ -0.29
ZNF544-215ENST00000599953 IP6K1Q92551 441 aa13.2□□□□□ -0.3
ZNF544-215ENST00000599953 AOX1Q06278 1338 aa13.2□□□□□ -0.3
ZNF544-215ENST00000599953 SALL3Q9BXA9 1300 aa13.2□□□□□ -0.3
ZNF544-215ENST00000599953 HOXB7P09629 217 aa13.2□□□□□ -0.3
ZNF544-215ENST00000599953 MCM2P49736 904 aa13.2□□□□□ -0.3
ZNF544-215ENST00000599953 KCNH5Q8NCM2 988 aa13.2□□□□□ -0.3
ZNF544-215ENST00000599953 NECTIN2Q92692 538 aa13.2□□□□□ -0.3
ZNF544-215ENST00000599953 BAG4O95429 457 aaKnown RBP13.19□□□□□ -0.3
ZNF544-215ENST00000599953 LRRFIP2Q9Y608 721 aaKnown RBP13.19□□□□□ -0.3
ZNF544-215ENST00000599953 CEMIPQ8WUJ3 1361 aa13.19□□□□□ -0.3
ZNF544-215ENST00000599953 LTN1O94822 1766 aa13.19□□□□□ -0.3
ZNF544-215ENST00000599953 RAB11FIP3O75154 756 aa13.19□□□□□ -0.3
ZNF544-215ENST00000599953 STAP2Q9UGK3 403 aa13.19□□□□□ -0.3
ZNF544-215ENST00000599953 PNMA6EA0A0J9YXQ4 647 aa13.18□□□□□ -0.3
ZNF544-215ENST00000599953 KLHL40Q2TBA0 621 aa13.18□□□□□ -0.3
ZNF544-215ENST00000599953 ANKLE2Q86XL3 938 aa13.18□□□□□ -0.3
ZNF544-215ENST00000599953 ESYT1Q9BSJ8 1104 aa13.18□□□□□ -0.3
ZNF544-215ENST00000599953 ADGRL3Q9HAR2 1447 aa13.18□□□□□ -0.3
ZNF544-215ENST00000599953 EPB41L2O43491 1005 aaKnown RBP13.18□□□□□ -0.3
ZNF544-215ENST00000599953 ANAPC15P60006 121 aa13.18□□□□□ -0.3
ZNF544-215ENST00000599953 TRIM6-TRIM34B2RNG4 842 aa13.17□□□□□ -0.3
ZNF544-215ENST00000599953 USP44Q9H0E7 712 aa13.17□□□□□ -0.3
ZNF544-215ENST00000599953 DDX49Q9Y6V7 483 aaKnown RBP13.17□□□□□ -0.3
ZNF544-215ENST00000599953 NFAT5O94916 1531 aa13.17□□□□□ -0.3
ZNF544-215ENST00000599953 CYP2E1P05181 493 aaPredicted RBP13.16□□□□□ -0.3
ZNF544-215ENST00000599953 USHBP1Q8N6Y0 703 aa13.16□□□□□ -0.3
ZNF544-215ENST00000599953 SSH3Q8TE77 659 aa13.16□□□□□ -0.3
ZNF544-215ENST00000599953 PANK2Q9BZ23 570 aa13.16□□□□□ -0.3
ZNF544-215ENST00000599953 CHD2O14647 1828 aaKnown RBP13.16□□□□□ -0.3
ZNF544-215ENST00000599953 MED1Q15648 1581 aaPredicted RBP13.16□□□□□ -0.3
ZNF544-215ENST00000599953 PSME1Q06323 249 aa13.16□□□□□ -0.3
ZNF544-215ENST00000599953 RILPL2Q969X0 211 aa13.16□□□□□ -0.3
ZNF544-215ENST00000599953 CHMLP26374 656 aa13.15□□□□□ -0.3
ZNF544-215ENST00000599953 EIF4A1P60842 406 aaKnown RBP13.15□□□□□ -0.3
ZNF544-215ENST00000599953 TUBGCP6Q96RT7 1819 aa13.15□□□□□ -0.3
ZNF544-215ENST00000599953 TEFQ10587 303 aa13.15□□□□□ -0.3
ZNF544-215ENST00000599953 AMOTQ4VCS5 1084 aa13.15□□□□□ -0.3
ZNF544-215ENST00000599953 PLEKHO1Q53GL0 409 aaPredicted RBP13.15□□□□□ -0.3
ZNF544-215ENST00000599953 HSP90AB4PQ58FF6 505 aa13.15□□□□□ -0.3
ZNF544-215ENST00000599953 AKAP4Q5JQC9 854 aa13.15□□□□□ -0.3
ZNF544-215ENST00000599953 PHRF1Q9P1Y6 1649 aaKnown RBP13.15□□□□□ -0.3
ZNF544-215ENST00000599953 NEK4P51957 841 aa13.14□□□□□ -0.31
ZNF544-215ENST00000599953 MCTP1Q6DN14 999 aa13.14□□□□□ -0.31
ZNF544-215ENST00000599953 NCAPD2Q15021 1401 aa13.14□□□□□ -0.31
ZNF544-215ENST00000599953 EIF2S2P20042 333 aaKnown RBP13.14□□□□□ -0.31
ZNF544-215ENST00000599953 POLA2Q14181 598 aa13.14□□□□□ -0.31
ZNF544-215ENST00000599953 NBPF6Q5VWK0 638 aa13.14□□□□□ -0.31
ZNF544-215ENST00000599953 TSHZ3Q63HK5 1081 aa13.14□□□□□ -0.31
ZNF544-215ENST00000599953 KIF1BPQ96EK5 621 aa13.14□□□□□ -0.31
ZNF544-215ENST00000599953 NBPF4Q96M43 638 aa13.14□□□□□ -0.31
ZNF544-215ENST00000599953 PHAXQ9H814 394 aaKnown RBP13.14□□□□□ -0.31
ZNF544-215ENST00000599953 ANO2Q9NQ90 1003 aa13.14□□□□□ -0.31
ZNF544-215ENST00000599953 KDM3BQ7LBC6 1761 aa13.13□□□□□ -0.31
ZNF544-215ENST00000599953 ESCO1Q5FWF5 840 aa13.13□□□□□ -0.31
ZNF544-215ENST00000599953 PPP1R42Q7Z4L9 355 aa13.13□□□□□ -0.31
ZNF544-215ENST00000599953 DNAAF4Q8WXU2 420 aa13.13□□□□□ -0.31
ZNF544-215ENST00000599953 ANP32BQ92688 251 aaKnown RBP13.13□□□□□ -0.31
ZNF544-215ENST00000599953 HDAC5Q9UQL6 1122 aa13.13□□□□□ -0.31
ZNF544-215ENST00000599953 LMO7Q8WWI1 1683 aa13.13□□□□□ -0.31
ZNF544-215ENST00000599953 SURF6O75683 361 aaKnown RBP13.13□□□□□ -0.31
ZNF544-215ENST00000599953 ZNF530Q6P9A1 599 aaPredicted RBP13.13□□□□□ -0.31
ZNF544-215ENST00000599953 OVOS2A0A0G2JMS6 1433 aa13.12□□□□□ -0.31
ZNF544-215ENST00000599953 BTBD11A6QL63 1104 aa13.12□□□□□ -0.31
ZNF544-215ENST00000599953 ZGPATQ8N5A5 531 aaKnown RBP13.12□□□□□ -0.31
ZNF544-215ENST00000599953 TRIM44Q96DX7 344 aaPredicted RBP13.12□□□□□ -0.31
ZNF544-215ENST00000599953 IL17RAQ96F46 866 aa13.12□□□□□ -0.31
ZNF544-215ENST00000599953 ZNF142P52746 1687 aaPredicted RBP13.12□□□□□ -0.31
ZNF544-215ENST00000599953 SRGAP3O43295 1099 aa13.11□□□□□ -0.31
ZNF544-215ENST00000599953 C1orf141Q5JVX7 400 aa13.11□□□□□ -0.31
ZNF544-215ENST00000599953 RHPN1Q8TCX5 695 aa13.11□□□□□ -0.31
ZNF544-215ENST00000599953 INTS4Q96HW7 963 aaKnown RBP13.11□□□□□ -0.31
ZNF544-215ENST00000599953 TMX3Q96JJ7 454 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms