RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 COL3A1P02461 1466 aaPredicted RBP19.29■□□□□ 0.68
IRF3-224ENST00000599680 COL5A3P25940 1745 aaPredicted RBP19.29■□□□□ 0.68
IRF3-224ENST00000599680 FLAD1Q8NFF5 587 aa19.29■□□□□ 0.68
IRF3-224ENST00000599680 ARXQ96QS3 562 aa19.29■□□□□ 0.68
IRF3-224ENST00000599680 ATP6V1AP38606 617 aa19.28■□□□□ 0.68
IRF3-224ENST00000599680 AKAP4Q5JQC9 854 aa19.27■□□□□ 0.68
IRF3-224ENST00000599680 SGIP1Q9BQI5 828 aa19.27■□□□□ 0.68
IRF3-224ENST00000599680 RBM42Q9BTD8 480 aaKnown RBP19.27■□□□□ 0.68
IRF3-224ENST00000599680 FHDC1Q9C0D6 1143 aaPredicted RBP19.27■□□□□ 0.68
IRF3-224ENST00000599680 ATG3Q9NT62 314 aa19.27■□□□□ 0.68
IRF3-224ENST00000599680 COL23A1Q86Y22 540 aaPredicted RBP19.26■□□□□ 0.67
IRF3-224ENST00000599680 KLHL34Q8N239 644 aa19.26■□□□□ 0.67
IRF3-224ENST00000599680 PHF14O94880 888 aa19.24■□□□□ 0.67
IRF3-224ENST00000599680 NFATC2IPQ8NCF5 419 aa19.24■□□□□ 0.67
IRF3-224ENST00000599680 LINC00116Q8NCU8 138 aa19.24■□□□□ 0.67
IRF3-224ENST00000599680 SYT17Q9BSW7 474 aa19.23■□□□□ 0.67
IRF3-224ENST00000599680 NUDCQ9Y266 331 aa19.23■□□□□ 0.67
IRF3-224ENST00000599680 ADAMTS7Q9UKP4 1686 aa19.23■□□□□ 0.67
IRF3-224ENST00000599680 GNPATO15228 680 aa19.22■□□□□ 0.67
IRF3-224ENST00000599680 PPP2R1AP30153 589 aa19.22■□□□□ 0.67
IRF3-224ENST00000599680 ITPK1Q13572 414 aa19.22■□□□□ 0.67
IRF3-224ENST00000599680 MSL1Q68DK7 614 aa19.22■□□□□ 0.67
IRF3-224ENST00000599680 TJP1Q07157 1748 aa19.22■□□□□ 0.67
IRF3-224ENST00000599680 SSFA2P28290 1259 aa19.21■□□□□ 0.67
IRF3-224ENST00000599680 MTHFSDQ2M296 383 aaKnown RBP19.21■□□□□ 0.67
IRF3-224ENST00000599680 CICQ96RK0 1608 aaPredicted RBP19.21■□□□□ 0.67
IRF3-224ENST00000599680 MAP3K5Q99683 1374 aa19.2■□□□□ 0.66
IRF3-224ENST00000599680 CHD4Q14839 1912 aa19.2■□□□□ 0.66
IRF3-224ENST00000599680 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.2■□□□□ 0.66
IRF3-224ENST00000599680 PTCD1O75127 700 aaKnown RBP19.2■□□□□ 0.66
IRF3-224ENST00000599680 MYH14Q7Z406 1995 aaKnown RBP19.2■□□□□ 0.66
IRF3-224ENST00000599680 MRC1P22897 1456 aa19.2■□□□□ 0.66
IRF3-224ENST00000599680 RNMTO43148 476 aaKnown RBP19.19■□□□□ 0.66
IRF3-224ENST00000599680 SLC52A2Q9HAB3 445 aa19.19■□□□□ 0.66
IRF3-224ENST00000599680 SIPA1L3O60292 1781 aaPredicted RBP19.19■□□□□ 0.66
IRF3-224ENST00000599680 C4AP0C0L4 1744 aa19.18■□□□□ 0.66
IRF3-224ENST00000599680 GAS2L2Q8NHY3 880 aa19.18■□□□□ 0.66
IRF3-224ENST00000599680 LGR6Q9HBX8 967 aa19.18■□□□□ 0.66
IRF3-224ENST00000599680 UBR2Q8IWV8 1755 aa19.17■□□□□ 0.66
IRF3-224ENST00000599680 RTCBQ9Y3I0 505 aaKnown RBP19.17■□□□□ 0.66
IRF3-224ENST00000599680 U2AF1L5P0DN76 240 aaPredicted RBP19.16■□□□□ 0.66
IRF3-224ENST00000599680 U2AF1Q01081 240 aaKnown RBP eCLIP19.16■□□□□ 0.66
IRF3-224ENST00000599680 SMIM5Q71RC9 77 aa19.16■□□□□ 0.66
IRF3-224ENST00000599680 SLC4A9Q96Q91 983 aa19.16■□□□□ 0.66
IRF3-224ENST00000599680 GNAT3A8MTJ3 354 aa19.15■□□□□ 0.66
IRF3-224ENST00000599680 PRKAR2BP31323 418 aa19.15■□□□□ 0.66
IRF3-224ENST00000599680 RC3H1Q5TC82 1133 aaKnown RBP19.15■□□□□ 0.66
IRF3-224ENST00000599680 AMIGO3Q86WK7 504 aa19.15■□□□□ 0.66
IRF3-224ENST00000599680 CNTNAP4Q9C0A0 1308 aa19.15■□□□□ 0.66
IRF3-224ENST00000599680 DLG5Q8TDM6 1919 aa19.14■□□□□ 0.65
IRF3-224ENST00000599680 TEFQ10587 303 aa19.14■□□□□ 0.65
IRF3-224ENST00000599680 TRAPPC3LQ5T215 181 aa19.14■□□□□ 0.65
IRF3-224ENST00000599680 RSPH6AQ9H0K4 717 aa19.13■□□□□ 0.65
IRF3-224ENST00000599680 PELP1Q8IZL8 1130 aaKnown RBP19.12■□□□□ 0.65
IRF3-224ENST00000599680 TTC5Q8N0Z6 440 aa19.12■□□□□ 0.65
IRF3-224ENST00000599680 KCPQ6ZWJ8 1503 aa19.11■□□□□ 0.65
IRF3-224ENST00000599680 RPS6KA4O75676 772 aa19.11■□□□□ 0.65
IRF3-224ENST00000599680 NEFMP07197 916 aa19.11■□□□□ 0.65
IRF3-224ENST00000599680 ADRA2BP18089 450 aa19.11■□□□□ 0.65
IRF3-224ENST00000599680 YY1P25490 414 aa19.11■□□□□ 0.65
IRF3-224ENST00000599680 CRKLP46109 303 aaKnown RBP19.11■□□□□ 0.65
IRF3-224ENST00000599680 SLC39A6Q13433 755 aa19.11■□□□□ 0.65
IRF3-224ENST00000599680 GPR162Q16538 588 aa19.11■□□□□ 0.65
IRF3-224ENST00000599680 FCHSD2O94868 740 aa19.1■□□□□ 0.65
IRF3-224ENST00000599680 RFC4P35249 363 aa19.1■□□□□ 0.65
IRF3-224ENST00000599680 DDX10Q13206 875 aaKnown RBP19.1■□□□□ 0.65
IRF3-224ENST00000599680 PHACTR3Q96KR7 559 aa19.1■□□□□ 0.65
IRF3-224ENST00000599680 NLGN2Q8NFZ4 835 aa19.09■□□□□ 0.65
IRF3-224ENST00000599680 RTF1Q92541 710 aaKnown RBP19.08■□□□□ 0.64
IRF3-224ENST00000599680 ARHGEF1Q92888 912 aaKnown RBP19.08■□□□□ 0.64
IRF3-224ENST00000599680 DNAJC10Q8IXB1 793 aa19.07■□□□□ 0.64
IRF3-224ENST00000599680 IL17REQ8NFR9 667 aa19.07■□□□□ 0.64
IRF3-224ENST00000599680 CCDC87Q9NVE4 849 aa19.07■□□□□ 0.64
IRF3-224ENST00000599680 CD2APQ9Y5K6 639 aa19.07■□□□□ 0.64
IRF3-224ENST00000599680 KIF13BQ9NQT8 1826 aa19.07■□□□□ 0.64
IRF3-224ENST00000599680 RALBP1Q15311 655 aa19.06■□□□□ 0.64
IRF3-224ENST00000599680 NLGN1Q8N2Q7 840 aa19.06■□□□□ 0.64
IRF3-224ENST00000599680 MMP10P09238 476 aa19.05■□□□□ 0.64
IRF3-224ENST00000599680 VSIG10Q8N0Z9 540 aa19.05■□□□□ 0.64
IRF3-224ENST00000599680 N4BP2Q86UW6 1770 aaPredicted RBP19.04■□□□□ 0.64
IRF3-224ENST00000599680 CEMIPQ8WUJ3 1361 aa19.04■□□□□ 0.64
IRF3-224ENST00000599680 CYP19A1P11511 503 aaPredicted RBP19.03■□□□□ 0.64
IRF3-224ENST00000599680 INTS5Q6P9B9 1019 aaKnown RBP19.03■□□□□ 0.64
IRF3-224ENST00000599680 ZNF790Q6PG37 636 aa19.03■□□□□ 0.64
IRF3-224ENST00000599680 PNNQ9H307 717 aaKnown RBP19.03■□□□□ 0.64
IRF3-224ENST00000599680 BTBD11A6QL63 1104 aa19.02■□□□□ 0.64
IRF3-224ENST00000599680 STARD3NLO95772 234 aa19.02■□□□□ 0.64
IRF3-224ENST00000599680 GYS1P13807 737 aa19.02■□□□□ 0.64
IRF3-224ENST00000599680 ZEB1P37275 1124 aaPredicted RBP19.02■□□□□ 0.64
IRF3-224ENST00000599680 PARP3Q9Y6F1 533 aa19.02■□□□□ 0.64
IRF3-224ENST00000599680 ZPR1O75312 459 aa19.01■□□□□ 0.63
IRF3-224ENST00000599680 MCM10Q7L590 875 aa19.01■□□□□ 0.63
IRF3-224ENST00000599680 FMNL2Q96PY5 1086 aa19.01■□□□□ 0.63
IRF3-224ENST00000599680 HEG1Q9ULI3 1381 aa19.01■□□□□ 0.63
IRF3-224ENST00000599680 USP42Q9H9J4 1324 aaKnown RBP19■□□□□ 0.63
IRF3-224ENST00000599680 MAPK8IP3Q9UPT6 1336 aa19■□□□□ 0.63
IRF3-224ENST00000599680 HTATSF1O43719 755 aaKnown RBP19■□□□□ 0.63
IRF3-224ENST00000599680 ZNF496Q96IT1 587 aaPredicted RBP19■□□□□ 0.63
IRF3-224ENST00000599680 TEX13AQ9BXU3 409 aaPredicted RBP19■□□□□ 0.63
IRF3-224ENST00000599680 SRP68Q9UHB9 627 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms