RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 U2AF1Q01081 240 aaKnown RBP eCLIP37.69■■■■□ 3.62
ZNF558-206ENST00000599938 MRC1P22897 1456 aa37.69■■■■□ 3.62
ZNF558-206ENST00000599938 PTGER2P43116 358 aa37.68■■■■□ 3.62
ZNF558-206ENST00000599938 NFATC2IPQ8NCF5 419 aa37.68■■■■□ 3.62
ZNF558-206ENST00000599938 RSPH6AQ9H0K4 717 aa37.68■■■■□ 3.62
ZNF558-206ENST00000599938 ADAMTS7Q9UKP4 1686 aa37.68■■■■□ 3.62
ZNF558-206ENST00000599938 PRKAR2BP31323 418 aa37.67■■■■□ 3.62
ZNF558-206ENST00000599938 ATP6V1AP38606 617 aa37.67■■■■□ 3.62
ZNF558-206ENST00000599938 GAS2L2Q8NHY3 880 aa37.67■■■■□ 3.62
ZNF558-206ENST00000599938 AK7Q96M32 723 aa37.67■■■■□ 3.62
ZNF558-206ENST00000599938 LINC00116Q8NCU8 138 aa37.66■■■■□ 3.62
ZNF558-206ENST00000599938 RNMTO43148 476 aaKnown RBP37.65■■■■□ 3.62
ZNF558-206ENST00000599938 ITPK1Q13572 414 aa37.65■■■■□ 3.62
ZNF558-206ENST00000599938 SLC16A10Q8TF71 515 aa37.65■■■■□ 3.62
ZNF558-206ENST00000599938 RBM42Q9BTD8 480 aaKnown RBP37.65■■■■□ 3.62
ZNF558-206ENST00000599938 LGR6Q9HBX8 967 aa37.65■■■■□ 3.62
ZNF558-206ENST00000599938 ZNF831Q5JPB2 1677 aa37.65■■■■□ 3.62
ZNF558-206ENST00000599938 MAP3K5Q99683 1374 aa37.65■■■■□ 3.62
ZNF558-206ENST00000599938 RALBP1Q15311 655 aa37.64■■■■□ 3.62
ZNF558-206ENST00000599938 UBR3Q6ZT12 1888 aa37.63■■■■□ 3.61
ZNF558-206ENST00000599938 SLC52A2Q9HAB3 445 aa37.63■■■■□ 3.61
ZNF558-206ENST00000599938 MSH5O43196 834 aa37.62■■■■□ 3.61
ZNF558-206ENST00000599938 COL23A1Q86Y22 540 aaPredicted RBP37.61■■■■□ 3.61
ZNF558-206ENST00000599938 SGIP1Q9BQI5 828 aa37.6■■■■□ 3.61
ZNF558-206ENST00000599938 SLC4A9Q96Q91 983 aa37.59■■■■□ 3.61
ZNF558-206ENST00000599938 COL5A3P25940 1745 aaPredicted RBP37.58■■■■□ 3.61
ZNF558-206ENST00000599938 FLAD1Q8NFF5 587 aa37.58■■■■□ 3.61
ZNF558-206ENST00000599938 PHACTR3Q96KR7 559 aa37.58■■■■□ 3.61
ZNF558-206ENST00000599938 GNAT3A8MTJ3 354 aa37.57■■■■□ 3.6
ZNF558-206ENST00000599938 PTCD1O75127 700 aaKnown RBP37.57■■■■□ 3.6
ZNF558-206ENST00000599938 FCHSD2O94868 740 aa37.57■■■■□ 3.6
ZNF558-206ENST00000599938 COL24A1Q17RW2 1714 aa37.57■■■■□ 3.6
ZNF558-206ENST00000599938 PHF14O94880 888 aa37.55■■■■□ 3.6
ZNF558-206ENST00000599938 AMIGO3Q86WK7 504 aa37.55■■■■□ 3.6
ZNF558-206ENST00000599938 GNPATO15228 680 aa37.54■■■■□ 3.6
ZNF558-206ENST00000599938 POLD1P28340 1107 aa37.53■■■■□ 3.6
ZNF558-206ENST00000599938 CICQ96RK0 1608 aaPredicted RBP37.52■■■■□ 3.6
ZNF558-206ENST00000599938 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP37.52■■■■□ 3.6
ZNF558-206ENST00000599938 TJP1Q07157 1748 aa37.52■■■■□ 3.6
ZNF558-206ENST00000599938 SSFA2P28290 1259 aa37.51■■■■□ 3.6
ZNF558-206ENST00000599938 ARXQ96QS3 562 aa37.51■■■■□ 3.6
ZNF558-206ENST00000599938 MYBBP1AQ9BQG0 1328 aaKnown RBP37.51■■■■□ 3.6
ZNF558-206ENST00000599938 TEFQ10587 303 aa37.49■■■■□ 3.59
ZNF558-206ENST00000599938 SMIM5Q71RC9 77 aa37.49■■■■□ 3.59
ZNF558-206ENST00000599938 IL17REQ8NFR9 667 aa37.49■■■■□ 3.59
ZNF558-206ENST00000599938 SIPA1L3O60292 1781 aaPredicted RBP37.48■■■■□ 3.59
ZNF558-206ENST00000599938 CNTNAP4Q9C0A0 1308 aa37.48■■■■□ 3.59
ZNF558-206ENST00000599938 SLC39A6Q13433 755 aa37.48■■■■□ 3.59
ZNF558-206ENST00000599938 MSL1Q68DK7 614 aa37.48■■■■□ 3.59
ZNF558-206ENST00000599938 KCPQ6ZWJ8 1503 aa37.47■■■■□ 3.59
ZNF558-206ENST00000599938 FHDC1Q9C0D6 1143 aaPredicted RBP37.46■■■■□ 3.59
ZNF558-206ENST00000599938 UBR2Q8IWV8 1755 aa37.45■■■■□ 3.59
ZNF558-206ENST00000599938 CEMIPQ8WUJ3 1361 aa37.45■■■■□ 3.59
ZNF558-206ENST00000599938 NEFMP07197 916 aa37.44■■■■□ 3.58
ZNF558-206ENST00000599938 RC3H1Q5TC82 1133 aaKnown RBP37.44■■■■□ 3.58
ZNF558-206ENST00000599938 MYH14Q7Z406 1995 aaKnown RBP37.44■■■■□ 3.58
ZNF558-206ENST00000599938 RTCBQ9Y3I0 505 aaKnown RBP37.43■■■■□ 3.58
ZNF558-206ENST00000599938 TTC5Q8N0Z6 440 aa37.41■■■■□ 3.58
ZNF558-206ENST00000599938 RTF1Q92541 710 aaKnown RBP37.41■■■■□ 3.58
ZNF558-206ENST00000599938 CRKLP46109 303 aaKnown RBP37.39■■■■□ 3.58
ZNF558-206ENST00000599938 SYT17Q9BSW7 474 aa37.39■■■■□ 3.58
ZNF558-206ENST00000599938 PRKRIP1Q9H875 184 aaPredicted RBP37.38■■■■□ 3.57
ZNF558-206ENST00000599938 DNAJC10Q8IXB1 793 aa37.37■■■■□ 3.57
ZNF558-206ENST00000599938 KLHL34Q8N239 644 aa37.37■■■■□ 3.57
ZNF558-206ENST00000599938 ADRA2BP18089 450 aa37.36■■■■□ 3.57
ZNF558-206ENST00000599938 TRAPPC3LQ5T215 181 aa37.36■■■■□ 3.57
ZNF558-206ENST00000599938 MCM10Q7L590 875 aa37.36■■■■□ 3.57
ZNF558-206ENST00000599938 PLEKHF1Q96S99 279 aa37.36■■■■□ 3.57
ZNF558-206ENST00000599938 PNNQ9H307 717 aaKnown RBP37.36■■■■□ 3.57
ZNF558-206ENST00000599938 MAPK8IP3Q9UPT6 1336 aa37.36■■■■□ 3.57
ZNF558-206ENST00000599938 RPS6KA4O75676 772 aa37.35■■■■□ 3.57
ZNF558-206ENST00000599938 DLG5Q8TDM6 1919 aa37.35■■■■□ 3.57
ZNF558-206ENST00000599938 C4AP0C0L4 1744 aa37.35■■■■□ 3.57
ZNF558-206ENST00000599938 ZNF790Q6PG37 636 aa37.34■■■■□ 3.57
ZNF558-206ENST00000599938 HTATSF1O43719 755 aaKnown RBP37.33■■■■□ 3.57
ZNF558-206ENST00000599938 VSIG10Q8N0Z9 540 aa37.33■■■■□ 3.57
ZNF558-206ENST00000599938 ZNF316A6NFI3 1004 aaPredicted RBP37.32■■■■□ 3.56
ZNF558-206ENST00000599938 BTBD11A6QL63 1104 aa37.31■■■■□ 3.56
ZNF558-206ENST00000599938 DCTN1Q14203 1278 aa37.31■■■■□ 3.56
ZNF558-206ENST00000599938 ARHGEF1Q92888 912 aaKnown RBP37.3■■■■□ 3.56
ZNF558-206ENST00000599938 CCDC87Q9NVE4 849 aa37.3■■■■□ 3.56
ZNF558-206ENST00000599938 DCAF8L1A6NGE4 600 aa37.29■■■■□ 3.56
ZNF558-206ENST00000599938 NFE2L2Q16236 605 aa37.29■■■■□ 3.56
ZNF558-206ENST00000599938 ZNF496Q96IT1 587 aaPredicted RBP37.29■■■■□ 3.56
ZNF558-206ENST00000599938 CYP19A1P11511 503 aaPredicted RBP37.28■■■■□ 3.56
ZNF558-206ENST00000599938 RFC4P35249 363 aa37.28■■■■□ 3.56
ZNF558-206ENST00000599938 INTS5Q6P9B9 1019 aaKnown RBP37.28■■■■□ 3.56
ZNF558-206ENST00000599938 HEG1Q9ULI3 1381 aa37.28■■■■□ 3.56
ZNF558-206ENST00000599938 WDR43Q15061 677 aaKnown RBP eCLIP37.25■■■■□ 3.55
ZNF558-206ENST00000599938 FMNL2Q96PY5 1086 aa37.25■■■■□ 3.55
ZNF558-206ENST00000599938 SOS1Q07889 1333 aaPredicted RBP37.22■■■■□ 3.55
ZNF558-206ENST00000599938 KCNQ3O43525 872 aa37.22■■■■□ 3.55
ZNF558-206ENST00000599938 ZBTB1Q9Y2K1 713 aa37.22■■■■□ 3.55
ZNF558-206ENST00000599938 STARD3NLO95772 234 aa37.21■■■■□ 3.55
ZNF558-206ENST00000599938 GYS1P13807 737 aa37.19■■■■□ 3.54
ZNF558-206ENST00000599938 NLGN2Q8NFZ4 835 aa37.19■■■■□ 3.54
ZNF558-206ENST00000599938 USP42Q9H9J4 1324 aaKnown RBP37.18■■■■□ 3.54
ZNF558-206ENST00000599938 MMP10P09238 476 aa37.18■■■■□ 3.54
ZNF558-206ENST00000599938 NLGN1Q8N2Q7 840 aa37.18■■■■□ 3.54
ZNF558-206ENST00000599938 TEX13AQ9BXU3 409 aaPredicted RBP37.18■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms