RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 EYA1Q99502 592 aa17.17■□□□□ 0.34
HOMER3-211ENST00000599808 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.17■□□□□ 0.34
HOMER3-211ENST00000599808 WASHC2AQ641Q2 1341 aa17.17■□□□□ 0.34
HOMER3-211ENST00000599808 PHKG2P15735 406 aa17.16■□□□□ 0.34
HOMER3-211ENST00000599808 ATG3Q9NT62 314 aa17.16■□□□□ 0.34
HOMER3-211ENST00000599808 CDCA8Q53HL2 280 aa17.15■□□□□ 0.34
HOMER3-211ENST00000599808 IFNL2Q8IZJ0 200 aa17.15■□□□□ 0.34
HOMER3-211ENST00000599808 ZNF831Q5JPB2 1677 aa17.15■□□□□ 0.34
HOMER3-211ENST00000599808 COL5A3P25940 1745 aaPredicted RBP17.15■□□□□ 0.34
HOMER3-211ENST00000599808 KDRP35968 1356 aa17.14■□□□□ 0.33
HOMER3-211ENST00000599808 C10orf71Q711Q0 1435 aa17.13■□□□□ 0.33
HOMER3-211ENST00000599808 MYH14Q7Z406 1995 aaKnown RBP17.13■□□□□ 0.33
HOMER3-211ENST00000599808 C4AP0C0L4 1744 aa17.13■□□□□ 0.33
HOMER3-211ENST00000599808 A0A0G2JLW4 131 aa17.13■□□□□ 0.33
HOMER3-211ENST00000599808 APLP1P51693 650 aa17.13■□□□□ 0.33
HOMER3-211ENST00000599808 TGFB2P61812 414 aa17.13■□□□□ 0.33
HOMER3-211ENST00000599808 SLC4A9Q96Q91 983 aa17.13■□□□□ 0.33
HOMER3-211ENST00000599808 BCS1LQ9Y276 419 aa17.13■□□□□ 0.33
HOMER3-211ENST00000599808 TOMM70O94826 608 aa17.12■□□□□ 0.33
HOMER3-211ENST00000599808 TRAPPC3LQ5T215 181 aa17.12■□□□□ 0.33
HOMER3-211ENST00000599808 RTCBQ9Y3I0 505 aaKnown RBP17.12■□□□□ 0.33
HOMER3-211ENST00000599808 ARFGEF1Q9Y6D6 1849 aa17.12■□□□□ 0.33
HOMER3-211ENST00000599808 NLGN1Q8N2Q7 840 aa17.11■□□□□ 0.33
HOMER3-211ENST00000599808 DNAJC5GQ8N7S2 189 aa17.11■□□□□ 0.33
HOMER3-211ENST00000599808 POLKQ9UBT6 870 aa17.11■□□□□ 0.33
HOMER3-211ENST00000599808 ARHGAP27Q6ZUM4 889 aa17.1■□□□□ 0.33
HOMER3-211ENST00000599808 ARHGEF1Q92888 912 aaKnown RBP17.1■□□□□ 0.33
HOMER3-211ENST00000599808 NMRK2Q9NPI5 230 aa17.1■□□□□ 0.33
HOMER3-211ENST00000599808 WDR90Q96KV7 1748 aa17.1■□□□□ 0.33
HOMER3-211ENST00000599808 DPEP1P16444 411 aa17.09■□□□□ 0.33
HOMER3-211ENST00000599808 EIF4A2Q14240 407 aaKnown RBP17.09■□□□□ 0.33
HOMER3-211ENST00000599808 RBM42Q9BTD8 480 aaKnown RBP17.09■□□□□ 0.33
HOMER3-211ENST00000599808 CCDC87Q9NVE4 849 aa17.09■□□□□ 0.33
HOMER3-211ENST00000599808 FCHSD2O94868 740 aa17.08■□□□□ 0.32
HOMER3-211ENST00000599808 GYS1P13807 737 aa17.08■□□□□ 0.32
HOMER3-211ENST00000599808 ADRA2BP18089 450 aa17.08■□□□□ 0.32
HOMER3-211ENST00000599808 RC3H1Q5TC82 1133 aaKnown RBP17.08■□□□□ 0.32
HOMER3-211ENST00000599808 PLEKHG2Q9H7P9 1386 aa17.07■□□□□ 0.32
HOMER3-211ENST00000599808 CNTNAP4Q9C0A0 1308 aa17.07■□□□□ 0.32
HOMER3-211ENST00000599808 ERVV-2B6SEH9 535 aa17.07■□□□□ 0.32
HOMER3-211ENST00000599808 RPS6KA4O75676 772 aa17.06■□□□□ 0.32
HOMER3-211ENST00000599808 KCNA3P22001 575 aa17.06■□□□□ 0.32
HOMER3-211ENST00000599808 RFC4P35249 363 aa17.06■□□□□ 0.32
HOMER3-211ENST00000599808 PARP3Q9Y6F1 533 aa17.06■□□□□ 0.32
HOMER3-211ENST00000599808 SBF1O95248 1867 aa17.05■□□□□ 0.32
HOMER3-211ENST00000599808 KDM6AO15550 1401 aaPredicted RBP17.04■□□□□ 0.32
HOMER3-211ENST00000599808 TNNT2P45379 298 aaPredicted RBP17.04■□□□□ 0.32
HOMER3-211ENST00000599808 C9orf131Q5VYM1 1079 aa17.04■□□□□ 0.32
HOMER3-211ENST00000599808 DCAF5Q96JK2 942 aa17.04■□□□□ 0.32
HOMER3-211ENST00000599808 HSP90AB1P08238 724 aaKnown RBP17.03■□□□□ 0.32
HOMER3-211ENST00000599808 RBM46Q8TBY0 533 aaKnown RBP17.03■□□□□ 0.32
HOMER3-211ENST00000599808 TJP1Q07157 1748 aa17.02■□□□□ 0.32
HOMER3-211ENST00000599808 CABP4P57796 275 aa17.02■□□□□ 0.32
HOMER3-211ENST00000599808 PCNTO95613 3336 aa17.01■□□□□ 0.31
HOMER3-211ENST00000599808 KCPQ6ZWJ8 1503 aa17.01■□□□□ 0.31
HOMER3-211ENST00000599808 HTRA3P83110 453 aa17.01■□□□□ 0.31
HOMER3-211ENST00000599808 ZNF530Q6P9A1 599 aaPredicted RBP17.01■□□□□ 0.31
HOMER3-211ENST00000599808 PIM2Q9P1W9 311 aa17.01■□□□□ 0.31
HOMER3-211ENST00000599808 SRP68Q9UHB9 627 aaKnown RBP17.01■□□□□ 0.31
HOMER3-211ENST00000599808 PTCD1O75127 700 aaKnown RBP17■□□□□ 0.31
HOMER3-211ENST00000599808 CRKLP46109 303 aaKnown RBP17■□□□□ 0.31
HOMER3-211ENST00000599808 DDR1Q08345 913 aa17■□□□□ 0.31
HOMER3-211ENST00000599808 FKBP8Q14318 412 aa17■□□□□ 0.31
HOMER3-211ENST00000599808 PLEKHO1Q53GL0 409 aaPredicted RBP17■□□□□ 0.31
HOMER3-211ENST00000599808 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
HOMER3-211ENST00000599808 TNRC6CQ9HCJ0 1690 aaKnown RBP17■□□□□ 0.31
HOMER3-211ENST00000599808 ADAMTS7Q9UKP4 1686 aa17■□□□□ 0.31
HOMER3-211ENST00000599808 DALRD3Q5D0E6 543 aaKnown RBP16.99■□□□□ 0.31
HOMER3-211ENST00000599808 KLRG1Q96E93 195 aa16.99■□□□□ 0.31
HOMER3-211ENST00000599808 SCN11AQ9UI33 1791 aa16.99■□□□□ 0.31
HOMER3-211ENST00000599808 USP42Q9H9J4 1324 aaKnown RBP16.98■□□□□ 0.31
HOMER3-211ENST00000599808 MTHFSP49914 203 aa16.98■□□□□ 0.31
HOMER3-211ENST00000599808 FSTL1Q12841 308 aa16.98■□□□□ 0.31
HOMER3-211ENST00000599808 RNF181Q9P0P0 153 aa16.98■□□□□ 0.31
HOMER3-211ENST00000599808 AFDNP55196 1824 aaKnown RBP16.98■□□□□ 0.31
HOMER3-211ENST00000599808 KDM2BQ8NHM5 1336 aa16.97■□□□□ 0.31
HOMER3-211ENST00000599808 CHRNA5P30532 468 aa16.97■□□□□ 0.31
HOMER3-211ENST00000599808 AMOTQ4VCS5 1084 aa16.97■□□□□ 0.31
HOMER3-211ENST00000599808 AEBP1Q8IUX7 1158 aa16.97■□□□□ 0.31
HOMER3-211ENST00000599808 NFATC2IPQ8NCF5 419 aa16.97■□□□□ 0.31
HOMER3-211ENST00000599808 POLR3GLQ9BT43 218 aa16.97■□□□□ 0.31
HOMER3-211ENST00000599808 JMYQ8N9B5 988 aa16.96■□□□□ 0.31
HOMER3-211ENST00000599808 RRAGCQ9HB90 399 aa16.96■□□□□ 0.31
HOMER3-211ENST00000599808 CCDC88AQ3V6T2 1871 aa16.96■□□□□ 0.31
HOMER3-211ENST00000599808 VIRMAQ69YN4 1812 aaKnown RBP16.96■□□□□ 0.3
HOMER3-211ENST00000599808 POLRMTO00411 1230 aaKnown RBP16.95■□□□□ 0.3
HOMER3-211ENST00000599808 C1orf141Q5JVX7 400 aa16.95■□□□□ 0.3
HOMER3-211ENST00000599808 COL13A1Q5TAT6 717 aaPredicted RBP16.95■□□□□ 0.3
HOMER3-211ENST00000599808 INTS5Q6P9B9 1019 aaKnown RBP16.95■□□□□ 0.3
HOMER3-211ENST00000599808 TM4SF1P30408 202 aa16.94■□□□□ 0.3
HOMER3-211ENST00000599808 DLEC1Q9Y238 1755 aa16.94■□□□□ 0.3
HOMER3-211ENST00000599808 NRXN2Q9P2S2 1712 aa16.92■□□□□ 0.3
HOMER3-211ENST00000599808 USPL1Q5W0Q7 1092 aa16.91■□□□□ 0.3
HOMER3-211ENST00000599808 SULT6B1Q6IMI4 303 aa16.91■□□□□ 0.3
HOMER3-211ENST00000599808 ZPR1O75312 459 aa16.9■□□□□ 0.3
HOMER3-211ENST00000599808 RASSF7Q02833 373 aa16.9■□□□□ 0.3
HOMER3-211ENST00000599808 DNAJC10Q8IXB1 793 aa16.9■□□□□ 0.3
HOMER3-211ENST00000599808 SMC1BQ8NDV3 1235 aa16.9■□□□□ 0.3
HOMER3-211ENST00000599808 PANK3Q9H999 370 aa16.9■□□□□ 0.3
HOMER3-211ENST00000599808 SOS1Q07889 1333 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms